Daniel:Notebook/GenomeMiner/2013-9-26: Difference between revisions

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>Djacobse
(Created page with "=Mock HL155 (Started 9/9/2013)= Back to Calendar ==More BWA Align== Checking a few more bwa alignme...")
 
>Djacobse
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Checking a few more bwa alignments that might yield interesting results.  In this case I'm checking the 1 per read error data.
Checking a few more bwa alignments that might yield interesting results.  In this case I'm checking the 1 per read error data.


===Error Counting Results===
===Error Counting Results (1 Error per Read, Full Reference Sequence)===


  Error Rate: 1.35%
  Error Rate: 1.35%
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  Error Rate of Deletions: 0.041%
  Error Rate of Deletions: 0.041%
  Error Rate of Substitutions: 1.09%
  Error Rate of Substitutions: 1.09%
Alignment %: 99.77%

Revision as of 17:49, 26 September 2013

Mock HL155 (Started 9/9/2013)

Back to Calendar

More BWA Align

Checking a few more bwa alignments that might yield interesting results. In this case I'm checking the 1 per read error data.

Error Counting Results (1 Error per Read, Full Reference Sequence)

Error Rate: 1.35%
Error Rate of Insertions: 0.221%
Error Rate of Deletions: 0.041%
Error Rate of Substitutions: 1.09%
Alignment %: 99.77%