Daniel:Notebook/GenomeMiner

From ZhangLabWiki
Revision as of 00:00, 14 August 2013 by >Djacobse
Jump to navigation Jump to search

Back to Main

Link to useful Perl website: Basic Perl

<calendar> name=Daniel:Notebook/GenomeMiner format=%name/%year-%month-%day date=2013/02/01 view=oneyear </calendar>

Useful Linux Commands

SCP to laptop

%% scp <remote user>@<remote machine>:<remote path> <local file>
scp djacobse@132.239.135.41:/home/djacobse/HL155/130628_HL155/probecount.csv probecount.csv

HL155

Analysis of 3 probe production companies: MYcroarray, Agilent, and Custom Array.

Comparing errors per 100 bp

  Insertions/Deletions (/100 bp) Substitutions (/100 bp)
Mycroarray 1.20 0.74
Agilent 0.08 0.48
Custom Array 12K 0.05 0.60