Alice:LabNotes/2007-12-5: Difference between revisions

From ZhangLabWiki
Jump to navigation Jump to search
>Zsakura2
No edit summary
>Zsakura2
No edit summary
Line 35: Line 35:
The two samples we are really interested in are sample #6 and #7. The sample is GM20431 cDNA with rs 1264899 forward and reverse primer. The SNP location is rs 1264899. Then we will use software PeakPicker to compare and quantize the peaks.<br>
The two samples we are really interested in are sample #6 and #7. The sample is GM20431 cDNA with rs 1264899 forward and reverse primer. The SNP location is rs 1264899. Then we will use software PeakPicker to compare and quantize the peaks.<br>
Here is the files of the original sequencing result files:<br>
Here is the files of the original sequencing result files:<br>
* [https://genome-tech.ucsd.edu/LabNotes/sequencing result 12-5-07.rar sequencing results]

Revision as of 05:54, 1 January 2008

The sequencing results finally worked!

Sample SNP Sequencing result
1 rs3753565 yes
2 rs2295680 yes
3 rs6103 no
4 rs1264899 yes
5 rs1264899 yes
6 rs1264899 yes
7 rs1264899 yes

Sample 1
File:SNP 1.png
Sample 2
File:SNP 2.png
Sample 4
File:SNP 4.png
Sample 5
File:SNP 5.png
Sample 6
File:SNP 6.png
Sample 7
File:SNP 7.png
The two samples we are really interested in are sample #6 and #7. The sample is GM20431 cDNA with rs 1264899 forward and reverse primer. The SNP location is rs 1264899. Then we will use software PeakPicker to compare and quantize the peaks.
Here is the files of the original sequencing result files: