Daniel:Notebook/Haplotyping/LFR-HiC: Difference between revisions
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>Djacobse (Created page with "=Processing LFR and Hi-C Data= Back to Notebook This page describes the data processing for the LFR-HiC combined data in the haplotyping proj...") |
>Djacobse |
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#The data starts as the uncombined hair files | #The data starts as the uncombined hair files | ||
##[[Media:CombineHAIRS.sh|Merge script for combining]] | ##[[Media:CombineHAIRS.sh|Merge script for combining]] | ||
##[[Daniel:Notebook/Haplotyping/HiCData|Hi-C Data Processing]] and [[Daniel:Notebook/Haplotyping/ | ##[[Daniel:Notebook/Haplotyping/HiCData|Hi-C Data Processing]] and [[Daniel:Notebook/Haplotyping/LFRData|LFR Data Processing]] | ||
#Next, run hapcut in the log likelihood format | #Next, run hapcut in the log likelihood format | ||
##[[Media:Llhapcut.sh|Llhapcut.lfrhic.sh]] | ##[[Media:Llhapcut.sh|Llhapcut.lfrhic.sh]] |