Andrew:Notebook/AR150702 C1: Difference between revisions

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(Created page with "==Sequential MDA on C1 with PEO1== * July 2, 2015 * Experiment ID: AR150702_C1 ===Results=== ====Gels==== 600px")
 
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====Gels====
====Gels====


[[File:AR150702_C1_gels.png|600px]]
[[File:AR150702_C1_gelsSlide1.png|600px]]
 
[[File:AR150702_C1_gelsSlide2.png|600px]]
 
[[File:AR150702_C1_gelsSlide3.png|600px]]
 
====Sequencing====
 
{| {{table}}
| align="center" style="background:#f0f0f0;"|'''Sample ID'''
| align="center" style="background:#f0f0f0;"|'''Index Sequence'''
| align="center" style="background:#f0f0f0;"|'''# of Reads'''
| align="center" style="background:#f0f0f0;"|'''Run Type, Minmum BP'''
| align="center" style="background:#f0f0f0;"|'''Library Size'''
| align="center" style="background:#f0f0f0;"|'''Read 1 Sequencing Primer'''
| align="center" style="background:#f0f0f0;"|'''Index Primer'''
| align="center" style="background:#f0f0f0;"|'''Read 2 Sequencing Primer'''
| align="center" style="background:#f0f0f0;"|'''Notes'''
|-
| INITIAL-PROJECT-SAMPLE-DATE-Index||CGTGCA||Million||SE/PE, 36+6+36||SIZE RANGE (BP)||Name||Name||Name||
|-
| AR-150702-D01-NxtXT-N702-S502||CGTACTAG-CTCTCTAT||1.5||SE50+8+8||200-800||HP10||HP12||NA||DT Tn5 Old
|-
| AR-150702-E01-NxtXT-N702-S503||CGTACTAG-TATCCTCT||1.5||SE50+8+8||200-800||HP10||HP12||NA||DT Tn5 Old
|-
| AR-150702-G01-NxtXT-N702-S505||CGTACTAG-GTAAGGAG||1.5||SE50+8+8||200-800||HP10||HP12||NA||DT Tn5 Old
|-
| AR-150702-D01-CoRE-NEBNext25||TACTGC||1.5||SE50+8+8||200-800||HP10||HP12||NA||DT Tn5 Old
|-
| AR-150702-E01-CoRE-NEBNext26||TCGTGA||1.5||SE50+8+8||200-800||HP10||HP12||NA||DT Tn5 Old
|-
| AR-150702-G01-CoRE-NEBNext27||TACGCG||1.5||SE50+8+8||200-800||HP10||HP12||NA||DT Tn5 Old
|-
| AR-150702-D01-Tn5059-N701-S506||TAAGGCGA-ACTGCATA||3||SE50+8+8||200-800||HP10||HP12||NA||DT Tn5 New
|-
| AR-150702-E01-Tn5059-N701-S507||TAAGGCGA-AAGGAGTA||3||SE50+8+8||200-800||HP10||HP12||NA||DT Tn5 New
|-
| AR-150702-G01-Tn5059-N701-S508||TAAGGCGA-CTAAGCCT||3||SE50+8+8||200-800||HP10||HP12||NA||DT Tn5 New
|-
|
|}

Revision as of 22:51, 9 July 2015

Sequential MDA on C1 with PEO1

  • July 2, 2015
  • Experiment ID: AR150702_C1

Results

Gels

File:AR150702 C1 gelsSlide1.png

File:AR150702 C1 gelsSlide2.png

File:AR150702 C1 gelsSlide3.png

Sequencing

Sample ID Index Sequence # of Reads Run Type, Minmum BP Library Size Read 1 Sequencing Primer Index Primer Read 2 Sequencing Primer Notes
INITIAL-PROJECT-SAMPLE-DATE-Index CGTGCA Million SE/PE, 36+6+36 SIZE RANGE (BP) Name Name Name
AR-150702-D01-NxtXT-N702-S502 CGTACTAG-CTCTCTAT 1.5 SE50+8+8 200-800 HP10 HP12 NA DT Tn5 Old
AR-150702-E01-NxtXT-N702-S503 CGTACTAG-TATCCTCT 1.5 SE50+8+8 200-800 HP10 HP12 NA DT Tn5 Old
AR-150702-G01-NxtXT-N702-S505 CGTACTAG-GTAAGGAG 1.5 SE50+8+8 200-800 HP10 HP12 NA DT Tn5 Old
AR-150702-D01-CoRE-NEBNext25 TACTGC 1.5 SE50+8+8 200-800 HP10 HP12 NA DT Tn5 Old
AR-150702-E01-CoRE-NEBNext26 TCGTGA 1.5 SE50+8+8 200-800 HP10 HP12 NA DT Tn5 Old
AR-150702-G01-CoRE-NEBNext27 TACGCG 1.5 SE50+8+8 200-800 HP10 HP12 NA DT Tn5 Old
AR-150702-D01-Tn5059-N701-S506 TAAGGCGA-ACTGCATA 3 SE50+8+8 200-800 HP10 HP12 NA DT Tn5 New
AR-150702-E01-Tn5059-N701-S507 TAAGGCGA-AAGGAGTA 3 SE50+8+8 200-800 HP10 HP12 NA DT Tn5 New
AR-150702-G01-Tn5059-N701-S508 TAAGGCGA-CTAAGCCT 3 SE50+8+8 200-800 HP10 HP12 NA DT Tn5 New