Blue:RNA-Seq Libraries: Difference between revisions

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| align="center" style="background:#f0f0f0;"|'''Library'''
| align="center" style="background:#f0f0f0;"|'''Library'''
| align="center" style="background:#f0f0f0;"|'''Experiment'''
| align="center" style="background:#f0f0f0;"|'''Experiment'''
| align="center" style="background:#f0f0f0;"|'''ID'''
| align="center" style="background:#f0f0f0;"|'''Sample'''
| align="center" style="background:#f0f0f0;"|'''Sample'''
| align="center" style="background:#f0f0f0;"|'''TSO'''
| align="center" style="background:#f0f0f0;"|'''TSO'''
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| align="center" style="background:#f0f0f0;"|'''Data Storage Location'''
| align="center" style="background:#f0f0f0;"|'''Data Storage Location'''
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|BL-mCherryNPC-N2id81_92-Apr24||[[Blue:RNA-Seq Libraries:04242013|04242013]]||hNPC lo/hi Pool||R04||RnaseIII||HL152||Lanes 6-8||/home/kunzhang/seqStore/130521_HL152
|BL-mCherryNPC-N2id81_92-Apr24||[[Blue:RNA-Seq Libraries:04242013|04242013]]||||hNPC lo/hi Pool||R04||RnaseIII||HL152||Lanes 6-8||/home/kunzhang/seqStore/130521_HL152
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|BL-UHRR-IVT-May28||[[Blue:RNA-Seq Libraries:05282013|05282013]]||UHRR||RL.IVT.N6/N9||RNaseIII||HL155||Lanes 1,2 (id1,2,4,5)||/home/kunzhang/seqStore/130627_HiSeq_RapidRun/BL-UHRR-IVT-May28
|BL-UHRR-IVT-May28||[[Blue:RNA-Seq Libraries:05282013|05282013]]||||UHRR||RL.IVT.N6/N9||RNaseIII||HL155||Lanes 1,2 (id1,2,4,5)||/home/kunzhang/seqStore/130627_HiSeq_RapidRun/BL-UHRR-IVT-May28
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|BL_mESC_SingleCell_0614||[[Blue:RNA-Seq Libraries:06142013|06142013]]||Single mESCs (60 cells)||R04 (one and two step)||RNaseIII, 94C 2min||HL155||Lane 8 (id81-84)||/home/kunzhang/seqStore/130628_HL155
|BL_mESC_SingleCell_0614||[[Blue:RNA-Seq Libraries:06142013|06142013]]||||Single mESCs (60 cells)||R04 (one and two step)||RNaseIII, 94C 2min||HL155||Lane 8 (id81-84)||/home/kunzhang/seqStore/130628_HL155
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|BL_mCherryNPC_0620||[[Blue:RNA-Seq Libraries:06202013|06202013]]||human NPC sorts CD184+CD44-||R04||RnaseIII||HL155||Lanes1,2 (id1-5, 11-12)||/home/kunzhang/seqStore/130628_HL155
|BL_mCherryNPC_0620||[[Blue:RNA-Seq Libraries:06202013|06202013]]||||human NPC sorts CD184+CD44-||R04||RnaseIII||HL155||Lanes1,2 (id1-5, 11-12)||/home/kunzhang/seqStore/130628_HL155
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|BL_mESC_SingleCell_0621||[[Blue:RNA-Seq Libraries:06212013|06212013]]||mESCs (34 cells)||R04 (one step)||94C 2min||HL155||Lane 8 (id13-18)||/home/kunzhang/seqStore/130628_HL155
|BL_mESC_SingleCell_0621||[[Blue:RNA-Seq Libraries:06212013|06212013]]||||mESCs (34 cells)||R04 (one step)||94C 2min||HL155||Lane 8 (id13-18)||/home/kunzhang/seqStore/130628_HL155
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|BL_mNPC_SingleCell_N2id81_Jul25||[[Blue:RNA-Seq Experiments:07252013|07252013]]||Single mNPCs (60)||R04||94C 2min||HL157||Lane 3 (id81)||/home/kunzhang/seqStore/130807_HL157  
|BL_mNPC_SingleCell_N2id81_Jul25||[[Blue:RNA-Seq Experiments:07252013|07252013]]||||Single mNPCs (60)||R04||94C 2min||HL157||Lane 3 (id81)||/home/kunzhang/seqStore/130807_HL157  
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|BL_mNPC_SingleCell_N2id82_Jul25||[[Blue:RNA-Seq Experiments:07252013|07252013]]||Single mNPCs (60)||R04||94C 2min||HL157||Lane 4 (id82)||/home/kunzhang/seqStore/130807_HL157
|BL_mNPC_SingleCell_N2id82_Jul25||[[Blue:RNA-Seq Experiments:07252013|07252013]]||||Single mNPCs (60)||R04||94C 2min||HL157||Lane 4 (id82)||/home/kunzhang/seqStore/130807_HL157
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|BL_huES8_SingleCell_N2id85_0820||[[Blue:RNA-Seq Experiments:08202013|08202013]]||Single huESCs (30)||R04||RNaseIII||HL161||Lane (id85)||/home/kunzhang/seqStore/131009_HL161
|BL_huES8_SingleCell_N2id85_0820||[[Blue:RNA-Seq Experiments:08202013|08202013]]||||Single huESCs (30)||R04||RNaseIII||HL161||Lane (id85)||/home/kunzhang/seqStore/131009_HL161
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|BL_huES8_SingleCell_N2id86_0820||[[Blue:RNA-Seq Experiments:08202013|08202013]]||Single huESCs (30)||R04||RNaseIII||HL161||Lane (id86)||/home/kunzhang/seqStore/131009_HL161
|BL_huES8_SingleCell_N2id86_0820||[[Blue:RNA-Seq Experiments:08202013|08202013]]||||Single huESCs (30)||R04||RNaseIII||HL161||Lane (id86)||/home/kunzhang/seqStore/131009_HL161
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|BL_huES8_SingleCell_N2id87-88_0820||[[Blue:RNA-Seq Experiments:08202013|08202013]]||250pg UHRR||R04||RNaseIII||HL161||Lane (id87,88)||/home/kunzhang/seqStore/131009_HL161
|BL_huES8_SingleCell_N2id87-88_0820||[[Blue:RNA-Seq Experiments:08202013|08202013]]||||250pg UHRR||R04||RNaseIII||HL161||Lane (id87,88)||/home/kunzhang/seqStore/131009_HL161
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|BL_UHRR_N2id9-12_0910||[[Blue:RNA-Seq Experiments:09102013|09102013]]||500pg UHRR||R04-R05||RNaseIII, 94C 2min||HL160||Lane 3 - 20% (id9-12)||/home/kunzhang/seqStore/130925_HL160
|BL_UHRR_N2id9-12_0910||[[Blue:RNA-Seq Experiments:09102013|09102013]]||||500pg UHRR||R04-R05||RNaseIII, 94C 2min||HL160||Lane 3 - 20% (id9-12)||/home/kunzhang/seqStore/130925_HL160
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|BL_UHRR_N2id13-14_0910||[[Blue:RNA-Seq Experiments:09102013|09102013]]||500pg UHRR||Smarter||RNaseIII, 94C 2min||HL161||Lane (id13, 14)||/home/kunzhang/seqStore/131009_HL161
|BL_UHRR_N2id13-14_0910||[[Blue:RNA-Seq Experiments:09102013|09102013]]||||500pg UHRR||Smarter||RNaseIII, 94C 2min||HL161||Lane (id13, 14)||/home/kunzhang/seqStore/131009_HL161
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|BL_UHRR_N2id9,12_Sept18||[[Blue:RNA-Seq Experiments:09182013|09182013]]||1ng UHRR||STRT_V2_3,R03||RNaseIII||HL161||Lane (id9, 12)||/home/kunzhang/seqStore/131009_HL161
|BL_UHRR_N2id9,12_Sept18||[[Blue:RNA-Seq Experiments:09182013|09182013]]||||1ng UHRR||STRT_V2_3,R03||RNaseIII||HL161||Lane (id9, 12)||/home/kunzhang/seqStore/131009_HL161
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|BL_UHRR/HuNu_N2id15-20_Sept27||[[Blue:RNA-Seq Experiments:09272013|09272013]]||1ng UHRR, HuNu, msLCM||R06||RNAseIII (5-10min)||HL161||Lane (id15-20)||/home/kunzhang/seqStore/131009_HL161
|BL_UHRR/HuNu_N2id15-20_Sept27||[[Blue:RNA-Seq Experiments:09272013|09272013]]||||1ng UHRR, HuNu, msLCM||R06||RNAseIII (5-10min)||HL161||Lane (id15-20)||/home/kunzhang/seqStore/131009_HL161
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|BL_UHRR/HuNu_N2id21-28_Sept27||[[Blue:RNA-Seq Experiments:09272013|09272013]]||10pg-100pg UHRR||R06||RNaseIII (5-10min)||HL161||Lane (id21-28)||/home/kunzhang/seqStore/131009_HL161
|BL_UHRR/HuNu_N2id21-28_Sept27||[[Blue:RNA-Seq Experiments:09272013|09272013]]||||10pg-100pg UHRR||R06||RNaseIII (5-10min)||HL161||Lane (id21-28)||/home/kunzhang/seqStore/131009_HL161
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|BL_huES8_SingleCell_N2id-90_Oct01||[[Blue:RNA-Seq Experiments:10012013|10012013]]||250pg UHRR||R06||RNaseIII||HL161||Lane (id90)||/home/kunzhang/seqStore/131009_HL161
|BL_huES8_SingleCell_N2id-90_Oct01||[[Blue:RNA-Seq Experiments:10012013|10012013]]||||250pg UHRR||R06||RNaseIII||HL161||Lane (id90)||/home/kunzhang/seqStore/131009_HL161
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|BL_huES8_SingleCell_N2id-89_Oct01||[[Blue:RNA-Seq Experiments:10012013|10012013]]||Single huESCs (30)||R06||RNaseIII||HL161||Lane (id89)||/home/kunzhang/seqStore/131009_HL161
|BL_huES8_SingleCell_N2id-89_Oct01||[[Blue:RNA-Seq Experiments:10012013|10012013]]||||Single huESCs (30)||R06||RNaseIII||HL161||Lane (id89)||/home/kunzhang/seqStore/131009_HL161
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|BL-LCM-10Cell_N2id1_4,7,8-Oct3||[[Blue:RNA-Seq Experiments:10032013|10032013]]||msLCM 10 cell||R06||RNaseIII||HL161||Lane (id1-4, 7, 8)||/home/kunzhang/seqStore/131009_HL161
|BL-LCM-10Cell_N2id1_4,7,8-Oct3||[[Blue:RNA-Seq Experiments:10032013|10032013]]||||msLCM 10 cell||R06||RNaseIII||HL161||Lane (id1-4, 7, 8)||/home/kunzhang/seqStore/131009_HL161
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== Additional Libraries Sequenced  ==
== Additional Libraries Sequenced  ==

Revision as of 22:35, 15 October 2013

Sequencing Summary Table

Library Experiment ID Sample TSO Condition Seq Run Lane Data Storage Location
BL-mCherryNPC-N2id81_92-Apr24 04242013 hNPC lo/hi Pool R04 RnaseIII HL152 Lanes 6-8 /home/kunzhang/seqStore/130521_HL152
BL-UHRR-IVT-May28 05282013 UHRR RL.IVT.N6/N9 RNaseIII HL155 Lanes 1,2 (id1,2,4,5) /home/kunzhang/seqStore/130627_HiSeq_RapidRun/BL-UHRR-IVT-May28
BL_mESC_SingleCell_0614 06142013 Single mESCs (60 cells) R04 (one and two step) RNaseIII, 94C 2min HL155 Lane 8 (id81-84) /home/kunzhang/seqStore/130628_HL155
BL_mCherryNPC_0620 06202013 human NPC sorts CD184+CD44- R04 RnaseIII HL155 Lanes1,2 (id1-5, 11-12) /home/kunzhang/seqStore/130628_HL155
BL_mESC_SingleCell_0621 06212013 mESCs (34 cells) R04 (one step) 94C 2min HL155 Lane 8 (id13-18) /home/kunzhang/seqStore/130628_HL155
BL_mNPC_SingleCell_N2id81_Jul25 07252013 Single mNPCs (60) R04 94C 2min HL157 Lane 3 (id81) /home/kunzhang/seqStore/130807_HL157
BL_mNPC_SingleCell_N2id82_Jul25 07252013 Single mNPCs (60) R04 94C 2min HL157 Lane 4 (id82) /home/kunzhang/seqStore/130807_HL157
BL_huES8_SingleCell_N2id85_0820 08202013 Single huESCs (30) R04 RNaseIII HL161 Lane (id85) /home/kunzhang/seqStore/131009_HL161
BL_huES8_SingleCell_N2id86_0820 08202013 Single huESCs (30) R04 RNaseIII HL161 Lane (id86) /home/kunzhang/seqStore/131009_HL161
BL_huES8_SingleCell_N2id87-88_0820 08202013 250pg UHRR R04 RNaseIII HL161 Lane (id87,88) /home/kunzhang/seqStore/131009_HL161
BL_UHRR_N2id9-12_0910 09102013 500pg UHRR R04-R05 RNaseIII, 94C 2min HL160 Lane 3 - 20% (id9-12) /home/kunzhang/seqStore/130925_HL160
BL_UHRR_N2id13-14_0910 09102013 500pg UHRR Smarter RNaseIII, 94C 2min HL161 Lane (id13, 14) /home/kunzhang/seqStore/131009_HL161
BL_UHRR_N2id9,12_Sept18 09182013 1ng UHRR STRT_V2_3,R03 RNaseIII HL161 Lane (id9, 12) /home/kunzhang/seqStore/131009_HL161
BL_UHRR/HuNu_N2id15-20_Sept27 09272013 1ng UHRR, HuNu, msLCM R06 RNAseIII (5-10min) HL161 Lane (id15-20) /home/kunzhang/seqStore/131009_HL161
BL_UHRR/HuNu_N2id21-28_Sept27 09272013 10pg-100pg UHRR R06 RNaseIII (5-10min) HL161 Lane (id21-28) /home/kunzhang/seqStore/131009_HL161
BL_huES8_SingleCell_N2id-90_Oct01 10012013 250pg UHRR R06 RNaseIII HL161 Lane (id90) /home/kunzhang/seqStore/131009_HL161
BL_huES8_SingleCell_N2id-89_Oct01 10012013 Single huESCs (30) R06 RNaseIII HL161 Lane (id89) /home/kunzhang/seqStore/131009_HL161
BL-LCM-10Cell_N2id1_4,7,8-Oct3 10032013 msLCM 10 cell R06 RNaseIII HL161 Lane (id1-4, 7, 8) /home/kunzhang/seqStore/131009_HL161

Additional Libraries Sequenced

12102012

02122013

02222013

03192013

04252013



Data Analysis

06202013