Noi/NOTES/2012-4-26: Difference between revisions

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Line 7: Line 7:
| align="center" style="background:#f0f0f0;"|'''%'''
| align="center" style="background:#f0f0f0;"|'''%'''
|-
|-
| 10%FDR_10kb||378||50.94
| 10%FDR_10kb||378||50.94%
|-
|-
| 10%FDR_10-20kb||27||3.64
| 10%FDR_10-20kb||27||3.64%
|-
|-
| 10%FDR_20-30kb||21||2.83
| 10%FDR_20-30kb||21||2.83%
|-
|-
| 10%FDR_30-40kb||36||4.85
| 10%FDR_30-40kb||36||4.85%
|-
|-
| 10%FDR_40-50kb||2||0.27
| 10%FDR_40-50kb||2||0.27%
|-
|-
| 10%FDR_50kb-2Mb||278||37.47
| 10%FDR_50kb-2Mb||278||37.47%
|-
|-
| Total in 2Mb||742||
| Total in 2Mb||742||
Line 27: Line 27:
| align="center" style="background:#f0f0f0;"|'''%'''
| align="center" style="background:#f0f0f0;"|'''%'''
|-
|-
| minpval0.05_10kb||862||13.43
| minpval0.05_10kb||862||13.43%
|-
|-
| minpval0.05_10-20kb||124||1.93
| minpval0.05_10-20kb||124||1.93%
|-
|-
| minpval0.05_20-30kb||133||2.07
| minpval0.05_20-30kb||133||2.07%
|-
|-
| minpval0.05_30-40kb||108||1.68
| minpval0.05_30-40kb||108||1.68%
|-
|-
| minpval0.05_40-50kb||75||1.17
| minpval0.05_40-50kb||75||1.17%
|-
|-
| minpval0.05_50kb-2Mb||5,116||79.71
| minpval0.05_50kb-2Mb||5,116||79.71%
|-
|-
| Total in 2Mb||6,418||
| Total in 2Mb||6,418||
|}
|}

Revision as of 16:51, 26 April 2012

mQTL analysis on UCLA-SZ data set (no CpG-SNP)

  • Details will be filled later
  • Note: P-value of 10%FDR is p <= 1.636E−4
Associated CpG-SNP distance Number of assiciated CpG-SNP %
10%FDR_10kb 378 50.94%
10%FDR_10-20kb 27 3.64%
10%FDR_20-30kb 21 2.83%
10%FDR_30-40kb 36 4.85%
10%FDR_40-50kb 2 0.27%
10%FDR_50kb-2Mb 278 37.47%
Total in 2Mb 742
Associated CpG-SNP distance Number of assiciated CpG-SNP %
minpval0.05_10kb 862 13.43%
minpval0.05_10-20kb 124 1.93%
minpval0.05_20-30kb 133 2.07%
minpval0.05_30-40kb 108 1.68%
minpval0.05_40-50kb 75 1.17%
minpval0.05_50kb-2Mb 5,116 79.71%
Total in 2Mb 6,418