2010
Jan-Jun
Date
|
Run
|
Lane
|
Tube Label
|
Seq facility
|
Read length
|
# filtered reads (bps)
|
100415 |
HL050 |
S1 |
AL-Exome-ips 11a-Eggan-Mar9 |
Zhang Lab |
80 |
|
100415 |
HL050 |
S2 |
AL-Exome-CV2- Apr12-Nimblegen |
Zhang Lab |
80 |
|
100415 |
HL050 |
S3 |
AL-Exome-CV2- Apr12-Nimblegen |
Zhang Lab |
80 |
|
100415 |
HL050 |
S4 |
AL-Exome-ips 11a-Eggan-Mar9 |
Zhang Lab |
80 |
|
100415 |
HL050 |
S5 |
AL-Exome-CV3-Apr12-Nimblegen |
Zhang Lab |
80 |
|
100415 |
HL050 |
S6 |
AL-Exome-CV3-Apr12-Nimblegen |
Zhang Lab |
80 |
|
100415 |
HL050 |
S7 |
Al-Exome-CV4-Apr12-Nimblegen |
Zhang Lab |
80 |
|
100415 |
HL050 |
S8 |
Al-Exome-CV4-Apr12-Nimblegen |
Zhang Lab |
80 |
|
100411 |
HL049_2 |
S1 |
AL-exome-ips 11b-Eggan-Mar9 |
Zhang Lab |
80 |
107,023,000
|
100411 |
HL049_2 |
S2 |
AL-Exome-PGP1F-Mar9-Agilent_Cell_Pellete |
Zhang Lab |
80 |
196,788,000
|
100411 |
HL049_2 |
S3 |
AL-Exome-PGP1F-Mar9-Agilent_Cell_Pellete |
Zhang Lab |
80 |
171,324,000
|
100411 |
HL049_2 |
S4 |
AL-exome-hFib 17-Eggan-Mar9 |
Zhang Lab |
80 |
220,909,000
|
100411 |
HL049_2 |
S5 |
AL-Exome-ips 11a-Eggan-Mar9 |
Zhang Lab |
80 |
165,412,000
|
100411 |
HL049_2 |
S6 |
AL-Exome-ips 11a-Eggan-Mar9 |
Zhang Lab |
80 |
18,023,000
|
100411 |
HL049_2 |
S7 |
AL-Exome-ips 29e-Eggan-Mar9 |
Zhang Lab |
80 |
120,079,000
|
100411 |
HL049_2 |
S8 |
AL-Exome-ips 29e-Eggan-Mar9 |
Zhang Lab |
80 |
121,930,000
|
100407 |
DD001 |
S1 |
HMS-GC-Exome-PGP3 |
Zhang Lab |
60 |
87,940,000
|
100407 |
DD001 |
S2 |
MCG-HS-EJ645-Feb26 |
Zhang Lab |
60 |
171,482,000
|
100407 |
DD001 |
S3 |
MCG-HS-EJ656-Feb26 |
Zhang Lab |
60 |
44,659,000
|
100407 |
DD001 |
S4 |
HMS-GC-Exome-PGP10 |
Zhang Lab |
60 |
199,837,000
|
100407 |
DD001 |
S5 |
DD-BSPP-CpG97K-05215A18-Mar18-B9 |
Zhang Lab |
60 |
132,912,000
|
100407 |
DD001 |
S6 |
DD-BSPP-CpG97K-05215B09-Mar18-B10 |
Zhang Lab |
60 |
36,039,000
|
100407 |
DD001 |
S7 |
DD-BSPP-CpG97K-09351B09-Mar18-B22 |
Zhang Lab |
60 |
118,975,000
|
100407 |
DD001 |
S8 |
DD-BSPP-CpG97K-13066B09-Mar18-B28 |
Zhang Lab |
60 |
31,822,000
|
100401 |
HL048 |
S1 |
AL-Exome-PGP1_iPS_P16-Mar23-Nimblegen |
Zhang Lab |
80 |
226,568,000
|
100401 |
HL048 |
S2 |
AL-Exome-PGP1_iPS_P16-Mar23-Nimblegen |
Zhang Lab |
80 |
252,553,000
|
100401 |
HL048 |
S3 |
AL-Exome-PGP1F-Mar23-Nimblegen |
Zhang Lab |
80 |
195,016,000
|
100401 |
HL048 |
S4 |
AL-Exome-PGP1F-Mar23-Nimblegen |
Zhang Lab |
80 |
189,243,000
|
100401 |
HL048 |
S5 |
AL-Exome-hFib29-Eggan-Mar9 |
Zhang Lab |
80 |
244,474,000
|
100401 |
HL048 |
S6 |
AL-Exome-hFib29-Eggan-Mar9 |
Zhang Lab |
80 |
218,762,000
|
100401 |
HL048 |
S7 |
AL-Exome-29A_Eggan-Mar17 |
Zhang Lab |
80 |
222,105,000
|
100401 |
HL048 |
S8 |
AL-Exome-29A_Eggan-Mar17 |
Zhang Lab |
80 |
206,253,000
|
100326 |
HL047 |
S1 |
AL-Exome-CViB-Mar23-Nimblegen |
Zhang Lab |
80 |
215,018,000
|
100326 |
HL047 |
S2 |
AL-Exome-CViB-Mar23-Nimblegen |
Zhang Lab |
80 |
213,295,000
|
100326 |
HL047 |
S3 |
HMS-GC-Exome-PGP9-Feb24 |
Zhang Lab |
80 |
239,392,000
|
100326 |
HL047 |
S4 |
HMS-GC-Exome-PGP2 |
Zhang Lab |
80 |
273,729,000
|
100326 |
HL047 |
S5 |
HMS-GC-Exome-PGP3 |
Zhang Lab |
80 |
74,671,000
|
100326 |
HL047 |
S6 |
HMS-GC-Exome-PGP3 |
Zhang Lab |
80 |
75,285,000
|
100326 |
HL047 |
S7 |
AL-Exome-CVF-Mar23-Nimblegen |
Zhang Lab |
80 |
246,727,000
|
100326 |
HL047 |
S8 |
AL-Exome-CVF-Mar23-Nimblegen |
Zhang Lab |
80 |
238,601,000
|
100318 |
HL046_3 |
S1 |
AL-exome-hFib 17-Eggan-Mar9 |
Zhang Lab |
80 |
135,046,000
|
100318 |
HL046_3 |
S2 |
AL-exome-hFib 11-Eggan-Mar9 |
Zhang Lab |
80 |
29,805,000
|
100318 |
HL046_3 |
S3 |
AL-exome-ips 11b-Eggan-Mar9 |
Zhang Lab |
80 |
86,954,000
|
100318 |
HL046_3 |
S4 |
AL-exome-ips 17a-Eggan-Mar9 |
Zhang Lab |
80 |
2,353,000
|
100318 |
HL046_3 |
S5 |
AL-exome-ips 17b-Eggan-Mar9 |
Zhang Lab |
80 |
183,426,000
|
100318 |
HL046_3 |
S6 |
AL-Exome-CViB-Feb21-Agilent |
Zhang Lab |
80 |
75,139,000
|
100318 |
HL046_3 |
S7 |
AL-Exome-CViB-Feb21-Agilent |
Zhang Lab |
80 |
67,800,000
|
100318 |
HL046_3 |
S8 |
MCG-HS-EJ657-Feb26 |
Zhang Lab |
80 |
209,397,000
|
100312 |
HL045 |
S1 |
AL-exome-hFib 17-Eggan-Mar9 |
Zhang Lab |
80 |
156,964,000
|
100312 |
HL045 |
S2 |
HMS-GC-Exome-PGP2 |
Zhang Lab |
80 |
234,704,000
|
100312 |
HL045 |
S3 |
HMS-GC-Exome-PGP7-Feb24 |
Zhang Lab |
80 |
233,180,000
|
100312 |
HL045 |
S4 |
HMS-GC-Exome-PGP9-Feb24 |
Zhang Lab |
80 |
229,420,000
|
100312 |
HL045 |
S5 |
AL-exome-hFib 11-Eggan-Mar9 |
Zhang Lab |
80 |
155,689,000
|
100312 |
HL045 |
S6 |
AL-exome-ips 11b-Eggan-Mar9 |
Zhang Lab |
80 |
158,096,000
|
100312 |
HL045 |
S7 |
AL-exome-ips 17a-Eggan-Mar9 |
Zhang Lab |
80 |
197,722,000
|
100312 |
HL045 |
S8 |
AL-exome-ips 17b-Eggan-Mar9 |
Zhang Lab |
80 |
154,612,000
|
100309 |
HL044 |
S1 |
JD-CPG97K-BC_11306A18-Feb25-B25 |
Zhang Lab |
60 |
166,072,000
|
100309 |
HL044 |
S2 |
JD-CPG97K-BC_11306B09-Feb25-B26 |
Zhang Lab |
60 |
140,360,000
|
100309 |
HL044 |
S3 |
JD-CPG97K-BC_13066A17-Feb25-B27 |
Zhang Lab |
60 |
178,182,000
|
100309 |
HL044 |
S4 |
AL-Genome-FS_gDNA-Feb8 |
Zhang Lab |
60 |
113,479,000
|
100309 |
HL044 |
S5 |
JD-CPG97K+30K-BC_01373A17-Jan15-B3 |
Zhang Lab |
60 |
79,558,000
|
100309 |
HL044 |
S6 |
AL-Exome-CViB-Feb21-Agilent |
Zhang Lab |
60 |
180,854,000
|
100309 |
HL044 |
S7 |
AL-DigiQ-CVF_PhiX-Mar3-(Jan29) |
Zhang Lab |
60 |
156,095,000
|
100309 |
HL044 |
S8 |
KZ-DigiQ-FS_6N_PhiX-Mar3-(Jan27) |
Zhang Lab |
60 |
73,584,000
|
100305 |
HL043 |
S1 |
AL-Genome-FS_gDNA-Feb8 |
Zhang Lab |
60 |
118,995,000
|
100305 |
HL043 |
S2 |
AL-Genome-FS_gDNA-Feb8 |
Zhang Lab |
60 |
124,127,000
|
100305 |
HL043 |
S3 |
AL-DigiQ-CVF_Feb-Mar3 w/ PhiX |
Zhang Lab |
60 |
170,327,000
|
100305 |
HL043 |
S4 |
JD-CPG97K-BC_09351A17-Feb25 -B21 |
Zhang Lab |
60 |
148,692,000
|
100305 |
HL043 |
S5 |
JD-CPG97K-BC_09491A17-Feb25-B23 |
Zhang Lab |
60 |
151,292,000
|
100305 |
HL043 |
S6 |
JD-CPG97K-BC_09491B09-Feb25-B24 |
Zhang Lab |
60 |
149,023,000
|
100305 |
HL043 |
S7 |
AL-Genome-DF_gDNA-Feb8 |
Zhang Lab |
60 |
227,308,000
|
100305 |
HL043 |
S8 |
AL-Genome-DF_gDNA-Feb8 |
Zhang Lab |
60 |
216,444,000
|
|
|
|
AL-DigiQ-CViB/iF-Jan29 |
|
|
|
100302 |
HL042 |
S1 |
KZ-DigiQ-FS_300BP-Jan27 |
Zhang Lab |
60 |
110,284,000
|
|
|
|
PhiX |
|
|
|
100302 |
HL042 |
S2 |
MCG-HS-EJ644-Feb26 |
Zhang Lab |
60 |
80,208,000
|
100302 |
HL042 |
S3 |
AL-Exome-CViB-Feb21-Agilent |
Zhang Lab |
60 |
168,307,000
|
100302 |
HL042 |
S4 |
JD-cpg97k-Breastcancer_09092B09-Feb25-B16 |
Zhang Lab |
60 |
111,363,000
|
100302 |
HL042 |
S5 |
JD-cpg97k-Breastcancer_09123A17-Feb25-B17 |
Zhang Lab |
60 |
155,409,000
|
100302 |
HL042 |
S6 |
JD-cpg97k-Breastcancer_09123B09-Feb25-B18 |
Zhang Lab |
60 |
181,370,000
|
100302 |
HL042 |
S7 |
JD-cpg97k-Breastcancer_09206B09-Feb25-B19 |
Zhang Lab |
60 |
158,302,000
|
100302 |
HL042 |
S8 |
JD-cpg97k-Breastcancer_09265B09-Feb25-B20 |
Zhang Lab |
60 |
167,272,000
|
100226 |
HL041 |
S1 |
JD-CPG97K-BreastCancer-05359A17_R-Feb17-B11R |
Zhang Lab |
60 |
209,228,000
|
|
|
|
AL-DigiQ-CViB/iF-Jan29 |
|
|
|
100226 |
HL041 |
S2 |
KZ-DigiQ-FS_300BP-Jan27 |
Zhang Lab |
60 |
56,022,000
|
|
|
|
PhiX |
|
|
|
100226 |
HL041 |
S3 |
HMS-GC-Exome-PGP7-Feb24 |
Zhang Lab |
60 |
228,632,000
|
100226 |
HL041 |
S4 |
HMS-GC-Exome-PGP9-Feb24 |
Zhang Lab |
60 |
199,890,000
|
100226 |
HL041 |
S5 |
JD-CPG97K-BreastCancer-05359B09_R-Feb17-B12R |
Zhang Lab |
60 |
201,809,000
|
100226 |
HL041 |
S6 |
JD-CPG97K-BreastCancer_07292A17_R-Feb17-B13R |
Zhang Lab |
60 |
233,082,000
|
100226 |
HL041 |
S7 |
JD-CPG97K-BreastCancer_07292B09_R-Feb17-B14R |
Zhang Lab |
60 |
212,139,000
|
|
|
|
AL-DigiQ-CVF-Jan29 |
|
|
|
100226 |
HL041 |
S8 |
KZ-DigiQ-FS_6N-Jan27 |
Zhang Lab |
60 |
218,853,000
|
|
|
|
PhiX |
|
|
|
100219 |
HL040 |
S1 |
UCSD-BO-YC_RNA-Feb17 |
Zhang Lab |
60 |
188,475,000
|
|
|
|
AL-DigiQ-CViB/iF-Jan29 |
|
|
|
100219 |
HL040 |
S2 |
KZ-DigiQ-FS_300BP-Jan27 |
Zhang Lab |
60 |
149,994,000
|
|
|
|
PhiX |
|
|
|
100219 |
HL040 |
S3 |
JD-CPG97k+30k-Breast_cancer_01373A17-Jan15-B3 |
Zhang Lab |
60 |
25,607,000
|
100219 |
HL040 |
S4 |
JD-CPG97k+30k-Breast_cancer_01373B09-Jan15-B4 |
Zhang Lab |
60 |
127,220,000
|
100219 |
HL040 |
S5 |
JD-CPG97K-BreastCancer-09075B09-Feb17-15E |
Zhang Lab |
60 |
119,069,000
|
100219 |
HL040 |
S6 |
JD-CPG97K-BreastCancer-09075B09-Feb17-15R |
Zhang Lab |
60 |
146,519,000
|
100219 |
HL040 |
S7 |
AL-DigiQ-CVF-Feb17 w/ PhiX |
Zhang Lab |
60 |
140,382,000
|
|
|
|
AL-DigiQ-CVF-Jan29 |
|
|
|
100219 |
HL040 |
S8 |
KZ-DigiQ-FS_6N-Jan27 |
Zhang Lab |
60 |
140,382,000
|
|
|
|
PhiX |
|
|
|
100212 |
HL039 |
S1 |
JD-CPGmm9A-CtmESC-Feb10 |
Zhang Lab |
60 |
104,087,000
|
|
|
|
AL-DigiQ-CViB/iF-Jan29 |
|
|
|
100212 |
HL039 |
S2 |
KZ-DigiQ-FS_300BP-Jan27 |
Zhang Lab |
60 |
0
|
|
|
|
PhiX |
|
|
|
100212 |
HL039 |
S3 |
HMS-GC-exome-Nim-GT |
Zhang Lab |
60 |
154,000
|
100212 |
HL039 |
S4 |
HMS-GC-Exome-PGP4 |
Zhang Lab |
60 |
101,994,000
|
100212 |
HL039 |
S5 |
JD-CPG97K-Breastcancer_03170B09-Jan28-B7 |
Zhang Lab |
60 |
172,048,000
|
100212 |
HL039 |
S6 |
JD-CPG97K-Breast_Cancer_03259B09-Jan28-B8 |
Zhang Lab |
60 |
153,256,000
|
100212 |
HL039 |
S7 |
AL-Exome-CViB-AB_Jan28 |
Zhang Lab |
60 |
0
|
100212 |
HL039 |
S8 |
JD-CPGmm9A-TETmESC-Feb10 |
Zhang Lab |
60 |
187,347,000
|
|
| Feb 7||HL038||Exome||s1,AL-Exome-CViB-AB-Jan28|| -||Zhang Lab||Alice||60bp||2,631,195
|-
| Feb 7||HL038||BSPP||s2,JD-cpg97k-Breastcancer_sample_01373B09-Jan28|| -||Zhang Lab||Jie||60bp||28,592,257||73%
|-
| Feb 7||HL038||BSPP||s3,JD-cpg97k-Breastcancer_sample_01436B09_Jan28|| -||Zhang Lab||Jie||60bp||28,611,301||72%
|-
| Feb 7||HL038||Exome||s4,KZ-Exome-CViB-N2-Jan28|| -||Zhang Lab||Kun||60bp||22,996,517
|-
| Feb 7||HL038||BSPP||s5,JD-cpg97k-Harvard_sample_M0013.1-Jan28|| -||Zhang Lab||Jie||60bp||27,703,912
|-
| Feb 7||HL038||BSPP||s6,JD-cpg97k-Harvard_sample_M0077.3-Jan28|| -||Zhang Lab||Jie||60bp||28,515,530
|-
| Feb 7||HL038||BSPP||s7,JD-cpg97k-Harvard_sample_M0124.3-Jan28||-||Zhang Lab||Jie||60bp||27,796,744
|-
| Feb 7||HL038||BSPP||s8,JD-cpg97k-Harvard_sample_M0188.3-Jan28|| -||Zhang Lab||Jie||60bp||26,285,658
|-
| Feb 2||HL037||BSPP||s1,JD-B3|| -||Zhang Lab||Alice||60bp||329192
|-
| Feb 2||HL037||DigiQ||s2,AL-DigiQ-CVF-Jan29/KZ-DigiQ-FS_6N-Jan27|| -||Zhang Lab||Jie||60bp||396995
|-
| Feb 2||HL037||Exome||s3,AL-Exome-DF-Jan26-Nimblegen|| -||Zhang Lab||Alice||60bp||24111229||86%
|-
| Feb 2||HL037||BSPP||s4,KZ-BSPP-B2-N2-Jan28|| -||Zhang Lab||Kun||60bp||24816617||22%/60%(hg18)
|-
| Feb 2||HL037||Exome||s5,AL-Exome-CViB-AB-Jan28|| -||Zhang Lab||Alice||60bp||2627559||86%
|-
| Feb 2||HL037||Exome||s6,AL-Exome-CViB-CDE-Jan28|| -||Zhang Lab||Alice||60bp||26225044||78%
|-
| Feb 2||HL037||DigiQ||s7, AL-DigiQ-CViB-iF-Jan29/KZ-DigiQ-FS_300P-Jan27||-||Zhang Lab||Alice||60bp||461181
|-
| Feb 2||HL037||Exome||s8,AL-Exome-FS-Jan26-Nimblegen|| -||Zhang Lab||Alice||60bp||20920646||90%
|-
| Jan 27||HL036||Exome||s1,AL-Exome-DF-Jan26-Nimblegen|| -||Zhang Lab||Alice||60bp||29,983,562||86.81%
|-
| Jan 27||HL036||DigiQ||s2,AL-DigiQ-CViB/iF-Jan26|| -||Zhang Lab||Alice||60bp||884920
|-
| Jan 27||HL036||BSPP||s3,JD-CPG97K-Harvard_Sample_B0134.1-Jan22|| -||Zhang Lab||Jie||60bp||17,618,873||26%/68%(hg18)
|-
| Jan 27||HL036||Exome||s4,AL-Exome-FS-Jan26-Nimblegen|| -||Zhang Lab||Alice||60bp||30,430,624||89.97%
|-
| Jan 27||HL036||BSPP||s5,JD-CPG97K-Harvard_Sample_B0107.1-Jan22|| -||Zhang Lab||Jie||60bp||13,332,549||34%/70%(hg18)
|-
| Jan 27||HL036||BSPP||s6,JD-CPG97K-Harvard_Sample_B0108.1-Jan22|| -||Zhang Lab||Jie||60bp||15,408,196||36%/72%(hg18)
|-
| Jan 27||HL036||DigiQ||s7, AL-DigiQ-CVF-Jan26||-||Zhang Lab||Alice||60bp||failed
|-
| Jan 27||HL036||BSPP||s8,JD-CPG97k+30k-Breast_Cancer_01192B09-Jan15|| -||Zhang Lab||Jie||60bp||17,643,295||14.5%/62%(hg18)
|-
| Jan 23||HL035||Exome||s2,HMS-GC-Exome-PGP2|| -||Zhang Lab||Alice||60bp||28,245,781
|-
| Jan 23||HL035||Exome||s3,HMS-GC-Exome-PGP3|| -||Zhang Lab||Alice||60bp||27,995,793
|-
| Jan 23||HL035||Exome||s4,HMS-GC-Exome-PGP3|| -||Zhang Lab||Alice||60bp||23,101,612
|-
| Jan 23||HL035||BSPP||s5,JD-CPG97K-HarvardB0047.1-Jan22|| -||Zhang Lab||Jie||60bp||10,279,091||17%
|-
| Jan 23||HL035||BSPP||s6,JD-CPG97K+30K-HarvardB0060.1-Jan22|| -||Zhang Lab||Jie||60bp||12,433,511||31%
|-
| Jan 23||HL035||BSPP||s7,JD-CPG97K-HarvardB0070.1-Jan22||-||Zhang Lab||Jie||60bp||14,238,777||36%
|-
| Jan 23||HL035||Exome||s8,AL-Exome-PGP7-Jan18|| -||Zhang Lab||Alice||60bp||7,225,106
|-
| Jan 13||HL034||Exome||s1,HMS-GC-Exome-PGP5-Oct09|| -||Zhang Lab||Billy/Luhan||60bp||15,630,851
|-
| Jan 13||HL034||DigiQ||s2,HMS-GC-Exome-PGP5-Oct09|| -||Zhang Lab||Billy/Luhan||60bp||16,208,687
|-
| Jan 13||HL034||Exome||s3,AL-Exome-CViB-Jan14-AB|| -||Zhang Lab||Alice||60bp||15,754,533
|-
| Jan 13||HL034||Ctrl||s4,AL-Exome-CViB-Jan14-AB|| -||Zhang Lab||Alice||60bp||15,864,921
|-
| Jan 13||HL034||Exome||s5,AL-Exome-CViB-Jan14-CDE|| -||Zhang Lab||Alice||60bp||15,761,086
|-
| Jan 13||HL034||Exome||s6,AL-Exome-CViB-Jan14-CDE|| -||Zhang Lab||Alice||60bp||15,795,450
|-
| Jan 13||HL034||BSPP||s7,JD-cpg97k+30k-BC-01230B09-Jan15||-||Zhang Lab||Jie||60bp||12,246,857||26%
|-
| Jan 13||HL034||Exome||s8,HMS-GC-exome-Nim-GT|| -||Zhang Lab||Billy/Luhan||60bp||7,671,888
|-
| Jan 13||HL033||Exome||s1,HMS-GC-exome-Nim-GT|| -||Zhang Lab||Billy/Luhan||60bp||9,619,807
|-
| Jan 13||HL033||DigiQ||s2,KZ-DigiQ-DF-Jan11/AL-DigiQ-CVF-Jan12|| -||Zhang Lab||Alice/Kun||60bp||5,020,038
|-
| Jan 13||HL033||BisExSeq||s3,HL-BisExon-NA20431|| -||Zhang Lab||Alan||60bp||11,363,087||75%
|-
| Jan 13||HL033||Ctrl||s4,PhiX|| -||Zhang Lab||Illumina||60bp||4,589,847
|-
| Jan 13||HL033||Exome||s5,AL-Exome-CViB-Jan12-AB|| -||Zhang Lab||Alice||60bp||1,647,688(overloaded)
|-
| Jan 13||HL033||Exome||s6,AL-Exome-CViB-Jan12-CDE|| -||Zhang Lab||Alice||60bp||13,489(overloaded)
|-
| Jan 13||HL033||DigiQ||s7, KZ-DigiQ-FS-Jan11/AL-DigiQ-CViB-Jan12|| -||Zhang Lab||Alice/Kun||60bp||5,903,015
|-
| Jan 13||HL033||Exome||s8, AL-Exome-CViB-Jan12-AB|| -||Zhang Lab||Kun||60bp||978,032(overloaded)
|-
| Jan 05||HL032||DigiQ||s1,AL-DigiQ-CVF-Dec23|| -||Zhang Lab||Alice||60bp||14,950,591
|-
| Jan 05||HL032||DigiQ||s2,AL-DigiQ-CViB-Dec23|| -||Zhang Lab||Alice||60bp||14,520,807
|-
| Jan 05||HL032||DigiQ||s3,KZ-DigiQ-DF-Jan04|| -||Zhang Lab||Kun||60bp||10,753,395
|-
| Jan 05||HL032||Ctrl||s4,PhiX|| -||Zhang Lab||Illumina||60bp||25,057(bad DNA)
|-
| Jan 05||HL032||RRS||s5,KZ-RRS-CVF1-Nov27|| -||Zhang Lab||Kun||60bp||8,295,917
|-
| Jan 05||HL032||RRS||s6,KZ-RRS-CViF1-Nov27|| -||Zhang Lab||Kun||60bp||8,810,014
|-
| Jan 05||HL032||DigiQ||s7, KZ-DigiQ-FS-Jan04|| -||Zhang Lab||Kun||60bp||10,177,605
|-
| Jan 05||HL032||Exome||s8,HMS-GC-PGP8A-Nov1|| -||Zhang Lab||Billy/Luhan||60bp||13,216,056
|}
2009
Jul-Dec
Month
|
Date
|
Probe Set
|
Tube label
|
Conc. x vol.
|
Seq facility
|
Lib. Const.
|
Read length
|
# filtered reads
|
# mappable reads
|
Dec 29 |
HL030 |
Exome |
s1,PGP9 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
14,705,217
|
Dec 29 |
HL030 |
Exome |
s2,PGP9 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
14,950,591
|
Dec 29 |
HL030 |
Exome |
s3,PGP9 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
14,832,179
|
Dec 29 |
HL030 |
Exome |
s4,NA12878 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
15,414,631
|
Dec 29 |
HL030 |
Exome |
s5,NA12878 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
15,536,069
|
Dec 29 |
HL030 |
Exome |
s6,NA12878 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
15,767,169
|
Dec 29 |
HL030 |
Hap |
s7, HC-MDA-hCell-Dec17-sam006 |
- |
Zhang Lab |
Sam(12/17/09) |
60bp |
15,094,541
|
Dec 29 |
HL030 |
? |
s8,TM |
- |
Zhang Lab |
Palsson |
60bp |
2,384(Failed)
|
Dec 26 |
AL008 |
Hap |
s1, HC-MDA-hCell-Dec17-sam003 |
- |
Zhang Lab |
Sam(12/17/09) |
60bp |
15,826,724
|
Dec 26 |
AL008 |
Hap |
s2, HC-MDA-hCell-Dec17-sam004 |
- |
Zhang Lab |
Sam(12/17/09) |
60bp |
7,814,019
|
Dec 26 |
AL008 |
Hap |
s3, HC-MDA-hCell-Dec17-sam005 |
- |
Zhang Lab |
Sam(12/17/09) |
60bp |
4,516,674
|
Dec 26 |
AL008 |
DigiQuant |
s4,PCR-CV-iB(w/PhiX) |
- |
Zhang Lab |
Alice |
60bp |
5,625,091
|
Dec 26 |
AL008 |
BSPP |
s5,B2-175bp |
- |
Zhang Lab |
Ida |
60bp |
2,629,431 |
22%
|
Dec 26 |
AL008 |
BSPP |
s6,B2-200bp |
- |
Zhang Lab |
Ida |
60bp |
3,834,872 |
21%
|
Dec 26 |
AL008 |
BSPP |
s7,H2-175bp |
- |
Zhang Lab |
Ida |
60bp |
8,081,341 |
26%
|
Dec 26 |
AL008 |
BSPP |
s8,H2-200bp |
- |
Zhang Lab |
Ida |
60bp |
10,992,765 |
30%
|
Dec 22 |
AL007 |
DigiQuant |
s2,PCR-CV-hiPS-F |
- |
Zhang Lab |
Alice |
60bp |
0(overloaded)
|
Dec 22 |
AL007 |
Exome |
s3,CV-iB-ACE |
- |
Zhang Lab |
Kun |
60bp |
1,235,398
|
Dec 22 |
AL007 |
Exome |
s4,CV-iB-BD |
- |
Zhang Lab |
Kun |
60bp |
642,138
|
Dec 22 |
AL007 |
BSPP |
s5,Har1 |
- |
Zhang Lab |
Ida |
60bp |
6,610,330 |
12%
|
Dec 22 |
AL007 |
BSPP |
s6,Har2 |
- |
Zhang Lab |
Ida |
60bp |
5,347,364 |
20%
|
Dec 22 |
AL007 |
BSPP |
s7,Har3 |
- |
Zhang Lab |
Ida |
60bp |
15,243,209 |
26%
|
Dec 22 |
AL007 |
BSPP |
s8,Har4 |
- |
Zhang Lab |
Ida |
60bp |
14,904,014 |
24%
|
Dec 18 |
AL006 |
DigiQuant |
s2,PCR-CV-hiPS-F(w/phiX) |
- |
Zhang Lab |
Alice |
60bp |
18,527,480
|
Dec 18 |
AL006 |
RRS |
s3,DpnII-CV-Fibroblast1 |
- |
Zhang Lab |
Kun |
60bp |
9,278,480
|
Dec 18 |
AL006 |
RRS |
s4,DpnII-CV-hiPS-F |
- |
Zhang Lab |
Kun |
60bp |
7,530,675
|
Dec 18 |
AL006 |
Exome |
s5,PGP8C |
- |
Zhang Lab |
Billy/Luhan |
60bp |
11,320,511
|
Dec 18 |
AL006 |
Exome |
s6,PGP9 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
7,466,479
|
Dec 18 |
AL006 |
BSPP |
s7,Har9 |
- |
Zhang Lab |
Jie |
60bp |
16,529,111 |
28%
|
Dec 18 |
AL006 |
BSPP |
s8,Har10 |
- |
Zhang Lab |
Jie |
60bp |
15,507,608 |
11%
|
Dec 09 |
HL029 |
Exome |
s1,PGP4, #8-9 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
11,299,862
|
Dec 09 |
HL029 |
Exome |
s2,PGP6, #8-9 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
10,572,824
|
Dec 09 |
HL029 |
Exome |
s3,PGP9 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
9,577,578
|
Dec 09 |
HL029 |
Exome |
s4,PGP10,#8-9 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
13,012,173
|
Dec 09 |
HL029 |
Exome |
s5,CV-hiPS-B |
- |
Zhang Lab |
Alan |
60bp |
16,316,464
|
Dec 09 |
HL029 |
Exome |
s6,CV-hiPS-B |
- |
Zhang Lab |
Alan |
60bp |
17,365,795
|
Dec 09 |
HL029 |
Exome |
s7,CV-hiPS-B |
- |
Zhang Lab |
Alan |
60bp |
16,012,994
|
Dec 09 |
HL029 |
Exome |
s8,CV-hiPS-B |
- |
Zhang Lab |
Alan |
60bp |
1,602,572
|
Dec 06 |
HL028 |
RRS |
s1,Dpn-CV-F2 |
- |
Zhang Lab |
Kun |
60bp |
7,073,505
|
Dec 06 |
HL028 |
RRS |
s2,Dpn-CV-F2 |
- |
Zhang Lab |
Kun |
60bp |
7,060,114
|
Dec 06 |
HL028 |
RRS |
s3,Dpn-CV-iF2 |
- |
Zhang Lab |
Kun |
60bp |
6,001,805
|
Dec 06 |
HL028 |
RRS |
s4,Dpn-CV-iF2 |
- |
Zhang Lab |
Kun |
60bp |
3,264,795
|
Dec 06 |
HL028 |
Exome |
s5,CV-iB (A,C) |
- |
Zhang Lab |
Billy/Luhan |
60bp |
7,511,894
|
Dec 06 |
HL028 |
Exome |
s6,PGP8D |
- |
Zhang Lab |
Billy/Luhan |
60bp |
9,310,623
|
Dec 06 |
HL028 |
Exome |
s7,PGP8E |
- |
Zhang Lab |
Billy/Luhan |
60bp |
11,224,269
|
Dec 06 |
HL028 |
Exome |
s8,PGP8 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
5,999,123
|
Dec 02 |
HL027 |
RRS |
s1,Dpn-CV-iB1 |
- |
Zhang Lab |
Kun |
60bp |
10,747,192
|
Dec 02 |
HL027 |
RRS |
s2,Dpn-CV-iF1 |
- |
Zhang Lab |
Kun |
60bp |
9,030,411
|
Dec 02 |
HL027 |
RRS |
s3,Dpn-CV-F1 |
- |
Zhang Lab |
Kun |
60bp |
9,935,148
|
Dec 02 |
HL027 |
RRS |
s4,CV-iB (A,C) |
- |
Zhang Lab |
Alan |
60bp |
13,456,232
|
Dec 02 |
HL027 |
Exome |
s5,CV-iB (A,C) |
- |
Zhang Lab |
Alan |
60bp |
13,137,026
|
Dec 02 |
HL027 |
Exome |
s6,CV-iB (B,D,E) |
- |
Zhang Lab |
Alan |
60bp |
16,102,120
|
Dec 02 |
HL027 |
Exome |
s7,CV-iB (B,D,E) |
- |
Zhang Lab |
Alan |
60bp |
15,933,168
|
Dec 02 |
HL027 |
Exome |
s8,PGP8a |
- |
Zhang Lab |
Billy/Luhan |
60bp |
11,956,198
|
Nov 27 |
HL026 |
Exome |
s1,CV-fibroblast (Alice) |
- |
Zhang Lab |
Alan |
60bp |
17,121,798
|
Nov 27 |
HL026 |
Exome |
s2,CVF-N(Covaris) |
- |
Zhang Lab |
Alan |
60bp |
12,577,956
|
Nov 27 |
HL026 |
Exome |
s3,CVF-N(Covaris) |
- |
Zhang Lab |
Alan |
60bp |
11,767,869
|
Nov 27 |
HL026 |
Exome |
s4,CVF-N(Covaris) |
- |
Zhang Lab |
Alan |
60bp |
12,212,818
|
Nov 27 |
HL026 |
Exome |
s5,CV-iPS (#1-7) |
- |
Zhang Lab |
Alan |
60bp |
18,413,190
|
Nov 27 |
HL026 |
Exome |
s6,DF6(#1-7) |
- |
Zhang Lab |
Alan |
60bp |
18,035,161
|
Nov 27 |
HL026 |
Exome |
s7,Foreskin(#1-7) |
- |
Zhang Lab |
Alan |
60bp |
17,939,296
|
Nov 27 |
HL026 |
Exome |
s8,CVF-N(USER/S1, A/B) |
- |
Zhang Lab |
Alan |
60bp |
9,364,209
|
Nov 27 |
HL025 |
Exome |
s1,PGP3 #8-9 |
- |
Zhang Lab |
Alan |
60bp |
9,106,173
|
Nov 27 |
HL025 |
Exome |
s2,PGP5 #8-9 |
- |
Zhang Lab |
Alan |
60bp |
10,174,527
|
Nov 23 |
HL025 |
Exome |
s3,PGP7 #8-9 |
- |
Zhang Lab |
Alan |
60bp |
16,653,644
|
Nov 23 |
HL025 |
Exome |
s4,CpgSeq Harvard #2 |
- |
Zhang Lab |
Jie |
60bp |
failed
|
Nov 23 |
HL025 |
Exome |
s5,CpgSeq Harvard #5 |
- |
Zhang Lab |
Jie |
60bp |
12914061
|
Nov 23 |
HL025 |
Exome |
s6,CV-fibroblast #1-7 (Alice) |
- |
Zhang Lab |
Alan |
60bp |
17,745,112
|
Nov 23 |
HL025 |
Exome |
s7,CV-iPS #1-7 (Alice) |
- |
Zhang Lab |
Alan |
60bp |
18,466,358
|
Nov 23 |
HL025 |
Exome |
s8,CV-fibroblast New (#6-7) |
- |
Zhang Lab |
Alan |
60bp |
10,392,332
|
Nov 19 |
HL024 |
Exome |
s1,PGP1L, set 1-7 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
16,060,639
|
Nov 19 |
HL024 |
Exome |
s2,PGP1L, set 1-7 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
16,406,685
|
Nov 19 |
HL024 |
Exome |
s3,PGP1L, set 8 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
13,861,016
|
Nov 19 |
HL024 |
Exome |
s4,PGP1L, set 9 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
12,455,546
|
Nov 19 |
HL024 |
Hap |
s5,N12 |
- |
Zhang Lab |
Sam |
60bp |
11,320,511
|
Nov 19 |
HL024 |
Exome |
s6,PGP8B |
- |
Zhang Lab |
Billy/Luhan |
60bp |
7,466,479
|
Nov 19 |
HL024 |
BCM |
s7,P1 (Baylor) |
- |
Zhang Lab |
Baylor |
60bp |
4,934,597
|
Nov 19 |
HL024 |
BCM |
s8,P4 (Baylor) |
- |
Zhang Lab |
Baylor |
60bp |
1,602,572
|
Nov 13 |
HL023 |
Exome |
s1,PGP1-iPS, set 1-7 |
- |
Zhang Lab |
Alan(11/05) |
60bp |
12,404,414
|
Nov 13 |
HL023 |
Exome |
s2,PGP1-iPS, set 1-7 |
- |
Zhang Lab |
Alan(11/05) |
60bp |
13,314,169
|
Nov 13 |
HL023 |
Exome |
s3,PGP1-iPS, set 8 |
- |
Zhang Lab |
Alan(11/05) |
60bp |
16,787,057
|
Nov 13 |
HL023 |
Exome |
s4,PGP1-iPS, set 9 |
- |
Zhang Lab |
Alan(11/05) |
60bp |
15,362,879
|
Nov 13 |
HL023 |
Exome |
s5,DF6-9-9, set 8 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
16,614,857
|
Nov 13 |
HL023 |
Exome |
s6,DF6-9-9, set 9 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
16,897,414
|
Nov 13 |
HL023 |
Exome |
s7,Foreskin, set 8 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
16,023,565
|
Nov 13 |
HL023 |
Exome |
s8,Foreskin, set 9 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
10,656,758
|
Nov 09 |
HL022 |
Exome |
s1,DF6-9-9, set 1-7 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
12,652,000
|
Nov 09 |
HL022 |
Exome |
s2,DF6-9-9, set 1-7 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
11,579,830
|
Nov 09 |
HL022 |
Exome |
s3,Foreskin, set 1-7 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
9,624,602
|
Nov 09 |
HL022 |
Exome |
s4,Foreskin, set 1-7 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
8,249,755
|
Nov 09 |
HL022 |
Exome |
s5,CV-iPS (new), set 1-7 |
- |
Zhang Lab |
Alan(11/05) |
60bp |
10,237,538
|
Nov 09 |
HL022 |
Exome |
s6,CV-iPS (new), set 1-7 |
- |
Zhang Lab |
Alan(11/05) |
60bp |
10,621,342
|
Nov 09 |
HL022 |
Exome |
s7,CV-iPS (new), set 1-7 |
- |
Zhang Lab |
Alan(11/05) |
60bp |
14,439,349
|
Nov 09 |
HL022 |
Exome |
s8, ChrWGA-N10 |
- |
Zhang Lab |
Sam |
60bp |
8,624,207
|
Oct 29 |
HL020 |
Exome |
s1,CV-iPS, set 8 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
15,416,990
|
Oct 29 |
HL020 |
Exome |
s2,CV-iPS, set 9 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
17,569,551
|
Oct 29 |
HL020 |
Exome |
s3,CV-fibroblast, set 8 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
16,895,701
|
Oct 29 |
HL020 |
Exome |
s4,CV-fibroblast, set 9 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
15,502,227
|
Oct 29 |
HL020 |
Exome |
s5,NA12878, set 8 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
16,231,983
|
Oct 29 |
HL020 |
Exome |
s6,NA12878, set 8 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
17,231,313
|
Oct 29 |
HL020 |
Exome |
s7,NA12878, set 9 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
16,903,121
|
Oct 29 |
HL020 |
Exome |
s8,NA12878, set 9 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
13,743,218
|
Oct 26 |
HL019 |
CTM |
s1,PGP1L-CTM1(HpaII) |
- |
Zhang Lab |
Zymo |
40bp |
|
Oct 26 |
HL019 |
CTM |
s2,PGP1L-CTM2(MspI) |
- |
Zhang Lab |
Zymo |
40bp |
|
Oct 26 |
HL019 |
CTM |
s3,PGP1L-CTM3(4-RE) |
- |
Zhang Lab |
Zymo |
40bp |
|
Oct 26 |
HL019 |
Exome |
s4,PGP4 |
- |
Zhang Lab |
Billy |
40bp |
|
Oct 26 |
HL019 |
Exome |
s5,PGP4 |
- |
Zhang Lab |
Billy |
40bp |
|
Oct 26 |
HL019 |
Exome |
s6,PGP6 |
- |
Zhang Lab |
Billy |
40bp |
|
Oct 26 |
HL019 |
Exome |
s7,PGP6 |
- |
Zhang Lab |
Billy |
40bp |
|
Oct 26 |
HL019 |
Exome |
s8,PGP10 |
- |
Zhang Lab |
Billy |
40bp |
|
Oct 23 |
HL018 |
Exome |
s1,PGP1-iPS |
- |
Zhang Lab |
Alice(10/09) |
40bp |
14,503,245
|
Oct 23 |
HL018 |
Exome |
s2,PGP1-iPS |
- |
Zhang Lab |
Alice(10/09) |
40bp |
14,834,731
|
Oct 23 |
HL018 |
Exome |
s3,NA12878_EL_140.2 |
- |
Zhang Lab |
Kun |
40bp |
16,130,004
|
Oct 23 |
HL018 |
Exome |
s4,NA12878_EL_140.2 |
- |
Zhang Lab |
Kun |
40bp |
16,868,359
|
Oct 23 |
HL018 |
Exome |
s5,NA12878_EL_140.2 |
- |
Zhang Lab |
Kun |
40bp |
18,464,088
|
Oct 23 |
HL018 |
Exome |
s6,NA12878_EL_140.2 |
- |
Zhang Lab |
Kun |
40bp |
18,744,329
|
Oct 23 |
HL018 |
Exome |
s7,CV-iPS |
- |
Zhang Lab |
Alice(10/09) |
40bp |
17,369,523
|
Oct 23 |
HL018 |
Exome |
s8,CV-Fibroblast |
- |
Zhang Lab |
Alice(10/09) |
40bp |
15,991,415
|
Oct 20 |
HL017 |
Exome |
s1,PGP1-iPS |
- |
Zhang Lab |
Alice(10/09) |
40bp |
16,124,303
|
Oct 20 |
HL017 |
Exome |
s2,DF6-9-9 |
- |
Zhang Lab |
Alice(10/09) |
40bp |
18,701,054
|
Oct 20 |
HL017 |
Exome |
s3,Foreskin |
- |
Zhang Lab |
Alice(10/09) |
40bp |
17,660,876
|
Oct 20 |
HL017 |
Exome |
s4,CV-iPS |
- |
Zhang Lab |
Alice(10/09) |
40bp |
17,798,921
|
Oct 20 |
HL017 |
Exome |
s5,CV-iPS |
- |
Zhang Lab |
Alice(10/09) |
40bp |
18,054,888
|
Oct 20 |
HL017 |
Exome |
s6,CV-fibroblast |
- |
Zhang Lab |
Alice(10/09) |
40bp |
18,120,291
|
Oct 20 |
HL017 |
Exome |
s7,NA12878_EL_140.2 |
- |
Zhang Lab |
Kun |
40bp |
17,106,926
|
Oct 20 |
HL017 |
Exome |
s8,NA12878_EL_140.3 |
- |
Zhang Lab |
Kun |
40bp |
17,261,477
|
Oct 18 |
HL016 |
Exome |
s1,CV-fibroblast |
- |
Zhang Lab |
Alice(10/09) |
40bp |
15,670,145
|
Oct 18 |
HL016 |
Exome |
s2,CV-fibroblast |
- |
Zhang Lab |
Alice(10/09) |
40bp |
15,907,544
|
Oct 18 |
HL016 |
Exome |
s3,CV-iPS |
- |
Zhang Lab |
Alice(10/09) |
40bp |
15,818,281
|
Oct 18 |
HL016 |
Exome |
s4,CV-iPS |
- |
Zhang Lab |
Alice(10/09) |
40bp |
16,080,730
|
Oct 18 |
HL016 |
Exome |
s5,DF6 |
- |
Zhang Lab |
Alice(10/09) |
40bp |
16,231,745
|
Oct 18 |
HL016 |
Exome |
s6,DF6 |
- |
Zhang Lab |
Alice(10/09) |
40bp |
16,377,593
|
Oct 18 |
HL016 |
Exome |
s7,Foreskin |
- |
Zhang Lab |
Alice(10/09) |
40bp |
15,732,166
|
Oct 18 |
HL016 |
Exome |
s8,Foreskin |
- |
Zhang Lab |
Alice(10/09) |
40bp |
15,019,512
|
Oct 15 |
HL015 |
Exome |
s1,PGP8 |
- |
Zhang Lab |
Billy |
40bp |
13,429,437
|
Oct 15 |
HL015 |
Exome |
s2,PGP8 |
- |
Zhang Lab |
Billy |
40bp |
13,978,474
|
Oct 15 |
HL015 |
Exome |
s3,PGP8 |
- |
Zhang Lab |
Billy |
40bp |
13,935,910
|
Oct 15 |
HL015 |
Exome |
s4,PGP9 |
- |
Zhang Lab |
Billy |
40bp |
13,692,249
|
Oct 15 |
HL015 |
Exome |
s5,PGP9 |
- |
Zhang Lab |
Billy |
40bp |
12,912,972
|
Oct 15 |
HL015 |
Exome |
s6,PGP9 |
- |
Zhang Lab |
Billy |
40bp |
12,823,767
|
Oct 15 |
HL015 |
Exome |
s7,NA12878 |
- |
Zhang Lab |
Billy |
40bp |
16,883,674
|
Oct 15 |
HL015 |
Exome |
s8,NA12878 |
- |
Zhang Lab |
Billy |
40bp |
15,379,183
|
Oct 12 |
HL014 |
Exome |
s1,DF6-9-9 |
- |
Zhang Lab |
Alice(10/09) |
40bp |
8,305,141
|
Oct 12 |
HL014 |
Exome |
s2,foreskin |
- |
Zhang Lab |
Alice(10/09) |
40bp |
8,488,946
|
Oct 12 |
HL014 |
Exome |
s3,PGP1-ips |
- |
Zhang Lab |
Alice(10/09) |
40bp |
5,966,433
|
Oct 12 |
HL014 |
Exome |
s4,CV-ips |
- |
Zhang Lab |
Alice(10/09) |
40bp |
4,351,085
|
Oct 12 |
HL014 |
Exome |
s5,CV-fibroblast |
- |
Zhang Lab |
Alice(10/09) |
40bp |
3,621,861
|
Oct 12 |
HL014 |
Exome |
s6,PGP7 |
- |
Zhang Lab |
Alice(10/09) |
40bp |
11,805,391
|
Oct 12 |
HL014 |
Exome |
s7,PGP8 |
- |
Zhang Lab |
Billy |
40bp |
14,330,453
|
Oct 12 |
HL014 |
Exome |
s8,PGP9 |
- |
Zhang Lab |
Billy |
40bp |
12,477,329
|
Oct 08 |
HL013 |
Exome |
s1,PGP1 |
- |
Zhang Lab |
Billy |
40bp |
14872773
|
Oct 08 |
HL013 |
Exome |
s2,PGP2 |
- |
Zhang Lab |
Billy |
40bp |
13777534
|
Oct 08 |
HL013 |
Exome |
s3,PGP3 |
- |
Zhang Lab |
Billy |
40bp |
10536677
|
Oct 08 |
HL013 |
Exome |
s4,PGP5 |
- |
Zhang Lab |
Billy |
40bp |
8445974
|
Oct 08 |
HL013 |
BSPP-30k |
s5,DF6-9-9-cpg30k |
- |
Zhang Lab |
Ida |
40bp |
9684020
|
Oct 08 |
HL013 |
BSPP-30k |
s6,Foreskin |
- |
Zhang Lab |
Ida |
40bp |
13740681
|
Oct 08 |
HL013 |
USC-Hsieh |
s7,USC,MH010B xMboI |
- |
Zhang Lab |
Kyle |
40bp |
18388915
|
Oct 08 |
HL013 |
USC-Hsieh |
s8,USC,TCF #3 |
- |
Zhang Lab |
Kyle |
40bp |
14866071
|
Oct 05 |
HL011 |
Exome |
s1,PGP8 |
- |
Zhang Lab |
Billy |
40bp |
|
Oct 05 |
HL011 |
Exome |
s2,PGP8 |
- |
Zhang Lab |
Billy |
40bp |
|
Oct 05 |
HL011 |
Exome |
s3,PGP9 |
- |
Zhang Lab |
Billy |
40bp |
|
Oct 05 |
HL011 |
Exome |
s4,PGP9 |
- |
Zhang Lab |
Billy |
40bp |
|
Oct 05 |
HL011 |
Exome |
s5,NA12878 |
- |
Zhang Lab |
Billy |
40bp |
|
Oct 05 |
HL011 |
Exome |
s6,NA12878 |
- |
Zhang Lab |
Billy |
40bp |
|
Oct 05 |
HL011 |
USC-Hsieh |
s7,USC,MH010B xMboI |
- |
Zhang Lab |
Kyle |
40bp |
|
Oct 05 |
HL011 |
USC-Hsieh |
s8,USC,TCF #3 |
- |
Zhang Lab |
Kyle |
40bp |
|
Oct 01 |
HL012 |
Exome |
s1,CV-ips (unsheared) |
- |
Zhang Lab |
Alice&Ida |
80bp |
16,072,089
|
Oct 01 |
HL012 |
Exome |
s2,CV-Fibr(unsheared) |
- |
Zhang Lab |
Alice&Ida |
80bp |
16,826,803
|
Oct 01 |
HL012 |
Exome |
s3,NA21687, Cpg97k |
- |
Zhang Lab |
Ida |
80bp |
8,235,105
|
Oct 01 |
HL012 |
Exome |
s4,PhiX |
- |
Zhang Lab |
Illumina |
80bp |
14,496,850
|
Oct 01 |
HL012 |
Exome |
s5,NA21781 |
- |
Zhang Lab |
Ida |
80bp |
0
|
Oct 01 |
HL012 |
Exome |
s6,NA21833 |
- |
Zhang Lab |
Ida |
80bp |
3,293,913
|
Oct 01 |
HL012 |
Exome |
s7,NA21660 |
- |
Zhang Lab |
Ida |
80bp |
8,297
|
Oct 01 |
HL012 |
Exome |
s8,NA21731 |
- |
Zhang Lab |
Ida |
80bp |
11,048,272 |
|
Sept 26 |
HL010 |
Exome |
s1,CV-ips |
- |
Zhang Lab |
Alice(09/21) |
40bp |
17,770,197 |
13,270,733
|
Sept 26 |
HL010 |
Exome |
s2,CV-ips |
- |
Zhang Lab |
Alice |
40bp |
17,143,085
|
Sept 26 |
HL010 |
Exome |
s3,CV-fibroblast |
- |
Zhang Lab |
Alice(09/21) |
40bp |
14,248,797 |
|
Sept 26 |
HL010 |
Exome |
s4,CV-fibroblast |
- |
Zhang Lab |
Alice(09/21) |
40bp |
13,741,749 |
|
Sept 26 |
HL010 |
Exome |
s5,DF6-9-9 |
- |
Zhang Lab |
Alice(09/21) |
40bp |
14,210,912
|
Sept 26 |
HL010 |
Exome |
s6,foreskin |
- |
Zhang Lab |
Alice(09/21) |
40bp |
14,514,230
|
Sept 26 |
HL010 |
Exome |
s7,PGP8 |
- |
Zhang Lab |
Billy |
40bp |
11,980,992 |
|
Sept 26 |
HL010 |
Exome |
s8,PGP9 |
- |
Zhang Lab |
Billy |
40bp |
13,292,848 |
|
Sept 23 |
AL003 |
Exome |
s1,DF6-9-9 |
- |
Zhang Lab |
Alice(09/21) |
40bp |
16,395,953 |
13,954,426
|
Sept 23 |
AL003 |
Exome |
s2,foreskin |
- |
Zhang Lab |
Alice(09/21) |
40bp |
17,323,121 |
14,344,756
|
Sept 23 |
AL003 |
Exome |
s3,PGP1-ips |
- |
Zhang Lab |
Alice(09/21) |
40bp |
17,005,060
|
Sept 23 |
AL003 |
Exome |
s4,CV-ips |
- |
Zhang Lab |
Alice(09/21) |
40bp |
17,848,289 |
13,344,177
|
Sept 23 |
AL003 |
Exome |
s5,CV-fibroblast |
- |
Zhang Lab |
Alice(09/21) |
40bp |
18,152,672 |
15,372,979
|
Sept 23 |
AL003 |
Exome |
s6,NA12878-3 |
- |
Zhang Lab |
Alice(09/21) |
40bp |
18,391,593 |
14,109,009
|
Sept 23 |
AL003 |
USC-Hsieh |
s7,DK4#2 |
- |
Zhang Lab |
Kyle |
40bp |
13,632,900 |
11,976,351
|
Sept 23 |
AL003 |
USC-HSieh |
s8,TK9 |
- |
Zhang Lab |
Kyle |
40bp |
16,272,821 |
15,168,255
|
Sept 18 |
AL002 |
Exome |
s1,DF6-9-9 |
- |
Zhang Lab |
Alice(09/15) |
40bp |
16,173,475
|
Sept 18 |
AL002 |
Exome |
s2,foreskin |
- |
Zhang Lab |
Alice(09/15) |
40bp |
10,863,012
|
Sept 18 |
AL002 |
Exome |
s3,CV-ips |
- |
Zhang Lab |
Alice(09/15) |
40bp |
8,306,219
|
Sept 18 |
AL002 |
Exome |
s4,CV-fibroblast |
- |
Zhang Lab |
Alice(09/15) |
40bp |
3,987,069
|
Sept 18 |
AL002 |
- |
s5,PhiX-2nd |
- |
Zhang Lab |
Alice |
40bp |
-
|
Sept 18 |
AL002 |
USC-Hsieh |
s6,MH001 H2 xHeaIII |
- |
Zhang Lab |
Kyle |
40bp |
19,490,463 |
18,566,845
|
Sept 18 |
AL002 |
USC-Hsieh |
s7,MH010B xDpnI |
- |
Zhang Lab |
Kyle |
40bp |
19,160,830 |
18,435,611
|
Sept 18 |
AL002 |
USC-Hsieh |
s8,Tk4 #2 |
- |
Zhang Lab |
Kyle |
40bp |
16,343,257 |
15,039,726
|
Sept 11 |
AL001 |
Exome |
s1,DF6-9-9 |
- |
Zhang Lab |
Alice |
40bp |
5,115,027
|
Sept 11 |
AL001 |
Exome |
s2,foreskin |
- |
Zhang Lab |
Alice |
40bp |
1,480,281
|
Sept 11 |
AL001 |
- |
s3,PhiX-2nd(re-amplified) |
- |
Zhang Lab |
Alice |
40bp |
12,640,504
|
Sept 11 |
AL001 |
- |
s4,PhiX |
- |
Zhang Lab |
- |
40bp |
12,737,950
|
Sept 11 |
AL001 |
BSPP |
s5,Na21660-cpg97k |
- |
Zhang Lab |
Jie |
40bp |
1,624,500 |
15%
|
Sept 11 |
AL001 |
BSPP |
s6,DFips-cpg30k+97k |
- |
Zhang Lab |
Jie |
40bp |
12,230,825 |
52%
|
Sept 11 |
AL001 |
USC-Hsieh |
s7,MH010B x DpnI |
- |
Zhang Lab |
Kyle |
40bp |
-
|
Sept 11 |
AL001 |
USC-Hsieh |
s8,Pol II |
- |
Zhang Lab |
Kyle |
40bp |
7,545,937 |
4,581,330
|
Sept 07 |
HL007 |
Exome |
s1,PGP4 |
- |
Zhang Lab |
Billy |
36bp |
12,221,023 |
-
|
Sept 07 |
HL007 |
Exome |
s2,PGP4 |
- |
Zhang Lab |
Billy |
36bp |
12,462,164 |
-
|
Sept 07 |
HL007 |
Exome |
s3,PGP6 |
- |
Zhang Lab |
Billy |
36bp |
12,781,093 |
-
|
Sept 07 |
HL007 |
Exome |
s4,PGP6 |
- |
Zhang Lab |
Billy |
36bp |
13,207,084 |
-
|
Sept 07 |
HL007 |
Exome |
s5,PGP10 |
- |
Zhang Lab |
Billy |
36bp |
11,853,340 |
-
|
Sept 07 |
HL007 |
Exome |
s6,PGP10 |
- |
Zhang Lab |
Billy |
36bp |
12,091,086 |
-
|
Sept 07 |
HL007 |
BSPP-97k |
s7,50192A |
- |
Zhang Lab |
Jie |
36bp |
17,131,060 |
29%
|
Sept 07 |
HL007 |
BSPP-97k |
s8,50192B |
- |
Zhang Lab |
Jie |
36bp |
16,378,655 |
28%
|
August 29 |
HL009-3 |
Exome |
s1,DF6-9-9 |
60nM |
Zhang Lab |
Alice |
40bp |
-
|
August 29 |
HL009-3 |
Exome |
s2,DF6-9-9 |
60nM |
Zhang Lab |
Alice |
40bp |
-
|
August 29 |
HL009-3 |
Exome |
s3,foreskin |
45nM |
Zhang Lab |
Alice |
40bp |
-
|
August 29 |
HL009-3 |
Exome |
s4,foreskin |
45nM |
Zhang Lab |
Alice |
40bp |
-
|
August 29 |
HL009-3 |
Exome |
s5,PGP1-ips |
38nM |
Zhang Lab |
Alice |
40bp |
-
|
August 29 |
HL009-3 |
Exome |
s6,CV-ips |
90nM |
Zhang Lab |
Alice |
40bp |
-
|
August 29 |
HL009-3 |
Exome |
s7,CV-fibroblast |
76nM |
Zhang Lab |
Alice |
40bp |
-
|
August 29 |
HL009-3 |
Exome |
s8,PGP1 |
34nM |
Zhang Lab |
Alice |
40bp |
-
|
August 26 |
HL008 |
Exome |
s1,PGP4 |
- |
Zhang Lab |
Billy |
40bp |
14295243 |
-
|
August 26 |
HL008 |
Exome |
s2,PGP6 |
- |
Zhang Lab |
Billy |
40bp |
15558898 |
-
|
August 26 |
HL008 |
Exome |
s3,PGP10 |
- |
Zhang Lab |
Billy |
40bp |
15871619 |
-
|
August 26 |
HL008 |
BSPP-97k |
s4,50192A |
- |
Zhang Lab |
Jie |
40bp |
10401608 |
-
|
August 26 |
HL008 |
BSPP-97k |
s5,50192B |
- |
Zhang Lab |
Jie |
40bp |
9693893 |
-
|
August 26 |
HL008 |
Exome |
s6,Foreskin |
- |
Zhang Lab |
Alice |
40bp |
14739764 |
-
|
August 26 |
HL008 |
Exome |
s7,PGP4(MmeI) |
- |
Zhang Lab |
Billy |
40bp |
12106286 |
-
|
August 26 |
HL008 |
Control |
s8,PhiX |
- |
Zhang Lab |
Illumina |
40bp |
10161944 |
-
|
August 16 |
HL006 |
Exome |
s1,DF6-9-9 |
- |
Zhang Lab |
Alice |
40bp |
5,684,406 |
-
|
August 16 |
HL006 |
Exome |
s2,Foreskin |
- |
Zhang Lab |
Alice |
40bp |
8,009,671 |
-
|
August 16 |
HL006 |
Exome |
s3,Foreskin-lig |
- |
Zhang Lab |
Alice |
40bp |
8,369,819 |
-
|
August 16 |
HL006 |
Exome |
s4,NA12878 |
- |
Zhang Lab |
Alice |
40bp |
7,487,512 |
-
|
August 16 |
HL006 |
Exome |
s5,NA12878-lig |
- |
Zhang Lab |
Alice |
40bp |
8,411,077 |
-
|
August 16 |
HL006 |
Exome |
s6,NA12878 |
- |
Zhang Lab |
Billy |
40bp |
8,556,271 |
-
|
August 16 |
HL006 |
Exome |
s7,PGP10 |
- |
Zhang Lab |
Billy |
40bp |
9,736,297 |
-
|
August 16 |
HL006 |
Control |
s8,PhiX |
- |
Zhang Lab |
Illumina |
40bp |
6,985,337 |
-
|
August 13 |
HL005 |
Exome |
NA12878 |
- |
Zhang lab |
Billy |
40bp |
15,666,228 |
|
August 13 |
HL005 |
Exome |
NA12878 |
- |
Zhang lab |
Billy |
40bp |
14,091,504 |
|
August 13 |
HL005 |
BSPP-97k |
Par1 |
- |
Zhang lab |
Jie Deng |
40bp |
10,385,536 |
3,005,889 |
12%
|
August 13 |
HL005 |
BSPP-97k |
Par9 |
- |
Zhang lab |
Jie Deng |
40bp |
7,537,771 |
3,430,524 |
21%
|
August 13 |
HL005 |
USC-Hsieh |
MH010B xMboI |
- |
Zhang lab |
Kyle |
40bp |
6,699,431 |
6,125,263
|
August 13 |
HL005 |
USC-Hsieh |
MH010B xDpnI |
- |
Zhang lab |
Kyle |
40bp |
2,204,512 |
2,094,844
|
August 13 |
HL005 |
Exome(end-sequencing) |
PGP2S-Phu |
54.5nM |
Zhang lab |
Alice Li |
40bp |
7,022,465 |
5,950,793
|
August 13 |
HL005 |
Exome(end-sequencing) |
PGP2S-iProof |
60.6nM |
Zhang lab |
Alice Li |
40bp |
5,798,969 |
4,756,952
|
August 09 |
HL004 |
Exome |
s1,DF6-9-9-lig |
- |
Zhang Lab |
Alice |
40bp |
17,147,112 |
-
|
August 09 |
HL004 |
Exome |
s2,DF6-9-9-lig |
- |
Zhang Lab |
Alice |
40bp |
16,956,048 |
-
|
August 09 |
HL004 |
Exome |
s3,Foreskin-lig |
- |
Zhang Lab |
Alice |
40bp |
16,802,403 |
-
|
August 09 |
HL004 |
Exome |
s4,PGP10 |
- |
Zhang Lab |
Billy |
40bp |
18,644,730 |
-
|
August 09 |
HL004 |
Exome |
s5,PGP4 |
- |
Zhang Lab |
Billy |
40bp |
18,809,762 |
-
|
August 09 |
HL004 |
Exome |
s6,PGP4 |
- |
Zhang Lab |
Billy |
40bp |
18,970,955 |
-
|
August 09 |
HL004 |
Exome |
s7,PGP6 |
- |
Zhang Lab |
Billy |
40bp |
18,723,412 |
-
|
August 09 |
HL004 |
Exome |
s8,PGP6 |
- |
Zhang Lab |
Billy |
40bp |
19,233,480 |
-
|
August 05 |
HL003 |
Exome |
s1,DF6-9-9 |
- |
Zhang Lab |
Alice |
40bp |
4,417,586 |
2,288,789
|
August 05 |
HL003 |
Exome |
s2,Foreskin |
- |
Zhang Lab |
Alice |
40bp |
5,020,353 |
3,214,546
|
August 05 |
HL003 |
Exome |
s3,Foreskin-lig |
- |
Zhang Lab |
Alice |
40bp |
6,660,328 |
3,119,331
|
August 05 |
HL003 |
Exome |
s4,NA12878 |
- |
Zhang Lab |
Alice |
40bp |
3,727,520 |
1,981,326
|
August 05 |
HL003 |
Exome |
s5,NA12878-lig |
- |
Zhang Lab |
Alice |
40bp |
6,455,281 |
3,253,093
|
August 05 |
HL003 |
Exome |
s6,NA12878 |
- |
Zhang Lab |
Billy |
40bp |
14,992,076 |
8,643,897
|
August 05 |
HL003 |
Exome |
s7,PGP10 |
- |
Zhang Lab |
Billy |
40bp |
19,423,381 |
11,040,240
|
August 05 |
HL003 |
Control |
s8,PhiX |
- |
Zhang Lab |
Illumina |
40bp |
20,078,536 |
19,817,515
|
July 28 |
HL002 |
Exome |
s1,PhiX |
- |
Zhang Lab |
Illumina |
40bp |
19474917 |
-
|
July 28 |
HL002 |
Exome |
s2,Hues 6 ES-Dscp |
- |
Zhang Lab |
Kun |
40bp |
9991852 |
-
|
July 28 |
HL002 |
Exome |
s3,Hues 6 ES-trp |
- |
Zhang Lab |
Kun |
40bp |
8386791 |
-
|
July 28 |
HL002 |
Exome |
s4,NA12878 |
- |
Zhang Lab |
Alice |
40bp |
15015962 |
-
|
July 28 |
HL002 |
Exome |
s5,NA12878 |
- |
Zhang Lab |
Alice |
40bp |
15092576 |
-
|
July 28 |
HL002 |
Exome |
s6,NA12878 |
- |
Zhang Lab |
Alice |
40bp |
15223607 |
-
|
July 28 |
HL002 |
Exome |
s7,PGP10 |
- |
Zhang Lab |
Alice |
40bp |
15059266 |
-
|
July 28 |
HL002 |
RNA |
s8,CES8k-Hybrid1-ES |
- |
Zhang Lab |
Kun |
40bp |
8178891 |
-
|
Jan-Jun
Month
|
Date
|
Probe Set
|
Tube label
|
Conc. x vol.
|
Seq facility
|
Lib. Const.
|
Read length
|
# filtered reads
|
# mappable reads
|
Feb |
6 |
BSPP-30k-PE |
BJ |
75.4nM x 15ul; |
BioGem |
Jie |
36bp x 2 |
7,662,828 |
2,535,784
|
Feb |
6 |
BSPP-30k-PE |
Hybrid_1 |
87.6nM x 15ul; |
BioGem |
Jie |
36bp x 2 |
6,829,142 |
1,946,531
|
Feb |
6 |
BSPP-30k-PE |
PGP1_F |
106nM x 15ul; |
BioGem |
Jie |
36bp x 2 |
8,441,376 |
2,854,604
|
Feb |
6 |
BSPP-30k-PE |
HUES12 |
74.9nM x 15ul; |
BioGem |
Jie |
36bp x 2 |
7,404,514 |
1,424,697
|
Feb |
6 |
BSPP-30k-PE |
PGP1_iPS1 |
90.3nM x 15ul; |
BioGem |
Jie |
36bp x 2 |
5,617,832 |
1,899,427
|
Feb |
6 |
BSPP-30k-PE |
PGP1_L |
77.6nM x 15ul; |
BioGem |
Jie |
36bp x 2 |
5,258,188 |
2,220,886
|
Feb |
6 |
BSPP-30k-PE |
PGP3_L |
80.9nM x 15ul; |
BioGem |
Jie |
36bp x 2 |
5,286,442 |
1,838,971
|
Feb |
6 |
BSPP-30k-PE |
PGP9_L |
96.9nM x 15ul; |
BioGem |
Jie |
36bp x 2 |
5,689,552 |
2,292,028
|
|
|
|
|
|
|
|
March |
13 |
Exome |
PGP1-CTRL |
48.5ng/ul; 30ul |
Billy Li (Harvard) |
Alice Li |
40bp |
9,707,995 |
7,655,774
|
March |
13 |
Exome |
PGP1-shaked |
46ng/ul; 30ul |
Billy Li (Harvard) |
Alice Li |
40bp |
9,424,752 |
7,561,445
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
May |
25 |
Exome |
PGP1E0509A |
77nM; 40ul |
BioGem |
Alice Li |
76bp |
7,471,741 |
1,086,264
|
May |
25 |
Exome |
PGP2E0509A |
64nM; 40ul |
BioGem |
Alice Li |
76bp |
5,014,823 |
2,595,521
|
May |
25 |
Exome |
PGP3E0509A |
49.5nM; 40ul |
BioGem |
Alice Li |
76bp |
5,358,442 |
3,213,790
|
May |
25 |
Exome |
NA12878E0509A |
60nM; 40ul |
BioGem |
Alice Li |
76bp |
7,360,495 |
2,673,495
|
May |
25 |
Exome |
PGP1E0509k |
19nM; 40ul |
BioGem |
Kun Zhang |
76bp |
3,520,981 |
2,350,708
|
May |
25 |
Exome |
PGP2E0509k |
20nM; 40ul |
BioGem |
Kun Zhang |
76bp |
5,095,881 |
2,568,349
|
May |
25 |
Exome |
PGP3E0509k |
19nM; 40ul |
BioGem |
Kun Zhang |
76bp |
3,734,068 |
1,989,542
|
May |
25 |
Exome |
NA12878E0509k |
33nM; 40ul |
BioGem |
Kun Zhang |
76bp |
3,900,764 |
778,134
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
May |
26 |
BSPP_end seq |
NA21070*1 100406 captured targets |
25.3ng/ul (96nM) x 15ul; |
Yuan Gao |
Jie/Kun |
40bp |
2,535,463
|
May |
26 |
BSPP_end seq |
NA21070*1 100406 normalized captured targets |
23.1ng/ul (87nM) x 15ul; |
Yuan Gao |
Jie/Kun |
40bp |
2,377,687
|
|
|
|
|
|
|
|
May |
29 |
Exome(end sequencing) |
PGP2_052909A |
111nM; 15ul |
Yuan Gao |
Alice Li |
40bp |
6,390,979
|
May |
29 |
Exome(end sequencing) |
PGP3_052909A |
126nM; 15ul |
Yuan Gao |
Alice Li |
40bp |
6,110,991
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
June |
4 |
Exome |
PGP5-1-060809 |
62.5nM; 10ul |
BioGem |
Alice Li |
36bp |
14,404,283 |
10,812,047
|
June |
4 |
Exome |
PGP5-2-060809 |
65.7nM; 10ul |
BioGem |
Alice Li |
36bp |
14,994,770 |
11,253,456
|
June |
4 |
Exome |
PGP7-1-060809 |
75.5nM; 10ul |
BioGem |
Alice Li |
36bp |
13,384,832 |
9,712,648
|
June |
4 |
Exome |
PGP7-2-060809 |
79.7nM; 20ul |
BioGem |
Alice Li |
36bp |
14,204,382/13,509,137 |
10,519,374/9,961,481
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
June |
8 |
BSPP |
DF6-9-9_P16(4) |
11nM x 10ul x 2 lanes; |
BioGem |
Jie |
36bp |
4,688,926
|
June |
8 |
BSPP |
foreskin |
15nM x 10ul x 1 lane. |
BioGem |
Jie |
36bp |
3,320,865 |
1,825,557
|
|
|
|
|
|
|
|
June |
10 |
Exome |
PGP1-3-061009 |
34nM; 15ul |
Bing Ren |
Alice Li |
76bp |
5,802,565 |
|
June |
10 |
Exome |
PGP2-3-061009 |
25nM; 15ul |
Bing Ren |
Alice Li |
76bp |
3,193,644 |
|
June |
10 |
Exome |
PGP3-3-061009 |
22nM; 15ul |
Bing Ren |
Alice Li |
76bp |
2,465,788 |
|
June |
10 |
Exome |
NA12878-3-061009 |
22nM; 15ul |
Bing Ren |
Alice Li |
76bp |
1,285,265 |
|
June |
10 |
BSPP |
NA21070*1_100406_97k |
21.2nM x 14ul; |
Bing Ren |
Jie |
76bp |
2,682,703 |
424,191
|
June |
10 |
BSPP |
DF6-9-9_P16(4)_30k |
21.2nM x 14ul; |
Bing Ren |
Jie |
76bp |
918,811 |
151,519
|
June |
10 |
BSPP |
foreskin_30k |
21.2nM x 14ul; |
Bing Ren |
Jie |
76bp |
424,770 |
65,177
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
June |
18 |
Exome |
PGP5-1-060809 |
62.5nM; 5ul |
Bing Ren |
Alice Li |
41bp |
4,122,460
|
June |
18 |
Exome |
PGP5-2-060809 |
65.7nM; 5ul |
Bing Ren |
Alice Li |
41bp |
3,907,906
|
June |
18 |
Exome |
PGP7-1-060809 |
75.5nM; 5ul |
Bing Ren |
Alice Li |
41bp |
1,419,496
|
June |
18 |
CES27k9bp_end sequening |
Hybrid_1_CES27k9bp |
4.3ng/ul (37nM) x 5ul |
Bing Ren |
Jie |
41bp |
7,484,832
|
June |
18 |
CES27k9bp_end sequening |
BJ_CES27k9bp |
7.2ng/ul (62nM) x 5ul |
Bing Ren |
Jie |
41bp |
5,643,984
|
June |
18 |
BSPP |
DF6-9-9_P16(4)_97k_repeat |
11nM x 5ul |
Bing Ren |
Jie |
41bp |
4,761,133
|
June |
18 |
BSPP |
foreskin_97k_repeat |
7.5nM x 5ul |
Bing Ren |
Jie |
41bp |
6,683,303
|