Noi/NOTES/2014-9-14

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Summary of BSPP capture sequencing libraries and their corresponding index

Calendar

1) HiSeq Rapid run at Illumina (140912_D00171_0588)

Library ID Sample ID Zhang's lab Index Template type InputDNA amount (ng) BSPP set Sequencing platform/at Lane # Note
NP-BSPP_V5A_CRC-ctDNA-Sep10 cfDNA 4 WGBS library 100 MONOD V5 setA /CRC Rapid run/ILMN 1,2 ctDNA from Illumina. WGBS library generated 5ng of ctDNA.
NP-BSPP_V5A_CRC-ctDNA-Sep11 NORM1-02 P1 5 WGBS library 100 MONOD V5 setA /CRC Rapid run/ILMN 1,2 ctDNA from Illumina. WGBS library generated 5ng of ctDNA.
NP-BSPP_V5A_CRC-ctDNA-Sep12 NORM1-03 P1 6 WGBS library 100 MONOD V5 setA /CRC Rapid run/ILMN 1,2 ctDNA from Illumina. WGBS library generated 5ng of ctDNA.
NP-BSPP_V5A_CRC-ctDNA-Sep13 COLO2-03 7 WGBS library 100 MONOD V5 setA /CRC Rapid run/ILMN 1,2 ctDNA from Illumina. WGBS library generated 5ng of ctDNA.
NP-BSPP_V5A_CRC-ctDNA-Sep14 NC-6 13 WGBS library 100 MONOD V5 setA /CRC Rapid run/ILMN 1,2 Normal control plasma from Kang Zhang's lab. WGBS library generated from 1ng cfDNA.
NP-BSPP_V5A_CRC-ctDNA-Sep15 NC-9 14 WGBS library 100 MONOD V5 setA /CRC Rapid run/ILMN 1,2 Normal control plasma from Kang Zhang's lab. WGBS library generated from 1ng cfDNA.
NP-BSPP_V5A_CRC-ctDNA-Sep16 NC-27 15 WGBS library 100 MONOD V5 setA /CRC Rapid run/ILMN 1,2 Normal control plasma from Kang Zhang's lab. WGBS library generated from 1ng cfDNA.
NP-BSPP_V5A_CRC-ctDNA-Sep17 NC-30 16 WGBS library 100 MONOD V5 setA /CRC Rapid run/ILMN 1,2 Normal control plasma from Kang Zhang's lab. WGBS library generated from 1ng cfDNA.