Alice:LabNotes/2007-12-5: Difference between revisions
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The two samples we are really interested in are sample #6 and #7. The sample is GM20431 cDNA with rs 1264899 forward and reverse primer. The SNP location is rs 1264899. Then we will use software PeakPicker to compare and quantize the peaks.<br> | The two samples we are really interested in are sample #6 and #7. The sample is GM20431 cDNA with rs 1264899 forward and reverse primer. The SNP location is rs 1264899. Then we will use software PeakPicker to compare and quantize the peaks.<br> | ||
Here is the files of the original sequencing result files:<br> | Here is the files of the original sequencing result files:<br> | ||
* [https://genome-tech.ucsd.edu/LabNotes/ | * [https://genome-tech.ucsd.edu/LabNotes/index.php/Image:Sequencing_results.zip Sequencing results] |
Revision as of 05:58, 1 January 2008
The sequencing results finally worked!
Sample | SNP | Sequencing result | |
1 | rs3753565 | yes | |
2 | rs2295680 | yes | |
3 | rs6103 | no | |
4 | rs1264899 | yes | |
5 | rs1264899 | yes | |
6 | rs1264899 | yes | |
7 | rs1264899 | yes | |
Sample 1
File:SNP 1.png
Sample 2
File:SNP 2.png
Sample 4
File:SNP 4.png
Sample 5
File:SNP 5.png
Sample 6
File:SNP 6.png
Sample 7
File:SNP 7.png
The two samples we are really interested in are sample #6 and #7. The sample is GM20431 cDNA with rs 1264899 forward and reverse primer. The SNP location is rs 1264899. Then we will use software PeakPicker to compare and quantize the peaks.
Here is the files of the original sequencing result files: