Ns126:Calendar/NOTES/2016-1-5: Difference between revisions
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>Shicheng |
>Shicheng |
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*Fastq donwload address: [[File:Haib.download.files.txt]] | *Fastq donwload address: [[File:Haib.download.files.txt]] | ||
xargs -n 1 curl -O -L < haib.download.files.txt | xargs -n 1 curl -O -L < haib.download.files.txt | ||
===Fastq Quality Control=== | |||
trim_galore --phred64 --fastqc --illumina --non_directional --rrbs *.fastq | |||
===Fastq Alignment=== | ===Fastq Alignment=== | ||
===Methylation haploinfo=== | ===Methylation haploinfo=== |
Revision as of 08:27, 7 January 2016
Collection RRBS Dataset From Richard Myers, HAIB (Encode Project)
Data Description
Fastq Download
- Fastq donwload address: File:Haib.download.files.txt
xargs -n 1 curl -O -L < haib.download.files.txt
Fastq Quality Control
trim_galore --phred64 --fastqc --illumina --non_directional --rrbs *.fastq