Sample record
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- 2009
Month | Date | Probe Set | Tube label | Conc. x vol. | Seq facility | Lib. Const. | Read length | # filtered reads | # mappable reads |
Feb | 6 | CpG30k_paired end | BJ | 75.4nM x 15ul; | BioGem | Jie | |||
Feb | 6 | CpG30k_paired end | Hybrid_1 | 87.6nM x 15ul; | BioGem | Jie | |||
Feb | 6 | CpG30k_paired end | PGP1_F | 106nM x 15ul; | BioGem | Jie | |||
Feb | 6 | CpG30k_paired end | HUES12 | 74.9nM x 15ul; | BioGem | Jie | |||
Feb | 6 | CpG30k_paired end | PGP1_iPS1 | 90.3nM x 15ul; | BioGem | Jie | |||
Feb | 6 | CpG30k_paired end | PGP1_L | 77.6nM x 15ul; | BioGem | Jie | |||
Feb | 6 | CpG30k_paired end | PGP3_L | 80.9nM x 15ul; | BioGem | Jie | |||
Feb | 6 | CpG30k_paired end | PGP9_L | 96.9nM x 15ul; | BioGem | Jie | |||
March | 13 | Exome | PGP1-CTRL | 48.5ng/ul; 30ul | Billy Li (Harvard) | Alice Li | |||
March | 13 | Exome | PGP1-shaked | 46ng/ul; 30ul | Billy Li (Harvard) | Alice Li | |||
May | 25 | Exome | PGP1E0509A | 77nM; 40ul | BioGem | Alice Li | |||
May | 25 | Exome | PGP2E0509A | 64nM; 40ul | BioGem | Alice Li | |||
May | 25 | Exome | PGP3E0509A | 49.5nM; 40ul | BioGem | Alice Li | |||
May | 25 | Exome | NA12878E0509A | 60nM; 40ul | BioGem | Alice Li | |||
May | 25 | Exome | PGP1E0509k | 19nM; 40ul | BioGem | Kun Zhang | |||
May | 25 | Exome | PGP2E0509k | 20nM; 40ul | BioGem | Kun Zhang | |||
May | 25 | Exome | PGP3E0509k | 19nM; 40ul | BioGem | Kun Zhang | |||
May | 25 | Exome | NA12878E0509k | 33nM; 40ul | BioGem | Kun Zhang | |||
May | 26 | cpg97K_end sequencing | NA21070*1 100406 captured targets | 25.3ng/ul (96nM) x 15ul; | Yuan Gao | Jie | Kun | ||
May | 26 | cpg97K_end sequencing | NA21070*1 100406 normalized captured targets | 23.1ng/ul (87nM) x 15ul; | Yuan Gao | Jie | Kun | ||
May | 29 | Exome(end sequencing) | PGP2_052909A | 111nM; 15ul | Yuan Gao | Alice Li | |||
May | 29 | Exome(end sequencing) | PGP3_052909A | 126nM; 15ul | Yuan Gao | Alice Li | |||
June | 4 | Exome | PGP5-1-060809 | 62.5nM; 10ul | BioGem | Alice Li | |||
June | 4 | Exome | PGP5-2-060809 | 65.7nM; 10ul | BioGem | Alice Li | |||
June | 4 | Exome | PGP7-1-060809 | 75.5nM; 10ul | BioGem | Alice Li | |||
June | 4 | Exome | PGP7-2-060809 | 79.7nM; 20ul | BioGem | Alice Li | |||
June | 8 | cpg97k | DF6-9-9_P16(4) | 11nM x 10ul x 2 lanes; | BioGem | Jie | |||
June | 8 | cpg97k | foreskin | 15nM x 10ul x 1 lane. | BioGem | Jie | |||
June | 10 | Exome | PGP1-3-061009 | 34nM; 15ul | Bing Ren | Alice Li | |||
June | 10 | Exome | PGP2-3-061009 | 25nM; 15ul | Bing Ren | Alice Li | |||
June | 10 | Exome | PGP3-3-061009 | 22nM; 15ul | Bing Ren | Alice Li | |||
June | 10 | Exome | NA12878-3-061009 | 22nM; 15ul | Bing Ren | Alice Li | |||
June | 10 | cpg97k | NA21070*1_100406_97k | 21.2nM x 14ul; | Bing Ren | Jie | |||
June | 10 | cpg30k | DF6-9-9_P16(4)_30k | 21.2nM x 14ul; | Bing Ren | Jie | |||
June | 10 | cpg30k | foreskin_30k | 21.2nM x 14ul; | Bing Ren | Jie | |||
June | 18 | Exome | PGP5-1-060809 | 62.5nM; 5ul | Bing Ren | Alice Li | |||
June | 18 | Exome | PGP5-2-060809 | 65.7nM; 5ul | Bing Ren | Alice Li | |||
June | 18 | Exome | PGP7-1-060809 | 75.5nM; 5ul | Bing Ren | Alice Li | |||
June | 18 | CES27k9bp_end sequening | Hybrid_1_CES27k9bp | 4.3ng/ul (37nM) x 5ul | Bing Ren | Jie | |||
June | 18 | CES27k9bp_end sequening | BJ_CES27k9bp | 7.2ng/ul (62nM) x 5ul | Bing Ren | Jie | |||
June | 18 | cpg97k | DF6-9-9_P16(4)_97k_repeat | 11nM x 5ul | Bing Ren | Jie | |||
June | 18 | cpg97k | foreskin_97k_repeat | 7.5nM x 5ul | Bing Ren | Jie | |||