AlanFung:Protocol/Genome Analyzer

From ZhangLabWiki
Revision as of 13:30, 21 July 2009 by >Alan6017518 (→‎GA Setting)
Jump to navigation Jump to search

Genome Analyzer User Guide

SCS v2.4

  • start up scsv2.4

setting the run parameters

  • click <view>
  • clear box next to show on start up
  • from the data collection screen
  • edit|run parameters|GA Settings / RunBrowser Settings

GA Setting

  • specify the network location for run results
  • set perferences for real time analysis results
  • set settings for auto calibration
*delete images (select this option to delete images from the genome analyzer computer after analysis

Validation strings

  • edit if you are using a customized identification system

Use auto calibration

  • select this option to enable the auto calibration feature
  • refer to page 29 for a description of the auto calibration feature
  • note: if this option is cleared, focus calibration must be performed manually as described in appendix B

Run Browser Settings

  • runbrowzer reports, specify which runbrowser reports you want to show and export
if selected the first cycle is generated by the software
  • enable runbrowser report emails to sens reports to the email addresses specified

Cluster Station