Sample record

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Revision as of 21:14, 15 July 2011 by >Alan6017518 (→‎2011)
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2011

Jul-Dec

Date Run Lane Tube Label Seq facility Read length # filtered reads (bps)
110714 HL098 S1 Al-Exome-D+E+F-Jun10/RL-RNAseq-1_6-Jul12 Zhang Lab 80+7+80 N/A
110714 HL098 S2 AL-Exome-CVI+CVB-Jun29 Zhang Lab 80+7+80 N/A
110714 HL098 S3 AL-Exome-CVI+CVB-Jun29 Zhang Lab 80+7+80 N/A
110714 HL098 S4 AL-Exome-CVI+CVB-Jun29 Zhang Lab 80+7+80 N/A
110714 HL098 S5 AL-Exome-CVI+CVB-Jun29 Zhang Lab 80+7+80 N/A
110714 HL098 S6 AL-Exome-CVI+CVB-Jun29 Zhang Lab 80+7+80 N/A
110714 HL098 S7 AL-Exome-CVI+CVB-Jun29 Zhang Lab 80+7+80 N/A
110714 HL098 S8 AL-Exome-CVI+CVB-Jun29 Zhang Lab 80+7+80 N/A

Jan-Jun

Date Run Lane Tube Label Seq facility Read length # filtered reads (bps)
110626 HL097 S1 AL-Exome-12plex-Jun19 Zhang Lab 80+7 2,990,440,000
110626 HL097 S2 AL-Exome-12plex-Jun19 Zhang Lab 80+7 3,109,455,000
110626 HL097 S3 AL-Exome-12plex-Jun19 Zhang Lab 80+7 3,069,859,000
110626 HL097 S4 AL-Exome-12plex-Jun19 Zhang Lab 80+7 3,054,658,000
110626 HL097 S5 AL-Exome-12plex-Jun19 Zhang Lab 80+7 3,055,581,000
110626 HL097 S6 AL-Exome-12plex-Jun19 Zhang Lab 80+7 3,022,079,000
110626 HL097 S7 AL-Exome-12plex-Jun19 Zhang Lab 80+7 2,973,142,000
110626 HL097 S8 AL-Exome-12plex-Jun19 Zhang Lab 80+7 2,858,595,000
110619 HL096 S1 AL-Exome-12plex-Jun19 Zhang Lab 80+7+80 3,096,873,000
110619 HL096 S2 AL-Exome-12plex-Jun19 Zhang Lab 80+7+80 3,142,447,000
110619 HL096 S3 AL-Exome-12plex-Jun19 Zhang Lab 80+7+80 3,152,777,000
110619 HL096 S4 AL-Exome-12plex-Jun19 Zhang Lab 80+7+80 3,146,637,000
110619 HL096 S5 AL-Exome-12plex-Jun19 Zhang Lab 80+7+80 3,130,481,000
110619 HL096 S6 AL-Exome-12plex-Jun19 Zhang Lab 80+7+80 3,113,755,000
110619 HL096 S7 AL-Exome-12plex-Jun19 Zhang Lab 80+7+80 3,140,271,000
110619 HL096 S8 AL-Exome-12plex-Jun19 Zhang Lab 80+7+80 3,063,317,000
110619 HL096 S1 AL-Exome-12plex-Jun19 Zhang Lab 80+7+80
110619 HL096 S2 AL-Exome-12plex-Jun19 Zhang Lab 80+7+80
110619 HL096 S3 AL-Exome-12plex-Jun19 Zhang Lab 80+7+80
110619 HL096 S4 AL-Exome-12plex-Jun19 Zhang Lab 80+7+80
110619 HL096 S5 AL-Exome-12plex-Jun19 Zhang Lab 80+7+80
110619 HL096 S6 AL-Exome-12plex-Jun19 Zhang Lab 80+7+80
110619 HL096 S7 AL-Exome-12plex-Jun19 Zhang Lab 80+7+80
110619 HL096 S8 AL-Exome-12plex-Jun19 Zhang Lab 80+7+80
110608 HL095 S1 AL-Exome-e7_B#2-Jun1 Zhang Lab 80+7 2,948,051,000
110608 HL095 S2 AL-Exome-e7_B#2-Jun1 Zhang Lab 80+7 3,072,660,000
110608 HL095 S3 UCSD-MH-EColi1_4-May4 Zhang Lab 80+7 2,863,441,000
110608 HL095 S4 RL-Hap_RNAseq-1_13-Jun6 Zhang Lab 80+7 1,552,728,000
110608 HL095 S5 AL-Exome-e7_A#4-Jun1 Zhang Lab 80+7 3,083,656,000
110608 HL095 S6 AL-Exome-e7_A#4-Jun1 Zhang Lab 80+7 3,123,515,000
110608 HL095 S7 AL-Exome-e7_5#9-Jun1 Zhang Lab 80+7 3,016,211,000
110608 HL095 S8 AL-Exome-e7_5#9-Jun1 Zhang Lab 80+7 2,951,944,000
110514 HL094 S1 NP-Lib_free_Ind1_24-May3 Zhang Lab 110+7+110 4,581,981,000
110514 HL094 S2 NP-Lib_free_Ind1_24-May3 Zhang Lab 110+7+110 4,742,654,000
110514 HL094 S3 NP-Lib_free_Ind1_24-May3 Zhang Lab 110+7+110 4,721,226,000
110514 HL094 S4 NP-Lib_free_Ind1_24-May3 + HC-MDA-Mouse_2h_C5-Mar2 Zhang Lab 110+7+110 4,538,689,000
110514 HL094 S5 NP-Lib_free_Ind1_24-May3 Zhang Lab 110+7+110 4,818,462,000
110514 HL094 S6 NP-Lib_free_Ind1_24-May3 Zhang Lab 110+7+110 4,789,628,000
110514 HL094 S7 NP-Lib_free_Ind1_24-May3 Zhang Lab 110+7+110 4,730,124,000
110514 HL094 S8 NP-Lib_free_Ind1_24-May3 Zhang Lab 110+7+110 4,668,899,000
110417 HL093 S1 AL-SCG-4_Plex-Feb14 Zhang Lab 80+6 1,885,472,000
110417 HL093 S2 AL-SCG-4_Plex-Feb14 Zhang Lab 80+6 1,944,884,000
110417 HL093 S3 AL-SCG-4_Plex-Feb14 Zhang Lab 80+6 1,926,253,000
110417 HL093 S4 AL-SCG-4_Plex-Feb14 Zhang Lab 80+6 1,886,033,000
110417 HL093 S5 AL-Genome-PGP1F-Jul30 Zhang Lab 80+6 2,231,073,000
110417 HL093 S6 AL-Genome-PGP1ips-Jul30 Zhang Lab 80+6 2,269,443,000
110417 HL093 S7 AL-Exome-HGPS(2)-Apr10 Zhang Lab 80+6 2,863,990,000
110417 HL093 S8 AL-Exome-HGPS(2)-Apr10 Zhang Lab 80+6 2,743,128,000
110408 HL092 S1 Al-Exome-HFF1013-Mar18 Zhang Lab 100+6 2,522,988,000
110408 HL092 S2 Al-Exome-e75#4-Mar18 Zhang Lab 100+6 2,567,812,000
110408 HL092 S3 AL-SCG-4_Plex-Feb14 Zhang Lab 100+6 197,385,000
110408 HL092 S4 AL-SCG-4_Plex-Feb14 Zhang Lab 100+6 208,528,000
110408 HL092 S5 AL-Genome-PGP1F-Jul30 Zhang Lab 100+6 798,720,000
110408 HL092 S6 UCSD-MH-1_10-Mar28+JG-Microbiome-Ecoli_test-Mar22 Zhang Lab 100+6 2,548,739,000
110408 HL092 S7 UCSD-MH-11_21-Mar28+JG-Microbiome-Ecoli_test-Mar22 Zhang Lab 100+6 2,359,216,000
110408 HL092 S8 AL-Genome-PGP1ips-Jul30 Zhang Lab 100+6 850,078,000
110323 HL091 S1 NP-220K-Belmonte_Ind8-12-March10 Zhang Lab 100+6 2,756,670,000
110323 HL091 S2 NP-220K-Belmonte_Ind8-12-March10 Zhang Lab 100+6 2,858,982,000
110323 HL091 S3 Al-Exome-e7B#1-Mar18 Zhang Lab 100+6 3,856,415,000
110323 HL091 S4 Al-Exome-e7B#1-Mar18 Zhang Lab 100+6 3,829,631,000
110323 HL091 S5 Al-Exome-e7A#1-Mar18 Zhang Lab 100+6 3,659,345,000
110323 HL091 S6 Al-Exome-e7A#1-Mar18 Zhang Lab 100+6 3,652,533,000
110323 HL091 S7 Al-Exome-HFF1013-Mar18 Zhang Lab 100+6 3,768,226,000
110323 HL091 S8 Al-Exome-e75#4-Mar18 Zhang Lab 100+6 3,227,472,000
110318 HL090 S1 AL-Exome-cAWS#1-Mar18 Zhang Lab 80
110318 HL090 S2 AL-Exome-cAWS#1-Mar18 Zhang Lab 80
110318 HL090 S3 AL-Exome-HGPS-Mar18 Zhang Lab 80
110318 HL090 S4 AL-Exome-HGPS-Mar18 Zhang Lab 80
110318 HL090 S5 AL-Exome-cHGPS#1-Mar18 Zhang Lab 80
110318 HL090 S6 AL-Exome-cHGPS#1-Mar18 Zhang Lab 80
110318 HL090 S7 Al-Exome-AWS-Mar18 Zhang Lab 80
110318 HL090 S8 Al-Exome-AWS-Mar18 Zhang Lab 80
110307 HL089 S1 NP-220K-PGP_Exp1-3_Ind1-7-Feb14 Zhang Lab 80+6+80
110307 HL089 S2 NP-220K-PGP_Exp1-3_Ind1-7-Feb14 Zhang Lab 80+6+80
110307 HL089 S3 NP-220K-Parkinson_Ind1-18-Feb15 Zhang Lab 80+6+80
110307 HL089 S4 NP-220K-Parkinson_Ind1-18-Feb15 Zhang Lab 80+6+80
110307 HL089 S5 NP-220K-Parkinson_Ind1-18-Feb15 Zhang Lab 80+6+80
110307 HL089 S6 NP-220K-Parkinson_Ind1-18-Feb15 Zhang Lab 80+6+80
110307 HL089 S7 NP-220K-Parkinson_Ind1-18-Feb15 Zhang Lab 80+6+80
110307 HL089 S8 NP-220K-Parkinson_Ind1-18-Feb15 Zhang Lab 80+6+80
110303 HL088 S1 AL-MsExome-2eiPS2P5-Feb4 Zhang Lab 80+6 2,735,432,000
110303 HL088 S2 AL-MsExome-2eiPS2P5-Feb4 Zhang Lab 80+6 2,802,442,000
110303 HL088 S3 AL-MsExome-Ie12P20-Feb4 Zhang Lab 80+6 2,676,336,000
110303 HL088 S4 AL-MsExome-Ie12P20-Feb4 Zhang Lab 80+6 2,683,055,000
110303 HL088 S5 AL-MsExome-B6MEF-Feb4 Zhang Lab 80+6 2,612,353,000
110303 HL088 S6 AL-MsExome-B6MEF-Feb4 Zhang Lab 80+6 2,650,632,000
110303 HL088 S7 AL-Exome-HuSc-Mar2 Zhang Lab 80+6 2,688,100,000
110303 HL088 S8 NP-220K-African_UPenn1_3-Feb16 Zhang Lab 80+6 2,856,129,000
110119 HL087 S1 AL-exome-2HFF_P6-Jan16 Zhang Lab 80+7+80 3,152,150,000
110119 HL087 S2 AL-exome-2HFF_7_10_3M-Jan16 Zhang Lab 80+7+80 3,216,929,000
110119 HL087 S3 AL-exome-2HFF_8d_10-Jan16 Zhang Lab 80+7+80 3,230,879,000
110119 HL087 S4 HC-MDA-Ecoli-SAGs(NX1-NX8)-Jan17 Zhang Lab 80+7+80 2,531,830,000
110119 HL087 S5 MouseMetaGen.SetA.Ind13to16-Dec15 Zhang Lab 80+7+80 2,831,831,000
110119 HL087 S6 MouseMetaGen.SetA.Ind13to16-Dec15 Zhang Lab 80+7+80 2,788,825,000
110119 HL087 S7 MouseMetaGen.SetA.Ind13to16-Dec15 Zhang Lab 80+7+80 2,804,556,000
110119 HL087 S8 MouseMetaGen.SetA.Ind13to16-Dec15 Zhang Lab 80+7+80 2,755,653,000
110112 HL086 S1 NP-PGP.Ind13to21-Dec14 Zhang Lab 100+6 2,946,977,000
110112 HL086 S2 NP-PGP.Ind13to21-Dec14 Zhang Lab 100+6 3,142,124,000
110112 HL086 S3 NP-PGP.Ind13to21-Dec14 Zhang Lab 100+6 3,043,874,000
110112 HL086 S4 NP-PGP.Ind13to21-Dec14 Zhang Lab 100+6 3,134,949,000
110112 HL086 S5 NP-PGP.Ind13to21-Dec14 Zhang Lab 100+6 3,031,047,000
110112 HL086 S6 NP-TumorJHU.Ind1to48-Dec18 Zhang Lab 100+6 3,476,486,000
110112 HL086 S7 NP-AfricanUPenn.Ind1to48-Jan3 Zhang Lab 100+6 3,599,069,000
110112 HL086 S8 NP-AfricanUPenn.Ind1to48-Jan3 Zhang Lab 100+6 3,505,520,000

2010

Jul-Dec

Date Run Lane Tube Label Seq facility Read length # filtered reads (bps)
101209 HL085 S1 AL-Exome-aMSC_p7-Dec7 Zhang Lab 80+7+80 2,801,366,000
101209 HL085 S2 AL-Exome-MSC_iPS4_p14-Dec7 Zhang Lab 80+7+80 2,963,206,000
101209 HL085 S3 AL-Exome-MSC_iPS8_p14-Dec7 Zhang Lab 80+7+80 3,149,351,000
101209 HL085 S4 AL-Exome-KiPS3F7_p29-Dec7 Zhang Lab 80+7+80 2,935,861,000
101209 HL085 S5 NP-Mm-IMR90-Nov23 Zhang Lab 80+7+80 2,590,543,000
101209 HL085 S6 NP-Mm-IMR90-Nov23 Zhang Lab 80+7+80 2,572,362,000
101209 HL085 S7 NP-Mm-IMR90-Nov23 Zhang Lab 80+7+80 2,587,222,000
101209 HL085 S8 KZ-Lancelet_3_Lib-Sep10 Zhang Lab 80+7+80 2,103,198,000
101203 HL084 S1 AL-Exome-Olf_MSC-Nov30_Nextera Zhang Lab 80 2,832,310,000
101203 HL084 S2 AL-Exome-Olf_MSC-Nov30_Nextera Zhang Lab 80 2,848,472,000
101203 HL084 S3 AL-Exome-Olf_CD34+-Nov30_Nextera Zhang Lab 80 2,484,395,000
101203 HL084 S4 AL-Exome-Olf_CD34+-Nov30_Nextera Zhang Lab 80 2,506,430,000
101203 HL084 S5 AL-Exome-KiPS-Nov30_Nextera Zhang Lab 80 2,774,503,000
101203 HL084 S6 AL-Exome-KiPS-Nov30_Nextera Zhang Lab 80 2,827,796,000
101203 HL084 S7 AL-Exome-KiPS_CD34+-Nov30_Nextera Zhang Lab 80 2,686,185,000
101203 HL084 S8 AL-Exome-KiPS_CD34+-Nov30_Nextera Zhang Lab 80 2,625,599,000
101123 HL083 S1 AL-Exome-FiPS_4F5_P15-Nov22 Zhang Lab 80+7+80 2,866,535,000
101123 HL083 S2 AL-Exome-FiPS_4F5_P44-Nov22 Zhang Lab 80+7+80 2,786,330,000
101123 HL083 S3 AL-Exome-Plvthm_Rb4_D_P10-Nov12 Zhang Lab 80+7+80 2,663,488,000
101123 HL083 S4 HC-MDA-Ecoli-SAGs(Ind1to8)-Nov15 Zhang Lab 80+7+80 2,809,612,000
101123 HL083 S5 AL-Exome-HFF_P5-Nov22 Zhang Lab 80+7+80 3,075,773,000
101123 HL083 S6 AL-Exome-38H1C_6_P10-Nov22 Zhang Lab 80+7+80 2,680,754,000
101123 HL083 S7 NP-SAG-MouseGutSetb-Nov4 Zhang Lab 80+7+80 3,067,120,000
101123 HL083 S8 UCSD-BB-TM_Solexa1-Oct28 Zhang Lab 80+7+80 1,836,366,000
101117 HL082 S1 AL-Exome-FiPS_4F2_P9-Nov12 Zhang Lab 80 2,320,956,000
101117 HL082 S2 AL-Exome-FiPS_4F2_P9-Nov12 Zhang Lab 80 2,404,301,000
101117 HL082 S3 AL-Exome-FiPS_4F2_P40-Nov12 Zhang Lab 80 2,422,202,000
101117 HL082 S4 AL-Exome-FiPS_4F2_P40-Nov12 Zhang Lab 80 2,425,803,000
101117 HL082 S5 AL-Exome-Plvthm_Rb4_5_P10-Nov12 Zhang Lab 80 2,451,276,000
101117 HL082 S6 AL-Exome-Plvthm_Rb4_5_P10-Nov12 Zhang Lab 80 2,459,732,000
101117 HL082 S7 AL-Exome-IMR90_P4-Nov12 Zhang Lab 80 2,549,279,000
101117 HL082 S8 AL-Exome-IMR90_P4-Nov12 Zhang Lab 80 2,470,636,000
101108 HL081 S1 KZ-Lancelet_3_Lib-Sep10 Zhang Lab 80+7+80 2,345,534,000
101108 HL081 S2 KZ-Lancelet_3_Lib-Sep10 Zhang Lab 80+7+80 2,413,314,000
101108 HL081 S3 KZ-Lancelet_3_Lib-Sep10 Zhang Lab 80+7+80 2,407,128,000
101108 HL081 S4 KZ-Lancelet_3_Lib-Sep10 Zhang Lab 80+7+80 2,413,251,000
101108 HL081 S5 KZ-Lancelet_3_Lib-Sep10 Zhang Lab 80+7+80 2,409,447,000
101108 HL081 S6 NP-SAG-MouseGutSetA.Ind1-12-Oct28 Zhang Lab 80+7+80 3,044,539,000
101108 HL081 S7 NP-SAG-MouseGutSetA.Ind1-12-Oct28 Zhang Lab 80+7+80 3,008,164,000
101108 HL081 S8 NP-SAG-MouseGutSetA.Ind1-12-Oct28 Zhang Lab 80+7+80 2,928,597,000
101030 HL080 S1 DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23 Zhang Lab 80+7+80 1,295,516,000
101030 HL080 S2 NP-SAG-MouseGutSetA.Ind1-12-Oct28 Zhang Lab 80+7+80 1,677,814,000
101030 HL080 S3 UCSD-BB-TM_Solexa1-Oct28 Zhang Lab 80+7+80 1,168,578,000
101030 HL080 S4 KZ-Lancelet_6_Lib-Se10 Zhang Lab 80+7+80 143,044,000
101030 HL080 S5 KZ-Lancelet_6_Lib-Se10 Zhang Lab 80+7+80 142,647,000
101030 HL080 S6 KZ-Lancelet_6_Lib-Se10 Zhang Lab 80+7+80 152,233,000
101030 HL080 S7 KZ-Lancelet_6_Lib-Se10 Zhang Lab 80+7+80 148,587,000
101030 HL080 S8 KZ-Lancelet_3_Lib-Sep10 Zhang Lab 80+7+80 1,934,932,000
101026 HL079 S1 AL-Exome-MMTA-Jun29-Belmonte1 Zhang Lab 80+7 1,377,624,000
101026 HL079 S2 AL-Exome-MMTA-Jun29-Belmonte1 Zhang Lab 80+7 1,217,203,000
101026 HL079 S3 JG-PGP1-Chr-Lib-Oct22 Zhang Lab 80+7 474,667,000
101026 HL079 S4 DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23 Zhang Lab 80+7 1,428,659,000
101026 HL079 S5 DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23 Zhang Lab 80+7 1,191,736,000
101026 HL079 S6 DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23 Zhang Lab 80+7 1,956,053,000
101026 HL079 S7 DD-BSPP-DMR220K_N2_VarInd1_10-Sep23+10% PhiX Zhang Lab 80+7 1,978,414,000
101026 HL079 S8 DD-BSPP-DMR220K_N2_VarInd1_10-Sep23+10% PhiX Zhang Lab 80+7 1,924,357,000
101021 HL078 S1 AL-Exome-hNSC-Aug14-Belmonte Zhang Lab 80+7
101021 HL078 S2 AL-Exome-hNSC-Aug14-Belmonte Zhang Lab 80+7
101021 HL078 S3 AL-Exome-NiPS2F-Aug14-Belmonte Zhang Lab 80+7
101021 HL078 S4 AL-Exome-NiPS2F-Aug14-Belmonte Zhang Lab 80+7
101021 HL078 S5 DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23 Zhang Lab 80+7
101021 HL078 S6 DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23 Zhang Lab 80+7
101021 HL078 S7 DD-BSPP-DMR220K_N2_VarInd1_10-Sep23+10% PhiX Zhang Lab 80+7
101021 HL078 S8 DD-BSPP-DMR220K_N2_VarInd1_10-Sep23+10% PhiX Zhang Lab 80+7
101016 HL077 S1 AL-Exome-AST-Oct4 Zhang Lab 80+7 1,913,314,000
101016 HL077 S2 AL-Exome-AST-Oct4 Zhang Lab 80+7 1,977,248,000
101016 HL077 S3 AL-Exome-ASTiPS4F_4-Oct4 Zhang Lab 80+7 2,205,330,000
101016 HL077 S4 AL-Exome-ASTiPS4F_4-Oct4 Zhang Lab 80+7 2,146,837,000
101016 HL077 S5 AL-Exome-ASTiPS4F_5-Oct4 Zhang Lab 80+7 2,449,641,000
101016 HL077 S6 AL-Exome-ASTiPS4F_5-Oct4 Zhang Lab 80+7 2,504,974,000
101016 HL077 S7 AL-Exome-HUViPS4F1-Aug14-Belmonte Zhang Lab 80+7 1,664,126,000
101016 HL077 S8 DD-DMR220K-BJiPS_Rebalanced-Sep23 Zhang Lab 80+7 1,909,981,000
101012 AL009 S1 AG-Exome-OAT_F-Oct12 Zhang Lab 80 2,119,404,000
101012 AL009 S2 AG-Exome-OAT_12-Oct12 Zhang Lab 80 2,093,540,000
101012 AL009 S3 AG-Exome-OAT_12.4-Oct12 Zhang Lab 80 1,901,899,000
101012 AL009 S4 AG-Exome-OAT_12.4.2-Oct12 Zhang Lab 80 1,948,886,000
101012 AL009 S5 AG-Exome-B4-Oct12 Zhang Lab 80 1,846,700,000
101012 AL009 S6 AG-Exome-1034I-Oct12 Zhang Lab 80 1,964,239,000
101012 AL009 S7 AG-Exome-1000F-Oct12 Zhang Lab 80 1,940,870,000
101012 AL009 S8 AG-Exome-1000I-Oct12 Zhang Lab 80 2,028,039,000
101008 DD003 S1 AG-Exome-OAT_F-Oct12 Zhang Lab 80 1,219,289,000
101008 DD003 S2 AG-Exome-OAT_12-Oct12 Zhang Lab 80 1,620,779,000
101008 DD003 S3 AG-Exome-OAT_12.4-Oct12 Zhang Lab 80 1,526,898,000
101008 DD003 S4 AG-Exome-OAT_12.4.2-Oct12 Zhang Lab 80 1,713,981,000
101008 DD003 S5 AG-Exome-B4-Oct12 Zhang Lab 80 1,546,025,000
101008 DD003 S6 AG-Exome-1034I-Oct12 Zhang Lab 80 1,546,654,000
101008 DD003 S7 AG-Exome-1000F-Oct12 Zhang Lab 80 1,634,594,000
101008 DD003 S8 AG-Exome-1000I-Oct12 Zhang Lab 80 2,013,521,000
101006 HL075 S1 HMS-C2U-12Plex-Sep29 Zhang Lab 36+6 849,634,000
101006 HL075 S2 HMS-C2U-12Plex-Sep29 Zhang Lab 36+6 877,326,000
101006 HL075 S3 HMS-C2U-12Plex-Sep29 Zhang Lab 36+6 881,302,000
101006 HL075 S4 HMS-C2U-12Plex-Sep29 Zhang Lab 36+6 866,372,000
101006 HL075 S5 HMS-C2U-12Plex-Sep29 Zhang Lab 36+6 845,377,000
101006 HL075 S6 HMS-C2U-12Plex-Sep29 Zhang Lab 36+6 825,983,000
101006 HL075 S7 HMS-C2U-12Plex-Sep29 Zhang Lab 36+6 865,950,000
101006 HL076 S8 HMS-C2U-12Plex-Sep29 Zhang Lab 36+6 849,742,000
100925 HL075 S1 KZ-Lancelet_3_Lib-Sep10 Zhang Lab 80+80+7 1,391,455,000
100925 HL075 S2 KZ-Lancelet_3_Lib-Sep10 Zhang Lab 80+80+7 1,483,815,000
100925 HL075 S3 KZ-Lancelet_3_Lib-Sep10 Zhang Lab 80+80+7 1,433,906,000
100925 HL075 S4 KZ-Lancelet_3_Lib-Sep10 Zhang Lab 80+80+7 1,163,263,000
100925 HL075 S5 KZ-Lancelet_6_Lib-Se10 Zhang Lab 80+80+7 1,951,079,000
100925 HL075 S6 KZ-Lancelet_6_Lib-Se10 Zhang Lab 80+80+7 2,373,404,000
100925 HL075 S7 DD-BSPP-DMR220K_N2_VarInd1_10-Sep23+10% PhiX Zhang Lab 80+80+7 2,057,108,000
100925 HL075 S8 DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23 Zhang Lab 80+80+7 2,212,734,000
100921 HL074 S1 AL-Exome-iPS16-1-Sep17 Zhang Lab 80 1,472,681,000
100921 HL074 S2 Al-Exome-iPS16-4-Sep17 Zhang Lab 80 1,495,036,000
100921 HL074 S3 AL-Exome-PGP1.2_iPS#2_P38-Sep17 Zhang Lab 80 1,867,962,000
100921 HL074 S4 AL-Exome-dH1_cf16-Sep17 Zhang Lab 80 1,456,431,000
100921 HL074 S5 AL-Exome-NiPS2F-Aug14-Belmonte Zhang Lab 80 1,062,524,000
100921 HL074 S6 AL-Exome-HUViPS4F3-Aug14-Belmonte Zhang Lab 80 1,174,766,000
100921 HL074 S7 AL-Exome-HUViPS4F1-Aug14-Belmonte Zhang Lab 80 609,446,000
100921 HL074 S8 AL-Exome-Huvec-Aug14-Belmonte Zhang Lab 80 1,276,503,000
100917 HL073 S1 AL-Exome-iPS16-1-Sep17 Zhang Lab 80 742,023,000
100917 HL073 S2 AL-Exome-iPS16-1-Sep17 Zhang Lab 80 789,931,000
100917 HL073 S3 Al-Exome-iPS16-4-Sep17 Zhang Lab 80 850,349,000
100917 HL073 S4 Al-Exome-iPS16-4-Sep17 Zhang Lab 80 855,557,000
100917 HL073 S5 AL-Exome-PGP1.2_iPS#2_P38-Sep17 Zhang Lab 80 831,524,000
100917 HL073 S6 AL-Exome-PGP1.2_iPS#2_P38-Sep17 Zhang Lab 80 726,195,000
100917 HL073 S7 AL-Exome-dH1_cf16-Sep17 Zhang Lab 80 707,288,000
100917 HL073 S8 AL-Exome-dH1_cf16-Sep17 Zhang Lab 80 755,538,000
100813 HL072 S1 KZ-GM20431 HSCHR LIB-Sep10 Zhang Lab 60+7 651,630,000
100813 HL072 S2 KZ-GM20431 HSCHR LIB-Sep10 Zhang Lab 60+7 694,169,000
100813 HL072 S3 KZ-Lancelet_3_Lib-Sep10 Zhang Lab 60+7 658,430,000
100813 HL072 S4 KZ-Lancelet_3_Lib-Sep10 Zhang Lab 60+7 646,324,000
100813 HL072 S5 KZ-Lancelet_6_Lib-Se10 Zhang Lab 60+7 700,011,000
100813 HL072 S6 KZ-Lancelet_6_Lib-Se10 Zhang Lab 60+7 709,104,000
100813 HL072 S7 KZ-Lancelet_8_Lib-Sep10 Zhang Lab 60+7 0
100813 HL072 S8 KZ-Lancelet_8_Lib-Sep10 Zhang Lab 60+7 0
100824 HL071 S1 HMS-GC-Exome-Exome_pair_3_C-Aug13 Zhang Lab 60+7 1,239,473,000
100824 HL071 S2 AL-Exome-HUViPS4F3-Aug14-Belmonte Zhang Lab 60+7 1,479,578,000
100824 HL071 S3 AL-Exome-Huvec-Aug14-Belmonte Zhang Lab 60+7 1,420,862,000
100824 HL071 S4 AL-Exome-FiPS4F7-Aug14-Belmonte Zhang Lab 60+7 1,272,738,000
100824 HL071 S5 HL-ASE-gDNA-Aug16 Zhang Lab 60+7 1,358,927,000
100824 HL071 S6 HL-ASE-gDNA-Aug16 Zhang Lab 60+7 1,063,216,000
100824 HL071 S7 HL-ASE-cDNA-Aug16 Zhang Lab 60+7 1,449,370,000
100824 HL071 S8 HL-ASE-cDNA-Aug16 Zhang Lab 60+7 1,422,238,000
100818 HL070 S1 AL-Exome-NiPS2F-Aug14-Belmonte Zhang Lab 80 1,725,932,000
100818 HL070 S2 AL-Exome-HUViPS4F3-Aug14-Belmonte Zhang Lab 80 1,429,202,000
100818 HL070 S3 AL-Exome-HUViPS4F1-Aug14-Belmonte Zhang Lab 80 1,511,891,000
100818 HL070 S4 AL-Exome-Huvec-Aug14-Belmonte Zhang Lab 80 1,361,743,000
100818 HL070 S5 AL-Exome-hNSC-Aug14-Belmonte Zhang Lab 80 1,419,623,000
100818 HL070 S6 AL-Exome-FiPS4F7-Aug14-Belmonte Zhang Lab 80 1,257,985,000
100818 HL070 S7 HMS-GC-Exome-Exome_pair_6_A-Aug13 Zhang Lab 80 1,072,036,000
100818 HL070 S8 HMS-GC-Exome-Exome_pair_6_C-Aug13 Zhang Lab 80 1,019,104,000
100814 HL069 S1 HMS-GC-Exome-Exome_pair_1_A-Aug13 Zhang Lab 60 1,218,075,000
100814 HL069 S2 HMS-GC-Exome-Exome_pair_1_C-Aug13 Zhang Lab 60 1,269,759,000
100814 HL069 S3 HMS-GC-Exome-Exome_pair_2_A-Aug13 Zhang Lab 60 1,347,416,000
100814 HL069 S4 HMS-GC-Exome-Exome_pair_2_C-Aug13 Zhang Lab 60 1,282,516,000
100814 HL069 S5 HMS-GC-Exome-Exome_pair_3_A-Aug13 Zhang Lab 60 1,116,590,000
100814 HL069 S6 HMS-GC-Exome-Exome_N6_FL-Aug13 Zhang Lab 60 1,232,492,000
100814 HL069 S7 HMS-GC-Exome-Exome_N6_Cer-Aug13 Zhang Lab 60 1,411,421,000
100814 HL069 S8 KZ-B.Jap-1_300bp_Lib-Aug5 Zhang Lab 60 0
100807 HL068 S1 AL-Genome-CVF-Jul30 Zhang Lab 60+7 1,212,756,000
100807 HL068 S2 AL-Genome-PGP1ips-Jul30 Zhang Lab 60+7 1,755,545,000
100807 HL068 S3 AL-Genome-CVIB-Jul30 Zhang Lab 60+7 1,301,693,000
100807 HL068 S4 DD-BSPP-CpG97K-13066B09-B28 Zhang Lab 60+7 1,185,514,000
100807 HL068 S5 KZ-ASE-DNA-Jul22 Zhang Lab 60+7 875,399,000
100807 HL068 S6 KZ-ASE-DNA-Jul22 Zhang Lab 60+7 824,990,000
100807 HL068 S7 HL-ASE-cDNA-Jul26 Zhang Lab 60+7 1,260,545,000
100807 HL068 S8 HL-ASE-cDNA-Jul26 Zhang Lab 60+7 1,340,234,000
100802 HL067 S1 KZ-ASE-DNA-Jul22 Zhang Lab 40 0
100802 HL067 S2 HL-ASE-cDNA-Jul26 Zhang Lab 40 0
100802 HL067 S3 HC-MDA-Ecoli_90m_C-Jul30 Zhang Lab 40 920,399,000
100802 HL067 S4 HC-MDA-Ecoli_10hr_C-Jul30 Zhang Lab 40 912,392,000
100802 HL067 S5 AL-Exome-CV13-Jul25 Zhang Lab 40 1,183,539,000
100802 HL067 S6 AL-Genome-PGP1F-Jul30 Zhang Lab 40 1,038,403,000
AL-Genome-17L_ANK-Jul30
100802 HL067 S7 AL-Genome-17L_HK1-Jul30 Zhang Lab 40 699,527,000
AL-Genome-17L_SLN-Jul30
PhiX
100802 HL067 S8 AL-Genome-PGP1F-Jul30 Zhang Lab 40 1,062,689,000
100726 HL066 S1 AL-Exome-CV11-Jul25 Zhang Lab 80 1,809,265,000
100726 HL066 S2 AL-Exome-CV11-Jul25 Zhang Lab 80 1,932,617,000
100726 HL066 S3 Al-Exome-CV12-Jul25 Zhang Lab 80 1,867,404,000
100726 HL066 S4 Al-Exome-CV12-Jul25 Zhang Lab 80 987,605,000
100726 HL066 S5 AL-Exome-CV13-Jul25 Zhang Lab 80 303,021,000
100726 HL066 S6 AL-Exome-CV13-Jul25 Zhang Lab 80 604,097,000
100726 HL066 S7 AL-Exome-56JW-Jul25-Vanderbilt Zhang Lab 80 616,688,000
100726 HL066 S8 AL-Exome-56JW-Jul25-Vanderbilt Zhang Lab 80 1,754,710,000
100721 HL065 S1 AL-Exome-CF_1.4-Jul10-Daley5 Zhang Lab 80 1,456,489,000
100721 HL065 S2 DD-BSPP-CpG97K-05215B09-Mar18-B10 Zhang Lab 80 1,493,011,000
100721 HL065 S3 AL-Exome-FiPS_3F1-Jul20 Zhang Lab 80 1,695,531,000
100721 HL065 S4 AL-Exome-FiPS_3F1-Jul20 Zhang Lab 80 1,701,866,000
100721 HL065 S5 AL-Exome-HFFXF-Jul20 Zhang Lab 80 1,729,276,000
100721 HL065 S6 AL-Exome-HFFXF-Jul20 Zhang Lab 80 1,602,218,000
100721 HL065 S7 AL-Exome-KiPS_4F8-Jul20 Zhang Lab 80 1,592,717,000
100721 HL065 S8 AL-Exome-KiPS_4F8-Jul20 Zhang Lab 80 1,688,181,000
100717 HL064 S1 KZ-BSPP_DMR220K-BJiPS-Jul10 Zhang Lab 80 1,542,764,000
100717 HL064 S2 AL-Exome-dHiF-Jun25-Daley1 Zhang Lab 80 1,488,881,000
100717 HL064 S3 DD-BSPP-PGP1iPS_Jun22-CPG97K+30K Zhang Lab 80 1,462,284,000
100717 HL064 S4 DD-BSPP_CPG97K-PGP1Fib-Jul16 Zhang Lab 80 1,189,205,000
100717 HL064 S5 DD-BSPP_CPG97K-01192B09-Jul14-B1 Zhang Lab 80 1,361,170,000
100717 HL064 S6 DD-BSPP_CPG97K-01373A17-Jul14-B3 Zhang Lab 80 1,420,433,000
100717 HL064 S7 DD-BSPP_CPG97K-01373B09-Jul14-B4 Zhang Lab 80 1,352,159,000
100717 HL064 S8 DD-BSPP_CPG97K-07292B9-Jul16-BC14 Zhang Lab 80 1,489,737,000
100713 HL063 S1 AL-Exome-CF_Fib-Jul10-Daley4 Zhang Lab 80 1,588,122,000
100713 HL063 S2 AL-Exome-CF_Fib-Jul10-Daley4 Zhang Lab 80 1,616,900,000
100713 HL063 S3 AL-Exome-CF_1.4-Jul10-Daley5 Zhang Lab 80 1,644,859,000
100713 HL063 S4 AL-Exome-CF_1.4-Jul10-Daley5 Zhang Lab 80 1,632,408,000
100713 HL063 S5 AL-Exome-CF_1.9-Jul10-Daley6 Zhang Lab 80 1,569,908,000
100713 HL063 S6 AL-Exome-CF_1.9-Jul10-Daley6 Zhang Lab 80 1,573,677,000
100713 HL063 S7 AL-Exome-H1_P39-Jul10-Daley7 Zhang Lab 80 1,582,703,000
100713 HL063 S8 AL-Exome-H1_P39-Jul10-Daley7 Zhang Lab 80 1,559,342,000
AL-DigiQ-PGP1F_L-Jun14
100707 HL062 S1 AL-DigiQ-CVF_L-Jun14 Zhang Lab 40 495,632,000
PhiX
AL-DigiQ-PGP1ips-Jun14
100707 HL062 S2 AL-DigiQ-CViB-Jun14 Zhang Lab 40 557,121,000
PhiX
AL-DigiQ-PGP1F-Jun14 Zhang Lab
100707 HL062 S3 AL-DigiQ-CVF-Jun14 Zhang Lab 40 513,397,000
PhiX Zhang Lab
100707 HL062 S4 AL-DigiQ-Clean-Jul6-PhiX-11_17_29 Zhang Lab 40 719,292,000
100707 HL062 S5 AL-DigiQ-Fib-Jul6-PhiX-11_17_29 Zhang Lab 40 718,808,000
100707 HL062 S6 AL-DigiQ-Mutation-Jul6-PhiX-11_17_29 Zhang Lab 40 740,698,000
100707 HL062 S7 JG-Microbiome-Ecoli1-July2 Zhang Lab 40 821,436,000
100707 HL062 S8 PhiX Zhang Lab 40 604,827,000
100703 HL061_3 S1 AL-Exome-DF19.11b-Jul22-Thompson1 Zhang Lab 80 1,574,935
100703 HL061_3 S2 AL-Exome-DF19.11b-Jul22-Thompson1 Zhang Lab 80 1,638,913
100703 HL061_3 S3 AL-Exome-ips4.7-Jul22-Thompson2 Zhang Lab 80 1,576,439
100703 HL061_3 S4 AL-Exome-ips4.7-Jul22-Thompson2 Zhang Lab 80 1,556,867
100703 HL061_3 S5 Al-Exome-ips_dHiF8-Jun25-Daley2 Zhang Lab 80 1,944,840
100703 HL061_3 S6 AL-Exome-ips_dHiF9-Jun25-Daley3 Zhang Lab 80 1,990,985
100703 HL061_3 S7 DD-BSPP-HGPS72iPS_Jul2-CPG97K+30K Zhang Lab 80 776,501
100703 HL061_3 S8 DD-BSPP-BJiPS_Jul2-CPG97K+30K Zhang Lab 80 795,092
100701 HL061_2 S1 AL-Exome-DF19.11b-Jun22-Thompson1 Zhang Lab Failed
100701 HL061_2 S2 AL-Exome-DF19.11b-Jun22-Thompson1 Zhang Lab Failed
100701 HL061_2 S3 AL-Exome-ips4.7-Jun22-Thompson2 Zhang Lab Failed
100701 HL061_2 S4 AL-Exome-ips4.7-Jun22-Thompson2 Zhang Lab Failed
100701 HL061_2 S5 Al-Exome-ips_dHiF8-Jun25-Daley2 Zhang Lab Failed
100701 HL061_2 S6 AL-Exome-ips_dHiF9-Jun25-Daley3 Zhang Lab Failed
100701 HL061_2 S7 DD-BSPP-HGPS72iPS_Jun22-CPG97K+30K Zhang Lab Failed
100701 HL061_2 S8 DD-BSPP-BJiPS_Jun22-CPG97K+30K Zhang Lab Failed

Jan-Jun

Date Run Lane Tube Label Seq facility Read length # filtered reads (bps)
100630 HL061 S1 AL-Exome-DF19.11b-Jun22-Thompson1 Zhang Lab Failed
100630 HL061 S2 AL-Exome-DF19.11b-Jun22-Thompson1 Zhang Lab Failed
100630 HL061 S3 AL-Exome-ips4.7-Jun22-Thompson2 Zhang Lab Failed
100630 HL061 S4 AL-Exome-ips4.7-Jun22-Thompson2 Zhang Lab Failed
100630 HL061 S5 Al-Exome-ips_dHiF8-Jun25-Daley2 Zhang Lab Failed
100630 HL061 S6 AL-Exome-ips_dHiF9-Jun25-Daley3 Zhang Lab Failed
100630 HL061 S7 DD-BSPP-HGPS72iPS_Jun22-CPG97K+30K Zhang Lab Failed
100630 HL061 S8 DD-BSPP-BJiPS_Jun22-CPG97K+30K Zhang Lab Failed
100627 HL060 S1 AL-Exome-dHiF-Jun25-Daley1 Zhang Lab 80 N/A
100627 HL060 S2 AL-Exome-dHiF-Jun25-Daley1 Zhang Lab 80 N/A
100627 HL060 S3 AL-Exome-DF19.11b-Jun22-Thompson1 Zhang Lab 80 N/A
100627 HL060 S4 Al-Exome-ips_dHiF8-Jun25-Daley2 Zhang Lab 80 N/A
100627 HL060 S5 Al-Exome-ips_dHiF8-Jun25-Daley2 Zhang Lab 80 N/A
100627 HL060 S6 AL-Exome-ips_dHiF9-Jun25-Daley3 Zhang Lab 80 N/A
100627 HL060 S7 AL-Exome-ips_dHiF9-Jun25-Daley3 Zhang Lab 80 N/A
100627 HL060 S8 PhiX Control Zhang Lab 80 N/A
100623 HL059 S1 AL-Exome-DF19.11b-Jun22-Thompson1 Zhang Lab N/A Low Cluster Density
100623 HL059 S2 AL-Exome-DF19.11b-Jun22-Thompson1 Zhang Lab N/A Low Cluster Density
100623 HL059 S3 AL-Exome-ips4.7-Jun22-Thompson2 Zhang Lab N/A Low Cluster Density
100623 HL059 S4 AL-Exome-ips4.7-Jun22-Thompson2 Zhang Lab N/A Low Cluster Density
100623 HL059 S5 DD-BSPP-HGPS72iPS_Jun22-CPG97K+30K Zhang Lab N/A Low Cluster Density
100623 HL059 S6 DD-BSPP-BJiPS_Jun22-CPG97K+30K Zhang Lab N/A Low Cluster Density
100623 HL059 S7 DD-BSPP-PGP1iPS_Jun22-CPG97K+30K Zhang Lab N/A Low Cluster Density
100623 HL059 S8 KZ-?-BJ_iPSDMR220K-Jun8 Zhang Lab N/A Low Cluster Density
100615 HL058_2 S1 AL-Exome-ips 11b-Eggan-Mar9 Zhang Lab 60
100615 HL058_2 AL-DigiQ-PGP1F_L-Jun14
100615 HL058_2 S2 AL-DigiQ-CVF_L-Jun14 Zhang Lab 60 Low Cluster Density
100615 HL058_2 PhiX
100615 HL058_2 S3 AL-exome-hFib 17-Eggan-Mar9 Zhang Lab 60
100615 HL058_2 AL-DigiQ-PGP1ips-Jun14
100615 HL058_2 S4 AL-DigiQ-CViB-Jun14 Zhang Lab 60 Low Cluster Density
100615 HL058_2 PhiX
100615 HL058_2 S5 AL-Exome-hFib29-Eggan-Mar9 Zhang Lab 60
100615 HL058_2 S6 AL-Exome-29A_Eggan-Mar17 Zhang Lab 60
100615 HL058_2 AL-DigiQ-PGP1F-Jun14
100615 HL058_2 S7 AL-DigiQ-CVF-Jun14 Zhang Lab 60 Low Cluster Density
100615 HL058_2 PhiX
100615 HL058_2 S8 AL-Exome-ips 29e-Eggan-Mar9 Zhang Lab 60
100612 HL058 S1 AL-Exome-ips 11b-Eggan-Mar9 Zhang Lab
AL-DigiQ-PGP1F_L-Jun11
100612 HL058 S2 AL-DigiQ-CVF_L-Jun11 Zhang Lab Low Cluster Density
PhiX
100612 HL058 S3 AL-exome-hFib 17-Eggan-Mar9 Zhang Lab
AL-DigiQ-PGP1ips-Jun11
100612 HL058 S4 AL-DigiQ-CViB-Jun11 Zhang Lab Low Cluster Density
PhiX
100612 HL058 S5 AL-Exome-hFib29-Eggan-Mar9 Zhang Lab
100612 HL058 S6 AL-Exome-29A_Eggan-Mar17 Zhang Lab
AL-DigiQ-PGP1F-Jun11
100612 HL058 S7 AL-DigiQ-CVF-Jun11 Zhang Lab Low Cluster Density
PhiX
100612 HL058 S8 AL-Exome-ips 29e-Eggan-Mar9 Zhang Lab
100606 VCU S1 AL-Exome-134GA-May3-Vanderbilt VCU 80
100606 VCU S2 AL-Exome-134GA-May3-Vanderbilt VCU 80
100606 VCU S3 AL-Exome-134LM-May3-Vanderbilt VCU 80
100606 VCU S4 AL-Exome-134LM-May3-Vanderbilt VCU 80
100606 VCU S5 Al-Exome-121DB-May3-Vanderbilt VCU 80
100606 VCU S6 Al-Exome-121DB-May3-Vanderbilt VCU 80
100606 VCU S7 AL-Exome-56JW-May3-Vanderbilt VCU 80
100606 VCU S8 AL-Exome-56JW-May3-Vanderbilt VCU 80
100605 HL057 S1 VCU-Gao-GY2-May25 Zhang Lab 60
100605 HL057 S2 VCU-Gao-GY3-May25 Zhang Lab 60
100605 HL057 S3 VCU-Gao-GY4-May25 Zhang Lab 60
100605 HL057 S4 VCU-Gao-GY5-May25 Zhang Lab 60
100605 HL057 S5 VCU-Gao-GY6-May25 Zhang Lab 60
100605 HL057 S6 VCU-Gao-GY7-May25 Zhang Lab 60
100605 HL057 S7 VCU-Gao-GY8-May25 Zhang Lab 60
100605 HL057 S8 PhiX Zhang Lab 60
100601 HL056 S1 Al-Exome-121BP-May3-Vanderbilt Zhang Lab 80 2,295,676,000
100601 HL056 S2 Al-Exome-139TS-May3-Vanderbilt Zhang Lab 80 2,389,689,000
100601 HL056 S3 AL-Exome-56JW-May3-Vanderbilt Zhang Lab 80 2,003,056,000
100601 HL056 S4 Al-Exome-121DB-May3-Vanderbilt Zhang Lab 80 2,294,729,000
100601 HL056 S5 Al-Exome-56WW-May3-Vanderbilt Zhang Lab 80 2,028,859,000
100601 HL056 S6 AL-Exome-139TD-May3-Vanderbilt Zhang Lab 80 1,991,602,000
100601 HL056 S7 AL-Exome-125GA-May3-Vanderbilt Zhang Lab 80 2,138,804,000
100601 HL056 S8 Al-Exome-125DC-May3-Vanderbilt Zhang Lab 80 2,014,180,000
100523 HL055 S1 Al-Exome-121BP-May3-Vanderbilt Zhang Lab 80X2 2,064,140,000
100523 HL055 S2 Al-Exome-139TS-May3-Vanderbilt Zhang Lab 80X2 2,146,818,000
100523 HL055 S3 AL-Exome-56JW-May3-Vanderbilt Zhang Lab 80X2 1,757,982,000
100523 HL055 S4 Al-Exome-121DB-May3-Vanderbilt Zhang Lab 80X2 2,009,833,000
100523 HL055 S5 Al-Exome-56WW-May3-Vanderbilt Zhang Lab 80X2 1,965,460,000
100523 HL055 S6 AL-Exome-139TD-May3-Vanderbilt Zhang Lab 80X2 1,957,803,000
100523 HL055 S7 AL-Exome-125GA-May3-Vanderbilt Zhang Lab 80X2 1,977,461,000
100523 HL055 S8 Al-Exome-125DC-May3-Vanderbilt Zhang Lab 80X2 1,896,028,000
100514 HL054 S1 Al-Exome-121BP-May3-Vanderbilt Zhang Lab 80X2 2,055,502,000
100514 HL054 S2 Al-Exome-139TS-May3-Vanderbilt Zhang Lab 80X2 2,109,831,000
100514 HL054 S3 AL-Exome-134GA-May3-Vanderbilt Zhang Lab 80X2 2,115,594,000
100514 HL054 S4 AL-Exome-134LM-May3-Vanderbilt Zhang Lab 80X2 2,145,899,000
100514 HL054 S5 Al-Exome-56WW-May3-Vanderbilt Zhang Lab 80X2 2,071,626,000
100514 HL054 S6 AL-Exome-139TD-May3-Vanderbilt Zhang Lab 80X2 1,959,635,000
100514 HL054 S7 AL-Exome-125GA-May3-Vanderbilt Zhang Lab 80X2 1,985,925,000
100514 HL054 S8 Al-Exome-125DC-May3-Vanderbilt Zhang Lab 80X2 1,973,832,000
100503 HL053 S1 AL-Exome-CViB-Apr23 Zhang Lab 80X2 1,948,897,000
100503 HL053 S2 AL-Exome-CViF-Apr25 Zhang Lab 80X2 2,076,896,000
100503 HL053 S3 AL-Exome-DF-Apr23 Zhang Lab 80X2 2,335,032,000
100503 HL053 S4 AL-Exome-FS-Apr23 Zhang Lab 80X2 2,433,140,000
100503 HL053 S5 AL-Exome-hFib11-apr23 Zhang Lab 80X2 2,083,124,000
100503 HL053 S6 HC-MDA_Mouse_2h_c4-Mar02 Zhang Lab 80X2 1,223,678,000
100503 HL053 S7 AL-Exome-ips17a-Apr23 Zhang Lab 80X2 1,453,812,000
100503 HL053 S8 AL-Exome-ips17b-Apr23 Zhang Lab 80X2 1,949,271,000
100429 HL052 S1 PhiX Zhang Lab 18X2 64,904,000
100429 HL052 S2 PhiX Zhang Lab 18X2 81,369,000
100429 HL052 S3 PhiX Zhang Lab 18X2 79,289,000
100429 HL052 S4 PhiX Zhang Lab 18X2 76,562,000
100429 HL052 S5 PhiX Zhang Lab 18X2 72,647,000
100429 HL052 S6 PhiX Zhang Lab 18X2 73,558,000
100429 HL052 S7 PhiX Zhang Lab 18X2 72,909,000
100429 HL052 S8 PhiX Zhang Lab 18X2 71,652,000
100425 DD002 S1 AL-Exome-CV1-Apr22-Nimblegen Zhang Lab 80 1,985,894,000
100425 DD002 S2 JD-BSPP-Cmm09A-Oct4GFPiPs-Apr8-iPS Zhang Lab 80 1,395,971,000
100425 DD002 S3 JD-BSPP-Cmm09A-mousePGC-Apr8-PGC Zhang Lab 80 1,740,602,000
100425 DD002 S4 AL-Exome-CV1-Apr22-Nimbegen Zhang Lab 80 1,872,065,000
100425 DD002 S5 DD-BSPP-CpG97K-AG01972p18-Apr22-A1 Zhang Lab 80 1,314,109,000
100425 DD002 S6 DD-BSPP-CpG97K-AG114p8p13-Apr22-A2 Zhang Lab 80 1,226,682,000
100425 DD002 S7 DD-BSPP-CpG97K-H9-Apr22 Zhang Lab 80 1,113,533,000
100425 DD002 S8 DD-BSPP-CpG97K-BJp13-Apr22-BJ Zhang Lab 80 1,289,198,000
100420 HL051 S1 Zymo-M1-Apr16 Zhang Lab 40 457,916,000
100420 HL051 S2 Zymo-M2-Apr16 Zhang Lab 40 436,172,000
100420 HL051 S3 Zymo-M3-Apr16 Zhang Lab 40 354,544,000
100420 HL051 S4 Zymo-M4-Apr16 Zhang Lab 40 212,326,000
100420 HL051 S5 Zymo-H1-Apr16 Zhang Lab 40 558,978,000
100420 HL051 S6 Zymo-H2-Apr16 Zhang Lab 40 520,089,000
HC-MDA_E.Coli_10h_5-Apr19
100420 HL051 S7 HC-MDA_E.Coli_10h_6-Apr19 Zhang Lab 40 175,344,000
PhiX
100420 HL051 S8 HC-MDA_Mouse_2h_c4-Mar02 Zhang Lab 40 124,140,000
100415 HL050 S1 AL-Exome-ips 11a-Eggan-Mar9 Zhang Lab 80 1,228,095,000
100415 HL050 S2 AL-Exome-CV2- Apr12-Nimblegen Zhang Lab 80 1,949,162,000
100415 HL050 S3 AL-Exome-CV2- Apr12-Nimblegen Zhang Lab 80 1,783,540,000
100415 HL050 S4 AL-Exome-ips 11a-Eggan-Mar9 Zhang Lab 80 1,152,158,000
100415 HL050 S5 AL-Exome-CV3-Apr12-Nimblegen Zhang Lab 80 1,617,660,000
100415 HL050 S6 AL-Exome-CV3-Apr12-Nimblegen Zhang Lab 80 1,554,899,000
100415 HL050 S7 Al-Exome-CV4-Apr12-Nimblegen Zhang Lab 80 1,975,782,000
100415 HL050 S8 Al-Exome-CV4-Apr12-Nimblegen Zhang Lab 80 1,871,429,000
100411 HL049_2 S1 AL-exome-ips 11b-Eggan-Mar9 Zhang Lab 80 710,636,000
100411 HL049_2 S2 AL-Exome-PGP1F-Mar9-Agilent_Cell_Pellete Zhang Lab 80 1,873,431,000
100411 HL049_2 S3 AL-Exome-PGP1F-Mar9-Agilent_Cell_Pellete Zhang Lab 80 1,631,006,000
100411 HL049_2 S4 AL-exome-hFib 17-Eggan-Mar9 Zhang Lab 80 2,120,734,000
100411 HL049_2 S5 AL-Exome-ips 11a-Eggan-Mar9 Zhang Lab 80 608,718,000
100411 HL049_2 S6 AL-Exome-ips 11a-Eggan-Mar9 Zhang Lab 80 10,092,000
100411 HL049_2 S7 AL-Exome-ips 29e-Eggan-Mar9 Zhang Lab 80 509,138,000
100411 HL049_2 S8 AL-Exome-ips 29e-Eggan-Mar9 Zhang Lab 80 1,160,777,000
100407 DD001 S1 HMS-GC-Exome-PGP3 Zhang Lab 60 633,169,000
100407 DD001 S2 MCG-HS-EJ645-Feb26 Zhang Lab 60 1,214,095,000
100407 DD001 S3 MCG-HS-EJ656-Feb26 Zhang Lab 60 321,550,000
100407 DD001 S4 HMS-GC-Exome-PGP10 Zhang Lab 60 1,294,949,000
100407 DD001 S5 DD-BSPP-CpG97K-05215A18-Mar18-B9 Zhang Lab 60 956,968,000
100407 DD001 S6 DD-BSPP-CpG97K-05215B09-Mar18-B10 Zhang Lab 60 259,485,000
100407 DD001 S7 DD-BSPP-CpG97K-09351B09-Mar18-B22 Zhang Lab 60 856,623,000
100407 DD001 S8 DD-BSPP-CpG97K-13066B09-Mar18-B28 Zhang Lab 60 229,124,000
100401 HL048 S1 AL-Exome-PGP1_iPS_P16-Mar23-Nimblegen Zhang Lab 80 2,175,052,000
100401 HL048 S2 AL-Exome-PGP1_iPS_P16-Mar23-Nimblegen Zhang Lab 80 2,424,503,000
100401 HL048 S3 AL-Exome-PGP1F-Mar23-Nimblegen Zhang Lab 80 1,872,156,000
100401 HL048 S4 AL-Exome-PGP1F-Mar23-Nimblegen Zhang Lab 80 1,756,170,000
100401 HL048 S5 AL-Exome-hFib29-Eggan-Mar9 Zhang Lab 80 2,288,271,000
100401 HL048 S6 AL-Exome-hFib29-Eggan-Mar9 Zhang Lab 80 2,100,116,000
100401 HL048 S7 AL-Exome-29A_Eggan-Mar17 Zhang Lab 80 2,132,208,000
100401 HL048 S8 AL-Exome-29A_Eggan-Mar17 Zhang Lab 80 1,980,027,000
100326 HL047 S1 AL-Exome-CViB-Mar23-Nimblegen Zhang Lab 80 2,064,171,000
100326 HL047 S2 AL-Exome-CViB-Mar23-Nimblegen Zhang Lab 80 2,013,502,000
100326 HL047 S3 HMS-GC-Exome-PGP9-Feb24 Zhang Lab 80 2,298,166,000
100326 HL047 S4 HMS-GC-Exome-PGP2 Zhang Lab 80 2,627,795,000
100326 HL047 S5 HMS-GC-Exome-PGP3 Zhang Lab 80 716,842,000
100326 HL047 S6 HMS-GC-Exome-PGP3 Zhang Lab 80 722,736,000
100326 HL047 S7 AL-Exome-CVF-Mar23-Nimblegen Zhang Lab 80 2,368,574,000
100326 HL047 S8 AL-Exome-CVF-Mar23-Nimblegen Zhang Lab 80 2,290,573,000
100318 HL046_3 S1 AL-exome-hFib 17-Eggan-Mar9 Zhang Lab 80 272,118,000
100318 HL046_3 S2 AL-exome-hFib 11-Eggan-Mar9 Zhang Lab 80 3,874,000
100318 HL046_3 S3 AL-exome-ips 11b-Eggan-Mar9 Zhang Lab 80 62,172,000
100318 HL046_3 S4 AL-exome-ips 17a-Eggan-Mar9 Zhang Lab 80 1,530,000
100318 HL046_3 S5 AL-exome-ips 17b-Eggan-Mar9 Zhang Lab 80 1,418,802,000
100318 HL046_3 S6 AL-Exome-CViB-Feb21-Agilent Zhang Lab 80 19,536,000
100318 HL046_3 S7 AL-Exome-CViB-Feb21-Agilent Zhang Lab 80 70,512,000
100318 HL046_3 S8 MCG-HS-EJ657-Feb26 Zhang Lab 80 1,633,297,000
100312 HL045 S1 AL-exome-hFib 17-Eggan-Mar9 Zhang Lab 80 1,506,856,000
100312 HL045 S2 HMS-GC-Exome-PGP2 Zhang Lab 80 2,253,160,000
100312 HL045 S3 HMS-GC-Exome-PGP7-Feb24 Zhang Lab 80 2,238,526,000
100312 HL045 S4 HMS-GC-Exome-PGP9-Feb24 Zhang Lab 80 2,184,078,000
100312 HL045 S5 AL-exome-hFib 11-Eggan-Mar9 Zhang Lab 80 1,494,615,000
100312 HL045 S6 AL-exome-ips 11b-Eggan-Mar9 Zhang Lab 80 1,517,718,000
100312 HL045 S7 AL-exome-ips 17a-Eggan-Mar9 Zhang Lab 80 1,898,132,000
100312 HL045 S8 AL-exome-ips 17b-Eggan-Mar9 Zhang Lab 80 1,484,276,000
100309 HL044 S1 JD-CPG97K-BC_11306A18-Feb25-B25 Zhang Lab 60 1,195,725,000
100309 HL044 S2 JD-CPG97K-BC_11306B09-Feb25-B26 Zhang Lab 60 1,010,595,000
100309 HL044 S3 JD-CPG97K-BC_13066A17-Feb25-B27 Zhang Lab 60 1,282,911,000
100309 HL044 S4 AL-Genome-FS_gDNA-Feb8 Zhang Lab 60 299,586,000
100309 HL044 S5 JD-CPG97K+30K-BC_01373A17-Jan15-B3 Zhang Lab 60 572,821,000
100309 HL044 S6 AL-Exome-CViB-Feb21-Agilent Zhang Lab 60 43,405,000
100309 HL044 S7 AL-DigiQ-CVF_PhiX-Mar3-(Jan29) Zhang Lab 60 1,123,888,000
100309 HL044 S8 KZ-DigiQ-FS_6N_PhiX-Mar3-(Jan27) Zhang Lab 60 490,072,000
100305 HL043 S1 AL-Genome-FS_gDNA-Feb8 Zhang Lab 60 713,975,000
100305 HL043 S2 AL-Genome-FS_gDNA-Feb8 Zhang Lab 60 580,915,000
100305 HL043 S3 AL-DigiQ-CVF_Feb-Mar3 w/ PhiX Zhang Lab 60 1,226,356,000
100305 HL043 S4 JD-CPG97K-BC_09351A17-Feb25 -B21 Zhang Lab 60 1,070,585,000
100305 HL043 S5 JD-CPG97K-BC_09491A17-Feb25-B23 Zhang Lab 60 1,089,308,000
100305 HL043 S6 JD-CPG97K-BC_09491B09-Feb25-B24 Zhang Lab 60 1,072,970,000
100305 HL043 S7 AL-Genome-DF_gDNA-Feb8 Zhang Lab 60 1,636,622,000
100305 HL043 S8 AL-Genome-DF_gDNA-Feb8 Zhang Lab 60 1,558,396,000
AL-DigiQ-CViB/iF-Jan29
100302 HL042 S1 KZ-DigiQ-FS_300BP-Jan27 Zhang Lab 60 727,876,000
PhiX
100302 HL042 S2 MCG-HS-EJ644-Feb26 Zhang Lab 60 534,189,000
100302 HL042 S3 AL-Exome-CViB-Feb21-Agilent Zhang Lab 60 535,218,000
100302 HL042 S4 JD-cpg97k-Breastcancer_09092B09-Feb25-B16 Zhang Lab 60 688,224,000
100302 HL042 S5 JD-cpg97k-Breastcancer_09123A17-Feb25-B17 Zhang Lab 60 988,402,000
100302 HL042 S6 JD-cpg97k-Breastcancer_09123B09-Feb25-B18 Zhang Lab 60 1,305,870,000
100302 HL042 S7 JD-cpg97k-Breastcancer_09206B09-Feb25-B19 Zhang Lab 60 1,139,776,000
100302 HL042 S8 JD-cpg97k-Breastcancer_09265B09-Feb25-B20 Zhang Lab 60 1,194,327,000
100226 HL041 S1 JD-CPG97K-BreastCancer-05359A17_R-Feb17-B11R Zhang Lab 60 1,493,888,000
AL-DigiQ-CViB/iF-Jan29
100226 HL041 S2 KZ-DigiQ-FS_300BP-Jan27 Zhang Lab 60 403,356,000
PhiX
100226 HL041 S3 HMS-GC-Exome-PGP7-Feb24 Zhang Lab 60 1,646,149,000
100226 HL041 S4 HMS-GC-Exome-PGP9-Feb24 Zhang Lab 60 1,439,205,000
100226 HL041 S5 JD-CPG97K-BreastCancer-05359B09_R-Feb17-B12R Zhang Lab 60 1,453,021,000
100226 HL041 S6 JD-CPG97K-BreastCancer_07292A17_R-Feb17-B13R Zhang Lab 60 1,678,189,000
100226 HL041 S7 JD-CPG97K-BreastCancer_07292B09_R-Feb17-B14R Zhang Lab 60 1,463,761,000
AL-DigiQ-CVF-Jan29
100226 HL041 S8 KZ-DigiQ-FS_6N-Jan27 Zhang Lab 60 1,575,744,000
PhiX
100219 HL040 S1 UCSD-BO-YC_RNA-Feb17 Zhang Lab 60 1,357,018,000
AL-DigiQ-CViB/iF-Jan29
100219 HL040 S2 KZ-DigiQ-FS_300BP-Jan27 Zhang Lab 60 980,963,000
PhiX
100219 HL040 S3 JD-CPG97k+30k-Breast_cancer_01373A17-Jan15-B3 Zhang Lab 60 86,039,000
100219 HL040 S4 JD-CPG97k+30k-Breast_cancer_01373B09-Jan15-B4 Zhang Lab 60 870,182,000
100219 HL040 S5 JD-CPG97K-BreastCancer-09075B09-Feb17-15E Zhang Lab 60 757,280,000
100219 HL040 S6 JD-CPG97K-BreastCancer-09075B09-Feb17-15R Zhang Lab 60 1,046,148,000
100219 HL040 S7 AL-DigiQ-CVF-Feb17 w/ PhiX Zhang Lab 60 993,905,000
AL-DigiQ-CVF-Jan29
100219 HL040 S8 KZ-DigiQ-FS_6N-Jan27 Zhang Lab 60 0
PhiX
100212 HL039 S1 JD-CPGmm9A-CtmESC-Feb10 Zhang Lab 60 736,934,000
AL-DigiQ-CViB/iF-Jan29
100212 HL039 S2 KZ-DigiQ-FS_300BP-Jan27 Zhang Lab 60 0
PhiX
100212 HL039 S3 HMS-GC-exome-Nim-GT Zhang Lab 60 833,000
100212 HL039 S4 HMS-GC-Exome-PGP4 Zhang Lab 60 734,357,000
100212 HL039 S5 JD-CPG97K-Breastcancer_03170B09-Jan28-B7 Zhang Lab 60 1,238,744,000
100212 HL039 S6 JD-CPG97K-Breast_Cancer_03259B09-Jan28-B8 Zhang Lab 60 1,103,439,000
100212 HL039 S7 AL-Exome-CViB-AB_Jan28 Zhang Lab 60 0
100212 HL039 S8 JD-CPGmm9A-TETmESC-Feb10 Zhang Lab 60 1,348,896,000
Date Probe Set Tube Label Conc. X vol Seq facility Lib. Const. Read Length # filtered reads # mappable reads
Feb 7 HL038 Exome s1,AL-Exome-CViB-AB-Jan28 - Zhang Lab Alice 60bp 2,631,195
Feb 7 HL038 BSPP s2,JD-cpg97k-Breastcancer_sample_01373B09-Jan28 - Zhang Lab Jie 60bp 28,592,257 73%
Feb 7 HL038 BSPP s3,JD-cpg97k-Breastcancer_sample_01436B09_Jan28 - Zhang Lab Jie 60bp 28,611,301 72%
Feb 7 HL038 Exome s4,KZ-Exome-CViB-N2-Jan28 - Zhang Lab Kun 60bp 22,996,517
Feb 7 HL038 BSPP s5,JD-cpg97k-Harvard_sample_M0013.1-Jan28 - Zhang Lab Jie 60bp 27,703,912
Feb 7 HL038 BSPP s6,JD-cpg97k-Harvard_sample_M0077.3-Jan28 - Zhang Lab Jie 60bp 28,515,530
Feb 7 HL038 BSPP s7,JD-cpg97k-Harvard_sample_M0124.3-Jan28 - Zhang Lab Jie 60bp 27,796,744
Feb 7 HL038 BSPP s8,JD-cpg97k-Harvard_sample_M0188.3-Jan28 - Zhang Lab Jie 60bp 26,285,658
Feb 2 HL037 BSPP s1,JD-B3 - Zhang Lab Alice 60bp 329192
Feb 2 HL037 DigiQ s2,AL-DigiQ-CVF-Jan29/KZ-DigiQ-FS_6N-Jan27 - Zhang Lab Jie 60bp 396995
Feb 2 HL037 Exome s3,AL-Exome-DF-Jan26-Nimblegen - Zhang Lab Alice 60bp 24111229 86%
Feb 2 HL037 BSPP s4,KZ-BSPP-B2-N2-Jan28 - Zhang Lab Kun 60bp 24816617 22%/60%(hg18)
Feb 2 HL037 Exome s5,AL-Exome-CViB-AB-Jan28 - Zhang Lab Alice 60bp 2627559 86%
Feb 2 HL037 Exome s6,AL-Exome-CViB-CDE-Jan28 - Zhang Lab Alice 60bp 26225044 78%
Feb 2 HL037 DigiQ s7, AL-DigiQ-CViB-iF-Jan29/KZ-DigiQ-FS_300P-Jan27 - Zhang Lab Alice 60bp 461181
Feb 2 HL037 Exome s8,AL-Exome-FS-Jan26-Nimblegen - Zhang Lab Alice 60bp 20920646 90%
Jan 27 HL036 Exome s1,AL-Exome-DF-Jan26-Nimblegen - Zhang Lab Alice 60bp 29,983,562 86.81%
Jan 27 HL036 DigiQ s2,AL-DigiQ-CViB/iF-Jan26 - Zhang Lab Alice 60bp 884920
Jan 27 HL036 BSPP s3,JD-CPG97K-Harvard_Sample_B0134.1-Jan22 - Zhang Lab Jie 60bp 17,618,873 26%/68%(hg18)
Jan 27 HL036 Exome s4,AL-Exome-FS-Jan26-Nimblegen - Zhang Lab Alice 60bp 30,430,624 89.97%
Jan 27 HL036 BSPP s5,JD-CPG97K-Harvard_Sample_B0107.1-Jan22 - Zhang Lab Jie 60bp 13,332,549 34%/70%(hg18)
Jan 27 HL036 BSPP s6,JD-CPG97K-Harvard_Sample_B0108.1-Jan22 - Zhang Lab Jie 60bp 15,408,196 36%/72%(hg18)
Jan 27 HL036 DigiQ s7, AL-DigiQ-CVF-Jan26 - Zhang Lab Alice 60bp failed
Jan 27 HL036 BSPP s8,JD-CPG97k+30k-Breast_Cancer_01192B09-Jan15 - Zhang Lab Jie 60bp 17,643,295 14.5%/62%(hg18)
Jan 23 HL035 Exome s2,HMS-GC-Exome-PGP2 - Zhang Lab Alice 60bp 28,245,781
Jan 23 HL035 Exome s3,HMS-GC-Exome-PGP3 - Zhang Lab Alice 60bp 27,995,793
Jan 23 HL035 Exome s4,HMS-GC-Exome-PGP3 - Zhang Lab Alice 60bp 23,101,612
Jan 23 HL035 BSPP s5,JD-CPG97K-HarvardB0047.1-Jan22 - Zhang Lab Jie 60bp 10,279,091 17%
Jan 23 HL035 BSPP s6,JD-CPG97K+30K-HarvardB0060.1-Jan22 - Zhang Lab Jie 60bp 12,433,511 31%
Jan 23 HL035 BSPP s7,JD-CPG97K-HarvardB0070.1-Jan22 - Zhang Lab Jie 60bp 14,238,777 36%
Jan 23 HL035 Exome s8,AL-Exome-PGP7-Jan18 - Zhang Lab Alice 60bp 7,225,106
Jan 13 HL034 Exome s1,HMS-GC-Exome-PGP5-Oct09 - Zhang Lab Billy/Luhan 60bp 15,630,851
Jan 13 HL034 DigiQ s2,HMS-GC-Exome-PGP5-Oct09 - Zhang Lab Billy/Luhan 60bp 16,208,687
Jan 13 HL034 Exome s3,AL-Exome-CViB-Jan14-AB - Zhang Lab Alice 60bp 15,754,533
Jan 13 HL034 Ctrl s4,AL-Exome-CViB-Jan14-AB - Zhang Lab Alice 60bp 15,864,921
Jan 13 HL034 Exome s5,AL-Exome-CViB-Jan14-CDE - Zhang Lab Alice 60bp 15,761,086
Jan 13 HL034 Exome s6,AL-Exome-CViB-Jan14-CDE - Zhang Lab Alice 60bp 15,795,450
Jan 13 HL034 BSPP s7,JD-cpg97k+30k-BC-01230B09-Jan15 - Zhang Lab Jie 60bp 12,246,857 26%
Jan 13 HL034 Exome s8,HMS-GC-exome-Nim-GT - Zhang Lab Billy/Luhan 60bp 7,671,888
Jan 13 HL033 Exome s1,HMS-GC-exome-Nim-GT - Zhang Lab Billy/Luhan 60bp 9,619,807
Jan 13 HL033 DigiQ s2,KZ-DigiQ-DF-Jan11/AL-DigiQ-CVF-Jan12 - Zhang Lab Alice/Kun 60bp 5,020,038
Jan 13 HL033 BisExSeq s3,HL-BisExon-NA20431 - Zhang Lab Alan 60bp 11,363,087 75%
Jan 13 HL033 Ctrl s4,PhiX - Zhang Lab Illumina 60bp 4,589,847
Jan 13 HL033 Exome s5,AL-Exome-CViB-Jan12-AB - Zhang Lab Alice 60bp 1,647,688(overloaded)
Jan 13 HL033 Exome s6,AL-Exome-CViB-Jan12-CDE - Zhang Lab Alice 60bp 13,489(overloaded)
Jan 13 HL033 DigiQ s7, KZ-DigiQ-FS-Jan11/AL-DigiQ-CViB-Jan12 - Zhang Lab Alice/Kun 60bp 5,903,015
Jan 13 HL033 Exome s8, AL-Exome-CViB-Jan12-AB - Zhang Lab Kun 60bp 978,032(overloaded)
Jan 05 HL032 DigiQ s1,AL-DigiQ-CVF-Dec23 - Zhang Lab Alice 60bp 14,950,591
Jan 05 HL032 DigiQ s2,AL-DigiQ-CViB-Dec23 - Zhang Lab Alice 60bp 14,520,807
Jan 05 HL032 DigiQ s3,KZ-DigiQ-DF-Jan04 - Zhang Lab Kun 60bp 10,753,395
Jan 05 HL032 Ctrl s4,PhiX - Zhang Lab Illumina 60bp 25,057(bad DNA)
Jan 05 HL032 RRS s5,KZ-RRS-CVF1-Nov27 - Zhang Lab Kun 60bp 8,295,917
Jan 05 HL032 RRS s6,KZ-RRS-CViF1-Nov27 - Zhang Lab Kun 60bp 8,810,014
Jan 05 HL032 DigiQ s7, KZ-DigiQ-FS-Jan04 - Zhang Lab Kun 60bp 10,177,605
Jan 05 HL032 Exome s8,HMS-GC-PGP8A-Nov1 - Zhang Lab Billy/Luhan 60bp 13,216,056

2009

Jul-Dec

Month Date Probe Set Tube label Conc. x vol. Seq facility Lib. Const. Read length # filtered reads # mappable reads
Dec 29 HL030 Exome s1,PGP9 - Zhang Lab Billy/Luhan 60bp 14,705,217
Dec 29 HL030 Exome s2,PGP9 - Zhang Lab Billy/Luhan 60bp 14,950,591
Dec 29 HL030 Exome s3,PGP9 - Zhang Lab Billy/Luhan 60bp 14,832,179
Dec 29 HL030 Exome s4,NA12878 - Zhang Lab Billy/Luhan 60bp 15,414,631
Dec 29 HL030 Exome s5,NA12878 - Zhang Lab Billy/Luhan 60bp 15,536,069
Dec 29 HL030 Exome s6,NA12878 - Zhang Lab Billy/Luhan 60bp 15,767,169
Dec 29 HL030 Hap s7, HC-MDA-hCell-Dec17-sam006 - Zhang Lab Sam(12/17/09) 60bp 15,094,541
Dec 29 HL030 ? s8,TM - Zhang Lab Palsson 60bp 2,384(Failed)
Dec 26 AL008 Hap s1, HC-MDA-hCell-Dec17-sam003 - Zhang Lab Sam(12/17/09) 60bp 15,826,724
Dec 26 AL008 Hap s2, HC-MDA-hCell-Dec17-sam004 - Zhang Lab Sam(12/17/09) 60bp 7,814,019
Dec 26 AL008 Hap s3, HC-MDA-hCell-Dec17-sam005 - Zhang Lab Sam(12/17/09) 60bp 4,516,674
Dec 26 AL008 DigiQuant s4,PCR-CV-iB(w/PhiX) - Zhang Lab Alice 60bp 5,625,091
Dec 26 AL008 BSPP s5,B2-175bp - Zhang Lab Ida 60bp 2,629,431 22%
Dec 26 AL008 BSPP s6,B2-200bp - Zhang Lab Ida 60bp 3,834,872 21%
Dec 26 AL008 BSPP s7,H2-175bp - Zhang Lab Ida 60bp 8,081,341 26%
Dec 26 AL008 BSPP s8,H2-200bp - Zhang Lab Ida 60bp 10,992,765 30%
Dec 22 AL007 DigiQuant s2,PCR-CV-hiPS-F - Zhang Lab Alice 60bp 0(overloaded)
Dec 22 AL007 Exome s3,CV-iB-ACE - Zhang Lab Kun 60bp 1,235,398
Dec 22 AL007 Exome s4,CV-iB-BD - Zhang Lab Kun 60bp 642,138
Dec 22 AL007 BSPP s5,Har1 - Zhang Lab Ida 60bp 6,610,330 12%
Dec 22 AL007 BSPP s6,Har2 - Zhang Lab Ida 60bp 5,347,364 20%
Dec 22 AL007 BSPP s7,Har3 - Zhang Lab Ida 60bp 15,243,209 26%
Dec 22 AL007 BSPP s8,Har4 - Zhang Lab Ida 60bp 14,904,014 24%
Dec 18 AL006 DigiQuant s2,PCR-CV-hiPS-F(w/phiX) - Zhang Lab Alice 60bp 18,527,480
Dec 18 AL006 RRS s3,DpnII-CV-Fibroblast1 - Zhang Lab Kun 60bp 9,278,480
Dec 18 AL006 RRS s4,DpnII-CV-hiPS-F - Zhang Lab Kun 60bp 7,530,675
Dec 18 AL006 Exome s5,PGP8C - Zhang Lab Billy/Luhan 60bp 11,320,511
Dec 18 AL006 Exome s6,PGP9 - Zhang Lab Billy/Luhan 60bp 7,466,479
Dec 18 AL006 BSPP s7,Har9 - Zhang Lab Jie 60bp 16,529,111 28%
Dec 18 AL006 BSPP s8,Har10 - Zhang Lab Jie 60bp 15,507,608 11%
Dec 09 HL029 Exome s1,PGP4, #8-9 - Zhang Lab Billy/Luhan 60bp 11,299,862
Dec 09 HL029 Exome s2,PGP6, #8-9 - Zhang Lab Billy/Luhan 60bp 10,572,824
Dec 09 HL029 Exome s3,PGP9 - Zhang Lab Billy/Luhan 60bp 9,577,578
Dec 09 HL029 Exome s4,PGP10,#8-9 - Zhang Lab Billy/Luhan 60bp 13,012,173
Dec 09 HL029 Exome s5,CV-hiPS-B - Zhang Lab Alan 60bp 16,316,464
Dec 09 HL029 Exome s6,CV-hiPS-B - Zhang Lab Alan 60bp 17,365,795
Dec 09 HL029 Exome s7,CV-hiPS-B - Zhang Lab Alan 60bp 16,012,994
Dec 09 HL029 Exome s8,CV-hiPS-B - Zhang Lab Alan 60bp 1,602,572
Dec 06 HL028 RRS s1,Dpn-CV-F2 - Zhang Lab Kun 60bp 7,073,505
Dec 06 HL028 RRS s2,Dpn-CV-F2 - Zhang Lab Kun 60bp 7,060,114
Dec 06 HL028 RRS s3,Dpn-CV-iF2 - Zhang Lab Kun 60bp 6,001,805
Dec 06 HL028 RRS s4,Dpn-CV-iF2 - Zhang Lab Kun 60bp 3,264,795
Dec 06 HL028 Exome s5,CV-iB (A,C) - Zhang Lab Billy/Luhan 60bp 7,511,894
Dec 06 HL028 Exome s6,PGP8D - Zhang Lab Billy/Luhan 60bp 9,310,623
Dec 06 HL028 Exome s7,PGP8E - Zhang Lab Billy/Luhan 60bp 11,224,269
Dec 06 HL028 Exome s8,PGP8 - Zhang Lab Billy/Luhan 60bp 5,999,123
Dec 02 HL027 RRS s1,Dpn-CV-iB1 - Zhang Lab Kun 60bp 10,747,192
Dec 02 HL027 RRS s2,Dpn-CV-iF1 - Zhang Lab Kun 60bp 9,030,411
Dec 02 HL027 RRS s3,Dpn-CV-F1 - Zhang Lab Kun 60bp 9,935,148
Dec 02 HL027 RRS s4,CV-iB (A,C) - Zhang Lab Alan 60bp 13,456,232
Dec 02 HL027 Exome s5,CV-iB (A,C) - Zhang Lab Alan 60bp 13,137,026
Dec 02 HL027 Exome s6,CV-iB (B,D,E) - Zhang Lab Alan 60bp 16,102,120
Dec 02 HL027 Exome s7,CV-iB (B,D,E) - Zhang Lab Alan 60bp 15,933,168
Dec 02 HL027 Exome s8,PGP8a - Zhang Lab Billy/Luhan 60bp 11,956,198
Nov 27 HL026 Exome s1,CV-fibroblast (Alice) - Zhang Lab Alan 60bp 17,121,798
Nov 27 HL026 Exome s2,CVF-N(Covaris) - Zhang Lab Alan 60bp 12,577,956
Nov 27 HL026 Exome s3,CVF-N(Covaris) - Zhang Lab Alan 60bp 11,767,869
Nov 27 HL026 Exome s4,CVF-N(Covaris) - Zhang Lab Alan 60bp 12,212,818
Nov 27 HL026 Exome s5,CV-iPS (#1-7) - Zhang Lab Alan 60bp 18,413,190
Nov 27 HL026 Exome s6,DF6(#1-7) - Zhang Lab Alan 60bp 18,035,161
Nov 27 HL026 Exome s7,Foreskin(#1-7) - Zhang Lab Alan 60bp 17,939,296
Nov 27 HL026 Exome s8,CVF-N(USER/S1, A/B) - Zhang Lab Alan 60bp 9,364,209
Nov 27 HL025 Exome s1,PGP3 #8-9 - Zhang Lab Alan 60bp 9,106,173
Nov 27 HL025 Exome s2,PGP5 #8-9 - Zhang Lab Alan 60bp 10,174,527
Nov 23 HL025 Exome s3,PGP7 #8-9 - Zhang Lab Alan 60bp 16,653,644
Nov 23 HL025 Exome s4,CpgSeq Harvard #2 - Zhang Lab Jie 60bp failed
Nov 23 HL025 Exome s5,CpgSeq Harvard #5 - Zhang Lab Jie 60bp 12914061
Nov 23 HL025 Exome s6,CV-fibroblast #1-7 (Alice) - Zhang Lab Alan 60bp 17,745,112
Nov 23 HL025 Exome s7,CV-iPS #1-7 (Alice) - Zhang Lab Alan 60bp 18,466,358
Nov 23 HL025 Exome s8,CV-fibroblast New (#6-7) - Zhang Lab Alan 60bp 10,392,332
Nov 19 HL024 Exome s1,PGP1L, set 1-7 - Zhang Lab Alice(10/28) 60bp 16,060,639
Nov 19 HL024 Exome s2,PGP1L, set 1-7 - Zhang Lab Alice(10/28) 60bp 16,406,685
Nov 19 HL024 Exome s3,PGP1L, set 8 - Zhang Lab Alice(10/28) 60bp 13,861,016
Nov 19 HL024 Exome s4,PGP1L, set 9 - Zhang Lab Alice(10/28) 60bp 12,455,546
Nov 19 HL024 Hap s5,N12 - Zhang Lab Sam 60bp 11,320,511
Nov 19 HL024 Exome s6,PGP8B - Zhang Lab Billy/Luhan 60bp 7,466,479
Nov 19 HL024 BCM s7,P1 (Baylor) - Zhang Lab Baylor 60bp 4,934,597
Nov 19 HL024 BCM s8,P4 (Baylor) - Zhang Lab Baylor 60bp 1,602,572
Nov 13 HL023 Exome s1,PGP1-iPS, set 1-7 - Zhang Lab Alan(11/05) 60bp 12,404,414
Nov 13 HL023 Exome s2,PGP1-iPS, set 1-7 - Zhang Lab Alan(11/05) 60bp 13,314,169
Nov 13 HL023 Exome s3,PGP1-iPS, set 8 - Zhang Lab Alan(11/05) 60bp 16,787,057
Nov 13 HL023 Exome s4,PGP1-iPS, set 9 - Zhang Lab Alan(11/05) 60bp 15,362,879
Nov 13 HL023 Exome s5,DF6-9-9, set 8 - Zhang Lab Alice(10/28) 60bp 16,614,857
Nov 13 HL023 Exome s6,DF6-9-9, set 9 - Zhang Lab Alice(10/28) 60bp 16,897,414
Nov 13 HL023 Exome s7,Foreskin, set 8 - Zhang Lab Alice(10/28) 60bp 16,023,565
Nov 13 HL023 Exome s8,Foreskin, set 9 - Zhang Lab Alice(10/28) 60bp 10,656,758
Nov 09 HL022 Exome s1,DF6-9-9, set 1-7 - Zhang Lab Alice(10/28) 60bp 12,652,000
Nov 09 HL022 Exome s2,DF6-9-9, set 1-7 - Zhang Lab Alice(10/28) 60bp 11,579,830
Nov 09 HL022 Exome s3,Foreskin, set 1-7 - Zhang Lab Alice(10/28) 60bp 9,624,602
Nov 09 HL022 Exome s4,Foreskin, set 1-7 - Zhang Lab Alice(10/28) 60bp 8,249,755
Nov 09 HL022 Exome s5,CV-iPS (new), set 1-7 - Zhang Lab Alan(11/05) 60bp 10,237,538
Nov 09 HL022 Exome s6,CV-iPS (new), set 1-7 - Zhang Lab Alan(11/05) 60bp 10,621,342
Nov 09 HL022 Exome s7,CV-iPS (new), set 1-7 - Zhang Lab Alan(11/05) 60bp 14,439,349
Nov 09 HL022 Exome s8, ChrWGA-N10 - Zhang Lab Sam 60bp 8,624,207
Oct 29 HL020 Exome s1,CV-iPS, set 8 - Zhang Lab Alice(10/28) 60bp 15,416,990
Oct 29 HL020 Exome s2,CV-iPS, set 9 - Zhang Lab Alice(10/28) 60bp 17,569,551
Oct 29 HL020 Exome s3,CV-fibroblast, set 8 - Zhang Lab Alice(10/28) 60bp 16,895,701
Oct 29 HL020 Exome s4,CV-fibroblast, set 9 - Zhang Lab Alice(10/28) 60bp 15,502,227
Oct 29 HL020 Exome s5,NA12878, set 8 - Zhang Lab Alice(10/28) 60bp 16,231,983
Oct 29 HL020 Exome s6,NA12878, set 8 - Zhang Lab Alice(10/28) 60bp 17,231,313
Oct 29 HL020 Exome s7,NA12878, set 9 - Zhang Lab Alice(10/28) 60bp 16,903,121
Oct 29 HL020 Exome s8,NA12878, set 9 - Zhang Lab Alice(10/28) 60bp 13,743,218
Oct 26 HL019 CTM s1,PGP1L-CTM1(HpaII) - Zhang Lab Zymo 40bp
Oct 26 HL019 CTM s2,PGP1L-CTM2(MspI) - Zhang Lab Zymo 40bp
Oct 26 HL019 CTM s3,PGP1L-CTM3(4-RE) - Zhang Lab Zymo 40bp
Oct 26 HL019 Exome s4,PGP4 - Zhang Lab Billy 40bp
Oct 26 HL019 Exome s5,PGP4 - Zhang Lab Billy 40bp
Oct 26 HL019 Exome s6,PGP6 - Zhang Lab Billy 40bp
Oct 26 HL019 Exome s7,PGP6 - Zhang Lab Billy 40bp
Oct 26 HL019 Exome s8,PGP10 - Zhang Lab Billy 40bp
Oct 23 HL018 Exome s1,PGP1-iPS - Zhang Lab Alice(10/09) 40bp 14,503,245
Oct 23 HL018 Exome s2,PGP1-iPS - Zhang Lab Alice(10/09) 40bp 14,834,731
Oct 23 HL018 Exome s3,NA12878_EL_140.2 - Zhang Lab Kun 40bp 16,130,004
Oct 23 HL018 Exome s4,NA12878_EL_140.2 - Zhang Lab Kun 40bp 16,868,359
Oct 23 HL018 Exome s5,NA12878_EL_140.2 - Zhang Lab Kun 40bp 18,464,088
Oct 23 HL018 Exome s6,NA12878_EL_140.2 - Zhang Lab Kun 40bp 18,744,329
Oct 23 HL018 Exome s7,CV-iPS - Zhang Lab Alice(10/09) 40bp 17,369,523
Oct 23 HL018 Exome s8,CV-Fibroblast - Zhang Lab Alice(10/09) 40bp 15,991,415
Oct 20 HL017 Exome s1,PGP1-iPS - Zhang Lab Alice(10/09) 40bp 16,124,303
Oct 20 HL017 Exome s2,DF6-9-9 - Zhang Lab Alice(10/09) 40bp 18,701,054
Oct 20 HL017 Exome s3,Foreskin - Zhang Lab Alice(10/09) 40bp 17,660,876
Oct 20 HL017 Exome s4,CV-iPS - Zhang Lab Alice(10/09) 40bp 17,798,921
Oct 20 HL017 Exome s5,CV-iPS - Zhang Lab Alice(10/09) 40bp 18,054,888
Oct 20 HL017 Exome s6,CV-fibroblast - Zhang Lab Alice(10/09) 40bp 18,120,291
Oct 20 HL017 Exome s7,NA12878_EL_140.2 - Zhang Lab Kun 40bp 17,106,926
Oct 20 HL017 Exome s8,NA12878_EL_140.3 - Zhang Lab Kun 40bp 17,261,477
Oct 18 HL016 Exome s1,CV-fibroblast - Zhang Lab Alice(10/09) 40bp 15,670,145
Oct 18 HL016 Exome s2,CV-fibroblast - Zhang Lab Alice(10/09) 40bp 15,907,544
Oct 18 HL016 Exome s3,CV-iPS - Zhang Lab Alice(10/09) 40bp 15,818,281
Oct 18 HL016 Exome s4,CV-iPS - Zhang Lab Alice(10/09) 40bp 16,080,730
Oct 18 HL016 Exome s5,DF6 - Zhang Lab Alice(10/09) 40bp 16,231,745
Oct 18 HL016 Exome s6,DF6 - Zhang Lab Alice(10/09) 40bp 16,377,593
Oct 18 HL016 Exome s7,Foreskin - Zhang Lab Alice(10/09) 40bp 15,732,166
Oct 18 HL016 Exome s8,Foreskin - Zhang Lab Alice(10/09) 40bp 15,019,512
Oct 15 HL015 Exome s1,PGP8 - Zhang Lab Billy 40bp 13,429,437
Oct 15 HL015 Exome s2,PGP8 - Zhang Lab Billy 40bp 13,978,474
Oct 15 HL015 Exome s3,PGP8 - Zhang Lab Billy 40bp 13,935,910
Oct 15 HL015 Exome s4,PGP9 - Zhang Lab Billy 40bp 13,692,249
Oct 15 HL015 Exome s5,PGP9 - Zhang Lab Billy 40bp 12,912,972
Oct 15 HL015 Exome s6,PGP9 - Zhang Lab Billy 40bp 12,823,767
Oct 15 HL015 Exome s7,NA12878 - Zhang Lab Billy 40bp 16,883,674
Oct 15 HL015 Exome s8,NA12878 - Zhang Lab Billy 40bp 15,379,183
Oct 12 HL014 Exome s1,DF6-9-9 - Zhang Lab Alice(10/09) 40bp 8,305,141
Oct 12 HL014 Exome s2,foreskin - Zhang Lab Alice(10/09) 40bp 8,488,946
Oct 12 HL014 Exome s3,PGP1-ips - Zhang Lab Alice(10/09) 40bp 5,966,433
Oct 12 HL014 Exome s4,CV-ips - Zhang Lab Alice(10/09) 40bp 4,351,085
Oct 12 HL014 Exome s5,CV-fibroblast - Zhang Lab Alice(10/09) 40bp 3,621,861
Oct 12 HL014 Exome s6,PGP7 - Zhang Lab Alice(10/09) 40bp 11,805,391
Oct 12 HL014 Exome s7,PGP8 - Zhang Lab Billy 40bp 14,330,453
Oct 12 HL014 Exome s8,PGP9 - Zhang Lab Billy 40bp 12,477,329
Oct 08 HL013 Exome s1,PGP1 - Zhang Lab Billy 40bp 14872773
Oct 08 HL013 Exome s2,PGP2 - Zhang Lab Billy 40bp 13777534
Oct 08 HL013 Exome s3,PGP3 - Zhang Lab Billy 40bp 10536677
Oct 08 HL013 Exome s4,PGP5 - Zhang Lab Billy 40bp 8445974
Oct 08 HL013 BSPP-30k s5,DF6-9-9-cpg30k - Zhang Lab Ida 40bp 9684020
Oct 08 HL013 BSPP-30k s6,Foreskin - Zhang Lab Ida 40bp 13740681
Oct 08 HL013 USC-Hsieh s7,USC,MH010B xMboI - Zhang Lab Kyle 40bp 18388915
Oct 08 HL013 USC-Hsieh s8,USC,TCF #3 - Zhang Lab Kyle 40bp 14866071
Oct 05 HL011 Exome s1,PGP8 - Zhang Lab Billy 40bp
Oct 05 HL011 Exome s2,PGP8 - Zhang Lab Billy 40bp
Oct 05 HL011 Exome s3,PGP9 - Zhang Lab Billy 40bp
Oct 05 HL011 Exome s4,PGP9 - Zhang Lab Billy 40bp
Oct 05 HL011 Exome s5,NA12878 - Zhang Lab Billy 40bp
Oct 05 HL011 Exome s6,NA12878 - Zhang Lab Billy 40bp
Oct 05 HL011 USC-Hsieh s7,USC,MH010B xMboI - Zhang Lab Kyle 40bp
Oct 05 HL011 USC-Hsieh s8,USC,TCF #3 - Zhang Lab Kyle 40bp
Oct 01 HL012 Exome s1,CV-ips (unsheared) - Zhang Lab Alice&Ida 80bp 16,072,089
Oct 01 HL012 Exome s2,CV-Fibr(unsheared) - Zhang Lab Alice&Ida 80bp 16,826,803
Oct 01 HL012 Exome s3,NA21687, Cpg97k - Zhang Lab Ida 80bp 8,235,105
Oct 01 HL012 Exome s4,PhiX - Zhang Lab Illumina 80bp 14,496,850
Oct 01 HL012 Exome s5,NA21781 - Zhang Lab Ida 80bp 0
Oct 01 HL012 Exome s6,NA21833 - Zhang Lab Ida 80bp 3,293,913
Oct 01 HL012 Exome s7,NA21660 - Zhang Lab Ida 80bp 8,297
Oct 01 HL012 Exome s8,NA21731 - Zhang Lab Ida 80bp 11,048,272
Sept 26 HL010 Exome s1,CV-ips - Zhang Lab Alice(09/21) 40bp 17,770,197 13,270,733
Sept 26 HL010 Exome s2,CV-ips - Zhang Lab Alice 40bp 17,143,085
Sept 26 HL010 Exome s3,CV-fibroblast - Zhang Lab Alice(09/21) 40bp 14,248,797
Sept 26 HL010 Exome s4,CV-fibroblast - Zhang Lab Alice(09/21) 40bp 13,741,749
Sept 26 HL010 Exome s5,DF6-9-9 - Zhang Lab Alice(09/21) 40bp 14,210,912
Sept 26 HL010 Exome s6,foreskin - Zhang Lab Alice(09/21) 40bp 14,514,230
Sept 26 HL010 Exome s7,PGP8 - Zhang Lab Billy 40bp 11,980,992
Sept 26 HL010 Exome s8,PGP9 - Zhang Lab Billy 40bp 13,292,848
Sept 23 AL003 Exome s1,DF6-9-9 - Zhang Lab Alice(09/21) 40bp 16,395,953 13,954,426
Sept 23 AL003 Exome s2,foreskin - Zhang Lab Alice(09/21) 40bp 17,323,121 14,344,756
Sept 23 AL003 Exome s3,PGP1-ips - Zhang Lab Alice(09/21) 40bp 17,005,060
Sept 23 AL003 Exome s4,CV-ips - Zhang Lab Alice(09/21) 40bp 17,848,289 13,344,177
Sept 23 AL003 Exome s5,CV-fibroblast - Zhang Lab Alice(09/21) 40bp 18,152,672 15,372,979
Sept 23 AL003 Exome s6,NA12878-3 - Zhang Lab Alice(09/21) 40bp 18,391,593 14,109,009
Sept 23 AL003 USC-Hsieh s7,DK4#2 - Zhang Lab Kyle 40bp 13,632,900 11,976,351
Sept 23 AL003 USC-HSieh s8,TK9 - Zhang Lab Kyle 40bp 16,272,821 15,168,255
Sept 18 AL002 Exome s1,DF6-9-9 - Zhang Lab Alice(09/15) 40bp 16,173,475
Sept 18 AL002 Exome s2,foreskin - Zhang Lab Alice(09/15) 40bp 10,863,012
Sept 18 AL002 Exome s3,CV-ips - Zhang Lab Alice(09/15) 40bp 8,306,219
Sept 18 AL002 Exome s4,CV-fibroblast - Zhang Lab Alice(09/15) 40bp 3,987,069
Sept 18 AL002 - s5,PhiX-2nd - Zhang Lab Alice 40bp -
Sept 18 AL002 USC-Hsieh s6,MH001 H2 xHeaIII - Zhang Lab Kyle 40bp 19,490,463 18,566,845
Sept 18 AL002 USC-Hsieh s7,MH010B xDpnI - Zhang Lab Kyle 40bp 19,160,830 18,435,611
Sept 18 AL002 USC-Hsieh s8,Tk4 #2 - Zhang Lab Kyle 40bp 16,343,257 15,039,726
Sept 11 AL001 Exome s1,DF6-9-9 - Zhang Lab Alice 40bp 5,115,027
Sept 11 AL001 Exome s2,foreskin - Zhang Lab Alice 40bp 1,480,281
Sept 11 AL001 - s3,PhiX-2nd(re-amplified) - Zhang Lab Alice 40bp 12,640,504
Sept 11 AL001 - s4,PhiX - Zhang Lab - 40bp 12,737,950
Sept 11 AL001 BSPP s5,Na21660-cpg97k - Zhang Lab Jie 40bp 1,624,500 15%
Sept 11 AL001 BSPP s6,DFips-cpg30k+97k - Zhang Lab Jie 40bp 12,230,825 52%
Sept 11 AL001 USC-Hsieh s7,MH010B x DpnI - Zhang Lab Kyle 40bp -
Sept 11 AL001 USC-Hsieh s8,Pol II - Zhang Lab Kyle 40bp 7,545,937 4,581,330
Sept 07 HL007 Exome s1,PGP4 - Zhang Lab Billy 36bp 12,221,023 -
Sept 07 HL007 Exome s2,PGP4 - Zhang Lab Billy 36bp 12,462,164 -
Sept 07 HL007 Exome s3,PGP6 - Zhang Lab Billy 36bp 12,781,093 -
Sept 07 HL007 Exome s4,PGP6 - Zhang Lab Billy 36bp 13,207,084 -
Sept 07 HL007 Exome s5,PGP10 - Zhang Lab Billy 36bp 11,853,340 -
Sept 07 HL007 Exome s6,PGP10 - Zhang Lab Billy 36bp 12,091,086 -
Sept 07 HL007 BSPP-97k s7,50192A - Zhang Lab Jie 36bp 17,131,060 29%
Sept 07 HL007 BSPP-97k s8,50192B - Zhang Lab Jie 36bp 16,378,655 28%
August 29 HL009-3 Exome s1,DF6-9-9 60nM Zhang Lab Alice 40bp -
August 29 HL009-3 Exome s2,DF6-9-9 60nM Zhang Lab Alice 40bp -
August 29 HL009-3 Exome s3,foreskin 45nM Zhang Lab Alice 40bp -
August 29 HL009-3 Exome s4,foreskin 45nM Zhang Lab Alice 40bp -
August 29 HL009-3 Exome s5,PGP1-ips 38nM Zhang Lab Alice 40bp -
August 29 HL009-3 Exome s6,CV-ips 90nM Zhang Lab Alice 40bp -
August 29 HL009-3 Exome s7,CV-fibroblast 76nM Zhang Lab Alice 40bp -
August 29 HL009-3 Exome s8,PGP1 34nM Zhang Lab Alice 40bp -
August 26 HL008 Exome s1,PGP4 - Zhang Lab Billy 40bp 14295243 -
August 26 HL008 Exome s2,PGP6 - Zhang Lab Billy 40bp 15558898 -
August 26 HL008 Exome s3,PGP10 - Zhang Lab Billy 40bp 15871619 -
August 26 HL008 BSPP-97k s4,50192A - Zhang Lab Jie 40bp 10401608 -
August 26 HL008 BSPP-97k s5,50192B - Zhang Lab Jie 40bp 9693893 -
August 26 HL008 Exome s6,Foreskin - Zhang Lab Alice 40bp 14739764 -
August 26 HL008 Exome s7,PGP4(MmeI) - Zhang Lab Billy 40bp 12106286 -
August 26 HL008 Control s8,PhiX - Zhang Lab Illumina 40bp 10161944 -
August 16 HL006 Exome s1,DF6-9-9 - Zhang Lab Alice 40bp 5,684,406 -
August 16 HL006 Exome s2,Foreskin - Zhang Lab Alice 40bp 8,009,671 -
August 16 HL006 Exome s3,Foreskin-lig - Zhang Lab Alice 40bp 8,369,819 -
August 16 HL006 Exome s4,NA12878 - Zhang Lab Alice 40bp 7,487,512 -
August 16 HL006 Exome s5,NA12878-lig - Zhang Lab Alice 40bp 8,411,077 -
August 16 HL006 Exome s6,NA12878 - Zhang Lab Billy 40bp 8,556,271 -
August 16 HL006 Exome s7,PGP10 - Zhang Lab Billy 40bp 9,736,297 -
August 16 HL006 Control s8,PhiX - Zhang Lab Illumina 40bp 6,985,337 -
August 13 HL005 Exome NA12878 - Zhang lab Billy 40bp 15,666,228
August 13 HL005 Exome NA12878 - Zhang lab Billy 40bp 14,091,504
August 13 HL005 BSPP-97k Par1 - Zhang lab Jie Deng 40bp 10,385,536 3,005,889 12%
August 13 HL005 BSPP-97k Par9 - Zhang lab Jie Deng 40bp 7,537,771 3,430,524 21%
August 13 HL005 USC-Hsieh MH010B xMboI - Zhang lab Kyle 40bp 6,699,431 6,125,263
August 13 HL005 USC-Hsieh MH010B xDpnI - Zhang lab Kyle 40bp 2,204,512 2,094,844
August 13 HL005 Exome(end-sequencing) PGP2S-Phu 54.5nM Zhang lab Alice Li 40bp 7,022,465 5,950,793
August 13 HL005 Exome(end-sequencing) PGP2S-iProof 60.6nM Zhang lab Alice Li 40bp 5,798,969 4,756,952
August 09 HL004 Exome s1,DF6-9-9-lig - Zhang Lab Alice 40bp 17,147,112 -
August 09 HL004 Exome s2,DF6-9-9-lig - Zhang Lab Alice 40bp 16,956,048 -
August 09 HL004 Exome s3,Foreskin-lig - Zhang Lab Alice 40bp 16,802,403 -
August 09 HL004 Exome s4,PGP10 - Zhang Lab Billy 40bp 18,644,730 -
August 09 HL004 Exome s5,PGP4 - Zhang Lab Billy 40bp 18,809,762 -
August 09 HL004 Exome s6,PGP4 - Zhang Lab Billy 40bp 18,970,955 -
August 09 HL004 Exome s7,PGP6 - Zhang Lab Billy 40bp 18,723,412 -
August 09 HL004 Exome s8,PGP6 - Zhang Lab Billy 40bp 19,233,480 -
August 05 HL003 Exome s1,DF6-9-9 - Zhang Lab Alice 40bp 4,417,586 2,288,789
August 05 HL003 Exome s2,Foreskin - Zhang Lab Alice 40bp 5,020,353 3,214,546
August 05 HL003 Exome s3,Foreskin-lig - Zhang Lab Alice 40bp 6,660,328 3,119,331
August 05 HL003 Exome s4,NA12878 - Zhang Lab Alice 40bp 3,727,520 1,981,326
August 05 HL003 Exome s5,NA12878-lig - Zhang Lab Alice 40bp 6,455,281 3,253,093
August 05 HL003 Exome s6,NA12878 - Zhang Lab Billy 40bp 14,992,076 8,643,897
August 05 HL003 Exome s7,PGP10 - Zhang Lab Billy 40bp 19,423,381 11,040,240
August 05 HL003 Control s8,PhiX - Zhang Lab Illumina 40bp 20,078,536 19,817,515
July 28 HL002 Exome s1,PhiX - Zhang Lab Illumina 40bp 19474917 -
July 28 HL002 Exome s2,Hues 6 ES-Dscp - Zhang Lab Kun 40bp 9991852 -
July 28 HL002 Exome s3,Hues 6 ES-trp - Zhang Lab Kun 40bp 8386791 -
July 28 HL002 Exome s4,NA12878 - Zhang Lab Alice 40bp 15015962 -
July 28 HL002 Exome s5,NA12878 - Zhang Lab Alice 40bp 15092576 -
July 28 HL002 Exome s6,NA12878 - Zhang Lab Alice 40bp 15223607 -
July 28 HL002 Exome s7,PGP10 - Zhang Lab Alice 40bp 15059266 -
July 28 HL002 RNA s8,CES8k-Hybrid1-ES - Zhang Lab Kun 40bp 8178891 -

Jan-Jun

Month Date Probe Set Tube label Conc. x vol. Seq facility Lib. Const. Read length # filtered reads # mappable reads
Feb 6 BSPP-30k-PE BJ 75.4nM x 15ul; BioGem Jie 36bp x 2 7,662,828 2,535,784
Feb 6 BSPP-30k-PE Hybrid_1 87.6nM x 15ul; BioGem Jie 36bp x 2 6,829,142 1,946,531
Feb 6 BSPP-30k-PE PGP1_F 106nM x 15ul; BioGem Jie 36bp x 2 8,441,376 2,854,604
Feb 6 BSPP-30k-PE HUES12 74.9nM x 15ul; BioGem Jie 36bp x 2 7,404,514 1,424,697
Feb 6 BSPP-30k-PE PGP1_iPS1 90.3nM x 15ul; BioGem Jie 36bp x 2 5,617,832 1,899,427
Feb 6 BSPP-30k-PE PGP1_L 77.6nM x 15ul; BioGem Jie 36bp x 2 5,258,188 2,220,886
Feb 6 BSPP-30k-PE PGP3_L 80.9nM x 15ul; BioGem Jie 36bp x 2 5,286,442 1,838,971
Feb 6 BSPP-30k-PE PGP9_L 96.9nM x 15ul; BioGem Jie 36bp x 2 5,689,552 2,292,028
March 13 Exome PGP1-CTRL 48.5ng/ul; 30ul Billy Li (Harvard) Alice Li 40bp 9,707,995 7,655,774
March 13 Exome PGP1-shaked 46ng/ul; 30ul Billy Li (Harvard) Alice Li 40bp 9,424,752 7,561,445
May 25 Exome PGP1E0509A 77nM; 40ul BioGem Alice Li 76bp 7,471,741 1,086,264
May 25 Exome PGP2E0509A 64nM; 40ul BioGem Alice Li 76bp 5,014,823 2,595,521
May 25 Exome PGP3E0509A 49.5nM; 40ul BioGem Alice Li 76bp 5,358,442 3,213,790
May 25 Exome NA12878E0509A 60nM; 40ul BioGem Alice Li 76bp 7,360,495 2,673,495
May 25 Exome PGP1E0509k 19nM; 40ul BioGem Kun Zhang 76bp 3,520,981 2,350,708
May 25 Exome PGP2E0509k 20nM; 40ul BioGem Kun Zhang 76bp 5,095,881 2,568,349
May 25 Exome PGP3E0509k 19nM; 40ul BioGem Kun Zhang 76bp 3,734,068 1,989,542
May 25 Exome NA12878E0509k 33nM; 40ul BioGem Kun Zhang 76bp 3,900,764 778,134
May 26 BSPP_end seq NA21070*1 100406 captured targets 25.3ng/ul (96nM) x 15ul; Yuan Gao Jie/Kun 40bp 2,535,463
May 26 BSPP_end seq NA21070*1 100406 normalized captured targets 23.1ng/ul (87nM) x 15ul; Yuan Gao Jie/Kun 40bp 2,377,687
May 29 Exome(end sequencing) PGP2_052909A 111nM; 15ul Yuan Gao Alice Li 40bp 6,390,979
May 29 Exome(end sequencing) PGP3_052909A 126nM; 15ul Yuan Gao Alice Li 40bp 6,110,991
June 4 Exome PGP5-1-060809 62.5nM; 10ul BioGem Alice Li 36bp 14,404,283 10,812,047
June 4 Exome PGP5-2-060809 65.7nM; 10ul BioGem Alice Li 36bp 14,994,770 11,253,456
June 4 Exome PGP7-1-060809 75.5nM; 10ul BioGem Alice Li 36bp 13,384,832 9,712,648
June 4 Exome PGP7-2-060809 79.7nM; 20ul BioGem Alice Li 36bp 14,204,382/13,509,137 10,519,374/9,961,481
June 8 BSPP DF6-9-9_P16(4) 11nM x 10ul x 2 lanes; BioGem Jie 36bp 4,688,926
June 8 BSPP foreskin 15nM x 10ul x 1 lane. BioGem Jie 36bp 3,320,865 1,825,557
June 10 Exome PGP1-3-061009 34nM; 15ul Bing Ren Alice Li 76bp 5,802,565
June 10 Exome PGP2-3-061009 25nM; 15ul Bing Ren Alice Li 76bp 3,193,644
June 10 Exome PGP3-3-061009 22nM; 15ul Bing Ren Alice Li 76bp 2,465,788
June 10 Exome NA12878-3-061009 22nM; 15ul Bing Ren Alice Li 76bp 1,285,265
June 10 BSPP NA21070*1_100406_97k 21.2nM x 14ul; Bing Ren Jie 76bp 2,682,703 424,191
June 10 BSPP DF6-9-9_P16(4)_30k 21.2nM x 14ul; Bing Ren Jie 76bp 918,811 151,519
June 10 BSPP foreskin_30k 21.2nM x 14ul; Bing Ren Jie 76bp 424,770 65,177
June 18 Exome PGP5-1-060809 62.5nM; 5ul Bing Ren Alice Li 41bp 4,122,460
June 18 Exome PGP5-2-060809 65.7nM; 5ul Bing Ren Alice Li 41bp 3,907,906
June 18 Exome PGP7-1-060809 75.5nM; 5ul Bing Ren Alice Li 41bp 1,419,496
June 18 CES27k9bp_end sequening Hybrid_1_CES27k9bp 4.3ng/ul (37nM) x 5ul Bing Ren Jie 41bp 7,484,832
June 18 CES27k9bp_end sequening BJ_CES27k9bp 7.2ng/ul (62nM) x 5ul Bing Ren Jie 41bp 5,643,984
June 18 BSPP DF6-9-9_P16(4)_97k_repeat 11nM x 5ul Bing Ren Jie 41bp 4,761,133
June 18 BSPP foreskin_97k_repeat 7.5nM x 5ul Bing Ren Jie 41bp 6,683,303