Daniel:Notebook/ComboLock: Difference between revisions

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This page describes experiments done for the Combo-lock project. The overview of the project is to encapsulate cells (or nuclei) in droplets using a Drop Seq type device. The device will include bis/acrylamide gel formation, and formaldehyde to bond the nucleotides/protein to e gel matrix. following that, attachment of barcoded RNA/antibodyprobes will occur. The antibodies will contain nucleotide barcodes. The nucleotide barcodes will be read by universl pdlock probes, which will then be ligated/cicularized. following ligation, RCA will be performed, and the RCA product isolated for sequencing.
This page describes experiments done for the Combo-lock project. The overview of the project is to encapsulate cells (or nuclei) in droplets using a Drop Seq type device. The device will include bis/acrylamide gel formation, and formaldehyde to bond the nucleotides/protein to e gel matrix. following that, attachment of barcoded RNA/antibodyprobes will occur. The antibodies will contain nucleotide barcodes. The nucleotide barcodes will be read by universl pdlock probes, which will then be ligated/cicularized. following ligation, RCA will be performed, and the RCA product isolated for sequencing.


[[Daniel:Notebook/ComboLock/Polyacrylamide|PA Gel Formulas]]
==Calendar==


<calendar>
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Revision as of 23:29, 11 March 2016

Combo-Lock

Back to Main

This page describes experiments done for the Combo-lock project. The overview of the project is to encapsulate cells (or nuclei) in droplets using a Drop Seq type device. The device will include bis/acrylamide gel formation, and formaldehyde to bond the nucleotides/protein to e gel matrix. following that, attachment of barcoded RNA/antibodyprobes will occur. The antibodies will contain nucleotide barcodes. The nucleotide barcodes will be read by universl pdlock probes, which will then be ligated/cicularized. following ligation, RCA will be performed, and the RCA product isolated for sequencing.

PA Gel Formulas

Calendar

<calendar> name=Daniel:Notebook/ComboLock format=%name/%year-%month-%day date=2016/02/01 view=oneyear </calendar>