Date
|
Run
|
Lane
|
Tube Label
|
Seq facility
|
Read length
|
# filtered reads (bps)
2011
Jul-Dec
Date
|
Run
|
Lane
|
Tube Label
|
Seq facility
|
Read length
|
# filtered reads (bps)
|
111109 |
HL108 |
S1 |
YZ_UNC-5caC-DIP-Oct27 |
Zhang Lab |
40+7 |
N/A
|
111109 |
HL108 |
S2 |
YZ_UNC-5caC-DIP-Oct27 |
Zhang Lab |
40+7 |
N/A
|
111109 |
HL108 |
S3 |
YZ_UNC-INPUT-Oct27 |
Zhang Lab |
40+7 |
N/A
|
111109 |
HL108 |
S4 |
YZ_UNC-IgG-DIP-Oct27 |
Zhang Lab |
40+7 |
N/A
|
111109 |
HL108 |
S5 |
YZ_UNC-5fC-DIP-Oct27 |
Zhang Lab |
40+7 |
N/A
|
111109 |
HL108 |
S6 |
RL-RNA-88_96-Oct28 |
Zhang Lab |
40+7 |
N/A
|
111109 |
HL108 |
S7 |
RL-Hap-73_80-Nov8 |
Zhang Lab |
40+7 |
N/A
|
111109 |
HL108 |
S8 |
RL-Hap-73_80-Nov8 |
Zhang Lab |
40+7 |
N/A
|
111030 |
HL107 |
S1 |
RL-RNA-88_96-Oct28 |
Zhang Lab |
100+7+100 |
N/A
|
111030 |
HL107 |
S2 |
RL-RNA-88_96-Oct28 |
Zhang Lab |
100+7+100 |
N/A
|
111030 |
HL107 |
S3 |
RL-RNA-88_96-Oct28 |
Zhang Lab |
100+7+100 |
N/A
|
111030 |
HL107 |
S4 |
UCLA-Blood_Schizo_SeqLib2-Oct3 |
Zhang Lab |
100+7+100 |
N/A
|
111030 |
HL107 |
S5 |
UCLA-Blood_Schizo_SeqLib2-Oct3 |
Zhang Lab |
100+7+100 |
N/A
|
111030 |
HL107 |
S6 |
UCLA-Blood_Schizo_SeqLib2-Oct3 |
Zhang Lab |
100+7+100 |
N/A
|
111030 |
HL107 |
S7 |
UCLA-Blood_Schizo_SeqLib2-Oct3 |
Zhang Lab |
100+7+100 |
N/A
|
111030 |
HL107 |
S8 |
UCLA-Blood_Schizo_SeqLib2-Oct3 |
Zhang Lab |
100+7+100 |
N/A
|
111019 |
HL106 |
S1 |
NP-BSPP-Norm_Conc-Sep18 |
Zhang Lab |
110+7+110 |
N/A
|
111019 |
HL106 |
S2 |
NP-BSPP-Norm_Conc-Sep18 |
Zhang Lab |
110+7+110 |
N/A
|
111019 |
HL106 |
S3 |
NP-BSPP-Norm_Conc-Sep18 |
Zhang Lab |
110+7+110 |
N/A
|
111019 |
HL106 |
S4 |
HC-Ecoli-MDA_Nx1_8-Oct9/RL-RNA-88_96-Oct18 |
Zhang Lab |
110+7+110 |
N/A
|
111019 |
HL106 |
S5 |
NP-BSPP-Norm_Conc-Sep18 |
Zhang Lab |
110+7+110 |
N/A
|
111019 |
HL106 |
S6 |
NP-BSPP-Norm_Conc-Sep18 |
Zhang Lab |
110+7+110 |
N/A
|
111019 |
HL106 |
S7 |
NP-BSPP-Norm_Conc-Sep18 |
Zhang Lab |
110+7+110 |
N/A
|
111019 |
HL106 |
S8 |
NP-BSPP-Norm_Conc-Sep18 |
Zhang Lab |
110+7+110 |
N/A
|
111013 |
HL105 |
S1 |
AL-Exome-HFF+iPS-Oct7 |
Zhang Lab |
100+7 |
3,770,309,000
|
111013 |
HL105 |
S2 |
AL-Exome-HFF+iPS-Oct7 |
Zhang Lab |
100+7 |
3,810,129,000
|
111013 |
HL105 |
S3 |
AL-Exome-HFF+iPS-Oct7 |
Zhang Lab |
100+7 |
3,848,633,000
|
111013 |
HL105 |
S4 |
AL-Exome-HFF+iPS-Oct7 |
Zhang Lab |
100+7 |
3,793,174,000
|
111013 |
HL105 |
S5 |
AL-Exome-HFF+iPS-Oct7 |
Zhang Lab |
100+7 |
3,665,699,000
|
111013 |
HL105 |
S6 |
AL-Exome-HFF+iPS-Oct7/JG-Microbiome-9>12-Oct11_1X |
Zhang Lab |
100+7 |
3,684,441,000
|
111013 |
HL105 |
S7 |
NP-BSPP-LC_54C-Oct6 |
Zhang Lab |
100+7 |
2,845,333,000
|
111013 |
HL105 |
S8 |
NP-BSPP-LC_52C-Oct6 |
Zhang Lab |
100+7 |
2,694,544,000
|
111004 |
HL104 |
S1 |
RL-RNA-Indx7_15-Sep2 |
Frazer Lab |
100+7+100 |
23,010,743,000
|
111004 |
HL104 |
S2 |
RL-RNA-Indx7_15-Sep2 |
Frazer Lab |
100+7+100 |
22,709,742,000
|
111004 |
HL104 |
S3 |
RL-RNA-Indx7_15-Sep2 |
Frazer Lab |
100+7+100 |
21,423,147,000
|
111004 |
HL104 |
S4 |
NP-BSPP-Ind1_45-Sep18 |
Frazer Lab |
100+7+100 |
21,524,694,000
|
111004 |
HL104 |
S5 |
NP-BSPP-Ind1_45-Sep18 |
Frazer Lab |
100+7+100 |
22,260,363,000
|
111004 |
HL104 |
S6 |
NP-BSPP-Ind1_45-Sep18 |
Frazer Lab |
100+7+100 |
21,767,215,000
|
111004 |
HL104 |
S7 |
NP-BSPP-Ind1_45-Sep18 |
Frazer Lab |
100+7+100 |
22,601,042,000
|
111004 |
HL104 |
S8 |
UCLA-Blood_Schizo_SeqLib2-Oct3 |
Frazer Lab |
100+7+100 |
22,537,567,000
|
110923 |
HL103 |
S1 |
Mix_1 |
Zhang Lab |
80+7 |
2,353,084,000
|
110923 |
HL103 |
S2 |
Mix_2 |
Zhang Lab |
80+7 |
2,798,058,000
|
110923 |
HL103 |
S3 |
Mix_3 |
Zhang Lab |
80+7 |
2,587,534,000
|
110923 |
HL103 |
S4 |
Mix_4 |
Zhang Lab |
80+7 |
1,886,856,000
|
110923 |
HL103 |
S5 |
Mix_5 |
Zhang Lab |
80+7 |
0
|
110923 |
HL103 |
S6 |
AL-Exome-Hues9-Sep20 |
Zhang Lab |
80+7 |
1,341,156,000
|
110923 |
HL103 |
S7 |
AL-Exome-Hues9-Sep20 |
Zhang Lab |
80+7 |
1,168,985,000
|
110923 |
HL103 |
S8 |
AL-Exome-Hues9-Sep20 |
Zhang Lab |
80+7 |
2,408,391,000
|
110907 |
HL102 |
S1 |
LS-5FC_Dipseq-Input_Ctrl-Sep2 |
Zhang Lab |
36 |
1,200,789,000
|
110907 |
HL102 |
S2 |
LS-5FC_Dipseq-Input_Ctrl-Sep2 |
Zhang Lab |
36 |
1,224,362,000
|
110907 |
HL102 |
S3 |
LS-5FC_Dipseq-Input_KD-Sep2 |
Zhang Lab |
36 |
1,271,789,000
|
110907 |
HL102 |
S4 |
LS-5FC_Dipseq-Input_KD-Sep2 |
Zhang Lab |
36 |
1,075,646,000
|
110907 |
HL102 |
S5 |
LS-5FC_Dipseq-IP_Ctrl-Sep2 |
Zhang Lab |
36 |
1,022,725,000
|
110907 |
HL102 |
S6 |
LS-5FC_Dipseq-IP_Ctrl-Sep2 |
Zhang Lab |
36 |
1,231,843,000
|
110907 |
HL102 |
S7 |
LS-5FC_Dipseq-IP_KD-Sep2 |
Zhang Lab |
36 |
1,242,139,000
|
110907 |
HL102 |
S8 |
LS-5FC_Dipseq-IP_KD-Sep2 |
Zhang Lab |
36 |
1,179,527,000
|
110902 |
HL101 |
S1 |
RL-hap-1_12-Sep2 |
Zhang Lab |
60+7 |
1,719,847,000
|
110902 |
HL101 |
S2 |
RL-hap-1_12-Sep2 |
Zhang Lab |
60+7 |
1,812,994,000
|
110902 |
HL101 |
S3 |
RL-hap-13_23-Sep2 |
Zhang Lab |
60+7 |
1,849,651,000
|
110902 |
HL101 |
S4 |
RL-hap-13_23-Sep2 |
Zhang Lab |
60+7 |
1,572,285,000
|
110902 |
HL101 |
S5 |
MC-hap-1_11-Sep2 |
Zhang Lab |
60+7 |
1,660,109,000
|
110902 |
HL101 |
S6 |
MC-hap-1_11-Sep2 |
Zhang Lab |
60+7 |
1,726,858,000
|
110902 |
HL101 |
S7 |
RL-RNA-Indx7_15-Sep2 |
Zhang Lab |
60+7 |
1,977,301,000
|
110902 |
HL101 |
S8 |
RL-RNA-Indx7_15-Sep2 |
Zhang Lab |
60+7 |
1,840,050,000
|
110811 |
HL100 |
S1 |
NP-3SMUips-Ind21_23-Aug4 |
Zhang Lab |
80+7 |
1,204,850,000
|
110811 |
HL100 |
S2 |
NP-3SMUips-Ind21_23-Aug4 |
Zhang Lab |
80+7 |
1,328,767,000
|
110811 |
HL100 |
S3 |
NP-3SMUips-Ind21_23-Aug4 |
Zhang Lab |
80+7 |
1,343,603,000
|
110811 |
HL100 |
S4 |
Al-Exome-D+E+F-Jun10 |
Zhang Lab |
80+7 |
1,119,655,000
|
110811 |
HL100 |
S5 |
JG-Microbiome-Ecoli3_Ind11-Aug10 |
Zhang Lab |
80+7 |
905,846,000
|
110811 |
HL100 |
S6 |
JG-Microbiome-Ecoli4_Ind12-Aug10 |
Zhang Lab |
80+7 |
388,600,000
|
110811 |
HL100 |
S7 |
AG-WGBS-Imprint150-Aug11 |
Zhang Lab |
80+7 |
1,204,722,000
|
110811 |
HL100 |
S8 |
HC-SAG-Ecoli_M_N_IND1_4-Aug11 |
Zhang Lab |
80+7 |
1,101,521,000
|
110726 |
HL099 |
S1 |
RL-RNAseq-1_6-Jul12 |
Zhang Lab |
80+6 |
1,873,470,000
|
110726 |
HL099 |
S2 |
RL-RNAseq-1_6-Jul12 |
Zhang Lab |
80+6 |
1,951,951,000
|
110726 |
HL099 |
S3 |
RL-RNAseq-Ind1_4Mix-Jul25 |
Zhang Lab |
80+6 |
1,856,962,000
|
110726 |
HL099 |
S4 |
RL-RNAseq-Ind1_4Mix-Jul25 |
Zhang Lab |
80+6 |
1,840,794,000
|
110726 |
HL099 |
S5 |
RL-RNAseq-Ind1_4Mix-Jul25 |
Zhang Lab |
80+6 |
1,716,761,000
|
110726 |
HL099 |
S6 |
RL-RNAseq-Ind1_4Mix-Jul25 |
Zhang Lab |
80+6 |
1,832,192,000
|
110726 |
HL099 |
S7 |
UCSD-MH-EColi1_2-Jul26 |
Zhang Lab |
80+6 |
1,594,973,000
|
110726 |
HL099 |
S8 |
UCSD-MH-EColi3_4-Jul26 |
Zhang Lab |
80+6 |
1,841,498,000
|
110714 |
HL098 |
S1 |
Al-Exome-D+E+F-Jun10/RL-RNAseq-1_6-Jul12 |
Zhang Lab |
80+7+80 |
1,961,699,000
|
110714 |
HL098 |
S2 |
AL-Exome-CVI+CVB-Jun29 |
Zhang Lab |
80+7+80 |
3,306,998,000
|
110714 |
HL098 |
S3 |
AL-Exome-CVI+CVB-Jun29 |
Zhang Lab |
80+7+80 |
3,280,518,000
|
110714 |
HL098 |
S4 |
AL-Exome-CVI+CVB-Jun29 |
Zhang Lab |
80+7+80 |
3,290,176,000
|
110714 |
HL098 |
S5 |
AL-Exome-CVI+CVB-Jun29 |
Zhang Lab |
80+7+80 |
3,252,141,000
|
110714 |
HL098 |
S6 |
AL-Exome-CVI+CVB-Jun29 |
Zhang Lab |
80+7+80 |
3,252,868,000
|
110714 |
HL098 |
S7 |
AL-Exome-CVI+CVB-Jun29 |
Zhang Lab |
80+7+80 |
3,259,014,000
|
110714 |
HL098 |
S8 |
AL-Exome-CVI+CVB-Jun29 |
Zhang Lab |
80+7+80 |
3,147,221,000
|
Jan-Jun
Date
|
Run
|
Lane
|
Tube Label
|
Seq facility
|
Read length
|
# filtered reads (bps)
|
110626 |
HL097 |
S1 |
AL-Exome-12plex-Jun19 |
Zhang Lab |
80+7 |
2,990,440,000
|
110626 |
HL097 |
S2 |
AL-Exome-12plex-Jun19 |
Zhang Lab |
80+7 |
3,109,455,000
|
110626 |
HL097 |
S3 |
AL-Exome-12plex-Jun19 |
Zhang Lab |
80+7 |
3,069,859,000
|
110626 |
HL097 |
S4 |
AL-Exome-12plex-Jun19 |
Zhang Lab |
80+7 |
3,054,658,000
|
110626 |
HL097 |
S5 |
AL-Exome-12plex-Jun19 |
Zhang Lab |
80+7 |
3,055,581,000
|
110626 |
HL097 |
S6 |
AL-Exome-12plex-Jun19 |
Zhang Lab |
80+7 |
3,022,079,000
|
110626 |
HL097 |
S7 |
AL-Exome-12plex-Jun19 |
Zhang Lab |
80+7 |
2,973,142,000
|
110626 |
HL097 |
S8 |
AL-Exome-12plex-Jun19 |
Zhang Lab |
80+7 |
2,858,595,000
|
110619 |
HL096 |
S1 |
AL-Exome-12plex-Jun19 |
Zhang Lab |
80+7+80 |
3,096,873,000
|
110619 |
HL096 |
S2 |
AL-Exome-12plex-Jun19 |
Zhang Lab |
80+7+80 |
3,142,447,000
|
110619 |
HL096 |
S3 |
AL-Exome-12plex-Jun19 |
Zhang Lab |
80+7+80 |
3,152,777,000
|
110619 |
HL096 |
S4 |
AL-Exome-12plex-Jun19 |
Zhang Lab |
80+7+80 |
3,146,637,000
|
110619 |
HL096 |
S5 |
AL-Exome-12plex-Jun19 |
Zhang Lab |
80+7+80 |
3,130,481,000
|
110619 |
HL096 |
S6 |
AL-Exome-12plex-Jun19 |
Zhang Lab |
80+7+80 |
3,113,755,000
|
110619 |
HL096 |
S7 |
AL-Exome-12plex-Jun19 |
Zhang Lab |
80+7+80 |
3,140,271,000
|
110619 |
HL096 |
S8 |
AL-Exome-12plex-Jun19 |
Zhang Lab |
80+7+80 |
3,063,317,000
|
110608 |
HL095 |
S1 |
AL-Exome-e7_B#2-Jun1 |
Zhang Lab |
80+7 |
2,948,051,000
|
110608 |
HL095 |
S2 |
AL-Exome-e7_B#2-Jun1 |
Zhang Lab |
80+7 |
3,072,660,000
|
110608 |
HL095 |
S3 |
UCSD-MH-EColi1_4-May4 |
Zhang Lab |
80+7 |
2,863,441,000
|
110608 |
HL095 |
S4 |
RL-Hap_RNAseq-1_13-Jun6 |
Zhang Lab |
80+7 |
1,552,728,000
|
110608 |
HL095 |
S5 |
AL-Exome-e7_A#4-Jun1 |
Zhang Lab |
80+7 |
3,083,656,000
|
110608 |
HL095 |
S6 |
AL-Exome-e7_A#4-Jun1 |
Zhang Lab |
80+7 |
3,123,515,000
|
110608 |
HL095 |
S7 |
AL-Exome-e7_5#9-Jun1 |
Zhang Lab |
80+7 |
3,016,211,000
|
110608 |
HL095 |
S8 |
AL-Exome-e7_5#9-Jun1 |
Zhang Lab |
80+7 |
2,951,944,000
|
110514 |
HL094 |
S1 |
NP-Lib_free_Ind1_24-May3 |
Zhang Lab |
110+7+110 |
4,581,981,000
|
110514 |
HL094 |
S2 |
NP-Lib_free_Ind1_24-May3 |
Zhang Lab |
110+7+110 |
4,742,654,000
|
110514 |
HL094 |
S3 |
NP-Lib_free_Ind1_24-May3 |
Zhang Lab |
110+7+110 |
4,721,226,000
|
110514 |
HL094 |
S4 |
NP-Lib_free_Ind1_24-May3 + HC-MDA-Mouse_2h_C5-Mar2 |
Zhang Lab |
110+7+110 |
4,538,689,000
|
110514 |
HL094 |
S5 |
NP-Lib_free_Ind1_24-May3 |
Zhang Lab |
110+7+110 |
4,818,462,000
|
110514 |
HL094 |
S6 |
NP-Lib_free_Ind1_24-May3 |
Zhang Lab |
110+7+110 |
4,789,628,000
|
110514 |
HL094 |
S7 |
NP-Lib_free_Ind1_24-May3 |
Zhang Lab |
110+7+110 |
4,730,124,000
|
110514 |
HL094 |
S8 |
NP-Lib_free_Ind1_24-May3 |
Zhang Lab |
110+7+110 |
4,668,899,000
|
110417 |
HL093 |
S1 |
AL-SCG-4_Plex-Feb14 |
Zhang Lab |
80+6 |
1,885,472,000
|
110417 |
HL093 |
S2 |
AL-SCG-4_Plex-Feb14 |
Zhang Lab |
80+6 |
1,944,884,000
|
110417 |
HL093 |
S3 |
AL-SCG-4_Plex-Feb14 |
Zhang Lab |
80+6 |
1,926,253,000
|
110417 |
HL093 |
S4 |
AL-SCG-4_Plex-Feb14 |
Zhang Lab |
80+6 |
1,886,033,000
|
110417 |
HL093 |
S5 |
AL-Genome-PGP1F-Jul30 |
Zhang Lab |
80+6 |
2,231,073,000
|
110417 |
HL093 |
S6 |
AL-Genome-PGP1ips-Jul30 |
Zhang Lab |
80+6 |
2,269,443,000
|
110417 |
HL093 |
S7 |
AL-Exome-HGPS(2)-Apr10 |
Zhang Lab |
80+6 |
2,863,990,000
|
110417 |
HL093 |
S8 |
AL-Exome-HGPS(2)-Apr10 |
Zhang Lab |
80+6 |
2,743,128,000
|
110408 |
HL092 |
S1 |
Al-Exome-HFF1013-Mar18 |
Zhang Lab |
100+6 |
2,522,988,000
|
110408 |
HL092 |
S2 |
Al-Exome-e75#4-Mar18 |
Zhang Lab |
100+6 |
2,567,812,000
|
110408 |
HL092 |
S3 |
AL-SCG-4_Plex-Feb14 |
Zhang Lab |
100+6 |
197,385,000
|
110408 |
HL092 |
S4 |
AL-SCG-4_Plex-Feb14 |
Zhang Lab |
100+6 |
208,528,000
|
110408 |
HL092 |
S5 |
AL-Genome-PGP1F-Jul30 |
Zhang Lab |
100+6 |
798,720,000
|
110408 |
HL092 |
S6 |
UCSD-MH-1_10-Mar28+JG-Microbiome-Ecoli_test-Mar22 |
Zhang Lab |
100+6 |
2,548,739,000
|
110408 |
HL092 |
S7 |
UCSD-MH-11_21-Mar28+JG-Microbiome-Ecoli_test-Mar22 |
Zhang Lab |
100+6 |
2,359,216,000
|
110408 |
HL092 |
S8 |
AL-Genome-PGP1ips-Jul30 |
Zhang Lab |
100+6 |
850,078,000
|
110323 |
HL091 |
S1 |
NP-220K-Belmonte_Ind8-12-March10 |
Zhang Lab |
100+6 |
2,756,670,000
|
110323 |
HL091 |
S2 |
NP-220K-Belmonte_Ind8-12-March10 |
Zhang Lab |
100+6 |
2,858,982,000
|
110323 |
HL091 |
S3 |
Al-Exome-e7B#1-Mar18 |
Zhang Lab |
100+6 |
3,856,415,000
|
110323 |
HL091 |
S4 |
Al-Exome-e7B#1-Mar18 |
Zhang Lab |
100+6 |
3,829,631,000
|
110323 |
HL091 |
S5 |
Al-Exome-e7A#1-Mar18 |
Zhang Lab |
100+6 |
3,659,345,000
|
110323 |
HL091 |
S6 |
Al-Exome-e7A#1-Mar18 |
Zhang Lab |
100+6 |
3,652,533,000
|
110323 |
HL091 |
S7 |
Al-Exome-HFF1013-Mar18 |
Zhang Lab |
100+6 |
3,768,226,000
|
110323 |
HL091 |
S8 |
Al-Exome-e75#4-Mar18 |
Zhang Lab |
100+6 |
3,227,472,000
|
110318 |
HL090 |
S1 |
AL-Exome-cAWS#1-Mar18 |
Zhang Lab |
80 |
|
110318 |
HL090 |
S2 |
AL-Exome-cAWS#1-Mar18 |
Zhang Lab |
80 |
|
110318 |
HL090 |
S3 |
AL-Exome-HGPS-Mar18 |
Zhang Lab |
80 |
|
110318 |
HL090 |
S4 |
AL-Exome-HGPS-Mar18 |
Zhang Lab |
80 |
|
110318 |
HL090 |
S5 |
AL-Exome-cHGPS#1-Mar18 |
Zhang Lab |
80 |
|
110318 |
HL090 |
S6 |
AL-Exome-cHGPS#1-Mar18 |
Zhang Lab |
80 |
|
110318 |
HL090 |
S7 |
Al-Exome-AWS-Mar18 |
Zhang Lab |
80 |
|
110318 |
HL090 |
S8 |
Al-Exome-AWS-Mar18 |
Zhang Lab |
80 |
|
110307 |
HL089 |
S1 |
NP-220K-PGP_Exp1-3_Ind1-7-Feb14 |
Zhang Lab |
80+6+80 |
|
110307 |
HL089 |
S2 |
NP-220K-PGP_Exp1-3_Ind1-7-Feb14 |
Zhang Lab |
80+6+80 |
|
110307 |
HL089 |
S3 |
NP-220K-Parkinson_Ind1-18-Feb15 |
Zhang Lab |
80+6+80 |
|
110307 |
HL089 |
S4 |
NP-220K-Parkinson_Ind1-18-Feb15 |
Zhang Lab |
80+6+80 |
|
110307 |
HL089 |
S5 |
NP-220K-Parkinson_Ind1-18-Feb15 |
Zhang Lab |
80+6+80 |
|
110307 |
HL089 |
S6 |
NP-220K-Parkinson_Ind1-18-Feb15 |
Zhang Lab |
80+6+80 |
|
110307 |
HL089 |
S7 |
NP-220K-Parkinson_Ind1-18-Feb15 |
Zhang Lab |
80+6+80 |
|
110307 |
HL089 |
S8 |
NP-220K-Parkinson_Ind1-18-Feb15 |
Zhang Lab |
80+6+80 |
|
110303 |
HL088 |
S1 |
AL-MsExome-2eiPS2P5-Feb4 |
Zhang Lab |
80+6 |
2,735,432,000
|
110303 |
HL088 |
S2 |
AL-MsExome-2eiPS2P5-Feb4 |
Zhang Lab |
80+6 |
2,802,442,000
|
110303 |
HL088 |
S3 |
AL-MsExome-Ie12P20-Feb4 |
Zhang Lab |
80+6 |
2,676,336,000
|
110303 |
HL088 |
S4 |
AL-MsExome-Ie12P20-Feb4 |
Zhang Lab |
80+6 |
2,683,055,000
|
110303 |
HL088 |
S5 |
AL-MsExome-B6MEF-Feb4 |
Zhang Lab |
80+6 |
2,612,353,000
|
110303 |
HL088 |
S6 |
AL-MsExome-B6MEF-Feb4 |
Zhang Lab |
80+6 |
2,650,632,000
|
110303 |
HL088 |
S7 |
AL-Exome-HuSc-Mar2 |
Zhang Lab |
80+6 |
2,688,100,000
|
110303 |
HL088 |
S8 |
NP-220K-African_UPenn1_3-Feb16 |
Zhang Lab |
80+6 |
2,856,129,000
|
110119 |
HL087 |
S1 |
AL-exome-2HFF_P6-Jan16 |
Zhang Lab |
80+7+80 |
3,152,150,000
|
110119 |
HL087 |
S2 |
AL-exome-2HFF_7_10_3M-Jan16 |
Zhang Lab |
80+7+80 |
3,216,929,000
|
110119 |
HL087 |
S3 |
AL-exome-2HFF_8d_10-Jan16 |
Zhang Lab |
80+7+80 |
3,230,879,000
|
110119 |
HL087 |
S4 |
HC-MDA-Ecoli-SAGs(NX1-NX8)-Jan17 |
Zhang Lab |
80+7+80 |
2,531,830,000
|
110119 |
HL087 |
S5 |
MouseMetaGen.SetA.Ind13to16-Dec15 |
Zhang Lab |
80+7+80 |
2,831,831,000
|
110119 |
HL087 |
S6 |
MouseMetaGen.SetA.Ind13to16-Dec15 |
Zhang Lab |
80+7+80 |
2,788,825,000
|
110119 |
HL087 |
S7 |
MouseMetaGen.SetA.Ind13to16-Dec15 |
Zhang Lab |
80+7+80 |
2,804,556,000
|
110119 |
HL087 |
S8 |
MouseMetaGen.SetA.Ind13to16-Dec15 |
Zhang Lab |
80+7+80 |
2,755,653,000
|
110112 |
HL086 |
S1 |
NP-PGP.Ind13to21-Dec14 |
Zhang Lab |
100+6 |
2,946,977,000
|
110112 |
HL086 |
S2 |
NP-PGP.Ind13to21-Dec14 |
Zhang Lab |
100+6 |
3,142,124,000
|
110112 |
HL086 |
S3 |
NP-PGP.Ind13to21-Dec14 |
Zhang Lab |
100+6 |
3,043,874,000
|
110112 |
HL086 |
S4 |
NP-PGP.Ind13to21-Dec14 |
Zhang Lab |
100+6 |
3,134,949,000
|
110112 |
HL086 |
S5 |
NP-PGP.Ind13to21-Dec14 |
Zhang Lab |
100+6 |
3,031,047,000
|
110112 |
HL086 |
S6 |
NP-TumorJHU.Ind1to48-Dec18 |
Zhang Lab |
100+6 |
3,476,486,000
|
110112 |
HL086 |
S7 |
NP-AfricanUPenn.Ind1to48-Jan3 |
Zhang Lab |
100+6 |
3,599,069,000
|
110112 |
HL086 |
S8 |
NP-AfricanUPenn.Ind1to48-Jan3 |
Zhang Lab |
100+6 |
3,505,520,000
|
2010
Jul-Dec
Date
|
Run
|
Lane
|
Tube Label
|
Seq facility
|
Read length
|
# filtered reads (bps)
|
101209 |
HL085 |
S1 |
AL-Exome-aMSC_p7-Dec7 |
Zhang Lab |
80+7+80 |
2,801,366,000
|
101209 |
HL085 |
S2 |
AL-Exome-MSC_iPS4_p14-Dec7 |
Zhang Lab |
80+7+80 |
2,963,206,000
|
101209 |
HL085 |
S3 |
AL-Exome-MSC_iPS8_p14-Dec7 |
Zhang Lab |
80+7+80 |
3,149,351,000
|
101209 |
HL085 |
S4 |
AL-Exome-KiPS3F7_p29-Dec7 |
Zhang Lab |
80+7+80 |
2,935,861,000
|
101209 |
HL085 |
S5 |
NP-Mm-IMR90-Nov23 |
Zhang Lab |
80+7+80 |
2,590,543,000
|
101209 |
HL085 |
S6 |
NP-Mm-IMR90-Nov23 |
Zhang Lab |
80+7+80 |
2,572,362,000
|
101209 |
HL085 |
S7 |
NP-Mm-IMR90-Nov23 |
Zhang Lab |
80+7+80 |
2,587,222,000
|
101209 |
HL085 |
S8 |
KZ-Lancelet_3_Lib-Sep10 |
Zhang Lab |
80+7+80 |
2,103,198,000
|
101203 |
HL084 |
S1 |
AL-Exome-Olf_MSC-Nov30_Nextera |
Zhang Lab |
80 |
2,832,310,000
|
101203 |
HL084 |
S2 |
AL-Exome-Olf_MSC-Nov30_Nextera |
Zhang Lab |
80 |
2,848,472,000
|
101203 |
HL084 |
S3 |
AL-Exome-Olf_CD34+-Nov30_Nextera |
Zhang Lab |
80 |
2,484,395,000
|
101203 |
HL084 |
S4 |
AL-Exome-Olf_CD34+-Nov30_Nextera |
Zhang Lab |
80 |
2,506,430,000
|
101203 |
HL084 |
S5 |
AL-Exome-KiPS-Nov30_Nextera |
Zhang Lab |
80 |
2,774,503,000
|
101203 |
HL084 |
S6 |
AL-Exome-KiPS-Nov30_Nextera |
Zhang Lab |
80 |
2,827,796,000
|
101203 |
HL084 |
S7 |
AL-Exome-KiPS_CD34+-Nov30_Nextera |
Zhang Lab |
80 |
2,686,185,000
|
101203 |
HL084 |
S8 |
AL-Exome-KiPS_CD34+-Nov30_Nextera |
Zhang Lab |
80 |
2,625,599,000
|
101123 |
HL083 |
S1 |
AL-Exome-FiPS_4F5_P15-Nov22 |
Zhang Lab |
80+7+80 |
2,866,535,000
|
101123 |
HL083 |
S2 |
AL-Exome-FiPS_4F5_P44-Nov22 |
Zhang Lab |
80+7+80 |
2,786,330,000
|
101123 |
HL083 |
S3 |
AL-Exome-Plvthm_Rb4_D_P10-Nov12 |
Zhang Lab |
80+7+80 |
2,663,488,000
|
101123 |
HL083 |
S4 |
HC-MDA-Ecoli-SAGs(Ind1to8)-Nov15 |
Zhang Lab |
80+7+80 |
2,809,612,000
|
101123 |
HL083 |
S5 |
AL-Exome-HFF_P5-Nov22 |
Zhang Lab |
80+7+80 |
3,075,773,000
|
101123 |
HL083 |
S6 |
AL-Exome-38H1C_6_P10-Nov22 |
Zhang Lab |
80+7+80 |
2,680,754,000
|
101123 |
HL083 |
S7 |
NP-SAG-MouseGutSetb-Nov4 |
Zhang Lab |
80+7+80 |
3,067,120,000
|
101123 |
HL083 |
S8 |
UCSD-BB-TM_Solexa1-Oct28 |
Zhang Lab |
80+7+80 |
1,836,366,000
|
101117 |
HL082 |
S1 |
AL-Exome-FiPS_4F2_P9-Nov12 |
Zhang Lab |
80 |
2,320,956,000
|
101117 |
HL082 |
S2 |
AL-Exome-FiPS_4F2_P9-Nov12 |
Zhang Lab |
80 |
2,404,301,000
|
101117 |
HL082 |
S3 |
AL-Exome-FiPS_4F2_P40-Nov12 |
Zhang Lab |
80 |
2,422,202,000
|
101117 |
HL082 |
S4 |
AL-Exome-FiPS_4F2_P40-Nov12 |
Zhang Lab |
80 |
2,425,803,000
|
101117 |
HL082 |
S5 |
AL-Exome-Plvthm_Rb4_5_P10-Nov12 |
Zhang Lab |
80 |
2,451,276,000
|
101117 |
HL082 |
S6 |
AL-Exome-Plvthm_Rb4_5_P10-Nov12 |
Zhang Lab |
80 |
2,459,732,000
|
101117 |
HL082 |
S7 |
AL-Exome-IMR90_P4-Nov12 |
Zhang Lab |
80 |
2,549,279,000
|
101117 |
HL082 |
S8 |
AL-Exome-IMR90_P4-Nov12 |
Zhang Lab |
80 |
2,470,636,000
|
101108 |
HL081 |
S1 |
KZ-Lancelet_3_Lib-Sep10 |
Zhang Lab |
80+7+80 |
2,345,534,000
|
101108 |
HL081 |
S2 |
KZ-Lancelet_3_Lib-Sep10 |
Zhang Lab |
80+7+80 |
2,413,314,000
|
101108 |
HL081 |
S3 |
KZ-Lancelet_3_Lib-Sep10 |
Zhang Lab |
80+7+80 |
2,407,128,000
|
101108 |
HL081 |
S4 |
KZ-Lancelet_3_Lib-Sep10 |
Zhang Lab |
80+7+80 |
2,413,251,000
|
101108 |
HL081 |
S5 |
KZ-Lancelet_3_Lib-Sep10 |
Zhang Lab |
80+7+80 |
2,409,447,000
|
101108 |
HL081 |
S6 |
NP-SAG-MouseGutSetA.Ind1-12-Oct28 |
Zhang Lab |
80+7+80 |
3,044,539,000
|
101108 |
HL081 |
S7 |
NP-SAG-MouseGutSetA.Ind1-12-Oct28 |
Zhang Lab |
80+7+80 |
3,008,164,000
|
101108 |
HL081 |
S8 |
NP-SAG-MouseGutSetA.Ind1-12-Oct28 |
Zhang Lab |
80+7+80 |
2,928,597,000
|
101030 |
HL080 |
S1 |
DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23 |
Zhang Lab |
80+7+80 |
1,295,516,000
|
101030 |
HL080 |
S2 |
NP-SAG-MouseGutSetA.Ind1-12-Oct28 |
Zhang Lab |
80+7+80 |
1,677,814,000
|
101030 |
HL080 |
S3 |
UCSD-BB-TM_Solexa1-Oct28 |
Zhang Lab |
80+7+80 |
1,168,578,000
|
101030 |
HL080 |
S4 |
KZ-Lancelet_6_Lib-Se10 |
Zhang Lab |
80+7+80 |
143,044,000
|
101030 |
HL080 |
S5 |
KZ-Lancelet_6_Lib-Se10 |
Zhang Lab |
80+7+80 |
142,647,000
|
101030 |
HL080 |
S6 |
KZ-Lancelet_6_Lib-Se10 |
Zhang Lab |
80+7+80 |
152,233,000
|
101030 |
HL080 |
S7 |
KZ-Lancelet_6_Lib-Se10 |
Zhang Lab |
80+7+80 |
148,587,000
|
101030 |
HL080 |
S8 |
KZ-Lancelet_3_Lib-Sep10 |
Zhang Lab |
80+7+80 |
1,934,932,000
|
101026 |
HL079 |
S1 |
AL-Exome-MMTA-Jun29-Belmonte1 |
Zhang Lab |
80+7 |
1,377,624,000
|
101026 |
HL079 |
S2 |
AL-Exome-MMTA-Jun29-Belmonte1 |
Zhang Lab |
80+7 |
1,217,203,000
|
101026 |
HL079 |
S3 |
JG-PGP1-Chr-Lib-Oct22 |
Zhang Lab |
80+7 |
474,667,000
|
101026 |
HL079 |
S4 |
DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23 |
Zhang Lab |
80+7 |
1,428,659,000
|
101026 |
HL079 |
S5 |
DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23 |
Zhang Lab |
80+7 |
1,191,736,000
|
101026 |
HL079 |
S6 |
DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23 |
Zhang Lab |
80+7 |
1,956,053,000
|
101026 |
HL079 |
S7 |
DD-BSPP-DMR220K_N2_VarInd1_10-Sep23+10% PhiX |
Zhang Lab |
80+7 |
1,978,414,000
|
101026 |
HL079 |
S8 |
DD-BSPP-DMR220K_N2_VarInd1_10-Sep23+10% PhiX |
Zhang Lab |
80+7 |
1,924,357,000
|
101021 |
HL078 |
S1 |
AL-Exome-hNSC-Aug14-Belmonte |
Zhang Lab |
80+7 |
|
101021 |
HL078 |
S2 |
AL-Exome-hNSC-Aug14-Belmonte |
Zhang Lab |
80+7 |
|
101021 |
HL078 |
S3 |
AL-Exome-NiPS2F-Aug14-Belmonte |
Zhang Lab |
80+7 |
|
101021 |
HL078 |
S4 |
AL-Exome-NiPS2F-Aug14-Belmonte |
Zhang Lab |
80+7 |
|
101021 |
HL078 |
S5 |
DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23 |
Zhang Lab |
80+7 |
|
101021 |
HL078 |
S6 |
DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23 |
Zhang Lab |
80+7 |
|
101021 |
HL078 |
S7 |
DD-BSPP-DMR220K_N2_VarInd1_10-Sep23+10% PhiX |
Zhang Lab |
80+7 |
|
101021 |
HL078 |
S8 |
DD-BSPP-DMR220K_N2_VarInd1_10-Sep23+10% PhiX |
Zhang Lab |
80+7 |
|
101016 |
HL077 |
S1 |
AL-Exome-AST-Oct4 |
Zhang Lab |
80+7 |
1,913,314,000
|
101016 |
HL077 |
S2 |
AL-Exome-AST-Oct4 |
Zhang Lab |
80+7 |
1,977,248,000
|
101016 |
HL077 |
S3 |
AL-Exome-ASTiPS4F_4-Oct4 |
Zhang Lab |
80+7 |
2,205,330,000
|
101016 |
HL077 |
S4 |
AL-Exome-ASTiPS4F_4-Oct4 |
Zhang Lab |
80+7 |
2,146,837,000
|
101016 |
HL077 |
S5 |
AL-Exome-ASTiPS4F_5-Oct4 |
Zhang Lab |
80+7 |
2,449,641,000
|
101016 |
HL077 |
S6 |
AL-Exome-ASTiPS4F_5-Oct4 |
Zhang Lab |
80+7 |
2,504,974,000
|
101016 |
HL077 |
S7 |
AL-Exome-HUViPS4F1-Aug14-Belmonte |
Zhang Lab |
80+7 |
1,664,126,000
|
101016 |
HL077 |
S8 |
DD-DMR220K-BJiPS_Rebalanced-Sep23 |
Zhang Lab |
80+7 |
1,909,981,000
|
101012 |
AL009 |
S1 |
AG-Exome-OAT_F-Oct12 |
Zhang Lab |
80 |
2,119,404,000
|
101012 |
AL009 |
S2 |
AG-Exome-OAT_12-Oct12 |
Zhang Lab |
80 |
2,093,540,000
|
101012 |
AL009 |
S3 |
AG-Exome-OAT_12.4-Oct12 |
Zhang Lab |
80 |
1,901,899,000
|
101012 |
AL009 |
S4 |
AG-Exome-OAT_12.4.2-Oct12 |
Zhang Lab |
80 |
1,948,886,000
|
101012 |
AL009 |
S5 |
AG-Exome-B4-Oct12 |
Zhang Lab |
80 |
1,846,700,000
|
101012 |
AL009 |
S6 |
AG-Exome-1034I-Oct12 |
Zhang Lab |
80 |
1,964,239,000
|
101012 |
AL009 |
S7 |
AG-Exome-1000F-Oct12 |
Zhang Lab |
80 |
1,940,870,000
|
101012 |
AL009 |
S8 |
AG-Exome-1000I-Oct12 |
Zhang Lab |
80 |
2,028,039,000
|
101008 |
DD003 |
S1 |
AG-Exome-OAT_F-Oct12 |
Zhang Lab |
80 |
1,219,289,000
|
101008 |
DD003 |
S2 |
AG-Exome-OAT_12-Oct12 |
Zhang Lab |
80 |
1,620,779,000
|
101008 |
DD003 |
S3 |
AG-Exome-OAT_12.4-Oct12 |
Zhang Lab |
80 |
1,526,898,000
|
101008 |
DD003 |
S4 |
AG-Exome-OAT_12.4.2-Oct12 |
Zhang Lab |
80 |
1,713,981,000
|
101008 |
DD003 |
S5 |
AG-Exome-B4-Oct12 |
Zhang Lab |
80 |
1,546,025,000
|
101008 |
DD003 |
S6 |
AG-Exome-1034I-Oct12 |
Zhang Lab |
80 |
1,546,654,000
|
101008 |
DD003 |
S7 |
AG-Exome-1000F-Oct12 |
Zhang Lab |
80 |
1,634,594,000
|
101008 |
DD003 |
S8 |
AG-Exome-1000I-Oct12 |
Zhang Lab |
80 |
2,013,521,000
|
101006 |
HL075 |
S1 |
HMS-C2U-12Plex-Sep29 |
Zhang Lab |
36+6 |
849,634,000
|
101006 |
HL075 |
S2 |
HMS-C2U-12Plex-Sep29 |
Zhang Lab |
36+6 |
877,326,000
|
101006 |
HL075 |
S3 |
HMS-C2U-12Plex-Sep29 |
Zhang Lab |
36+6 |
881,302,000
|
101006 |
HL075 |
S4 |
HMS-C2U-12Plex-Sep29 |
Zhang Lab |
36+6 |
866,372,000
|
101006 |
HL075 |
S5 |
HMS-C2U-12Plex-Sep29 |
Zhang Lab |
36+6 |
845,377,000
|
101006 |
HL075 |
S6 |
HMS-C2U-12Plex-Sep29 |
Zhang Lab |
36+6 |
825,983,000
|
101006 |
HL075 |
S7 |
HMS-C2U-12Plex-Sep29 |
Zhang Lab |
36+6 |
865,950,000
|
101006 |
HL076 |
S8 |
HMS-C2U-12Plex-Sep29 |
Zhang Lab |
36+6 |
849,742,000
|
100925 |
HL075 |
S1 |
KZ-Lancelet_3_Lib-Sep10 |
Zhang Lab |
80+80+7 |
1,391,455,000
|
100925 |
HL075 |
S2 |
KZ-Lancelet_3_Lib-Sep10 |
Zhang Lab |
80+80+7 |
1,483,815,000
|
100925 |
HL075 |
S3 |
KZ-Lancelet_3_Lib-Sep10 |
Zhang Lab |
80+80+7 |
1,433,906,000
|
100925 |
HL075 |
S4 |
KZ-Lancelet_3_Lib-Sep10 |
Zhang Lab |
80+80+7 |
1,163,263,000
|
100925 |
HL075 |
S5 |
KZ-Lancelet_6_Lib-Se10 |
Zhang Lab |
80+80+7 |
1,951,079,000
|
100925 |
HL075 |
S6 |
KZ-Lancelet_6_Lib-Se10 |
Zhang Lab |
80+80+7 |
2,373,404,000
|
100925 |
HL075 |
S7 |
DD-BSPP-DMR220K_N2_VarInd1_10-Sep23+10% PhiX |
Zhang Lab |
80+80+7 |
2,057,108,000
|
100925 |
HL075 |
S8 |
DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23 |
Zhang Lab |
80+80+7 |
2,212,734,000
|
100921 |
HL074 |
S1 |
AL-Exome-iPS16-1-Sep17 |
Zhang Lab |
80 |
1,472,681,000
|
100921 |
HL074 |
S2 |
Al-Exome-iPS16-4-Sep17 |
Zhang Lab |
80 |
1,495,036,000
|
100921 |
HL074 |
S3 |
AL-Exome-PGP1.2_iPS#2_P38-Sep17 |
Zhang Lab |
80 |
1,867,962,000
|
100921 |
HL074 |
S4 |
AL-Exome-dH1_cf16-Sep17 |
Zhang Lab |
80 |
1,456,431,000
|
100921 |
HL074 |
S5 |
AL-Exome-NiPS2F-Aug14-Belmonte |
Zhang Lab |
80 |
1,062,524,000
|
100921 |
HL074 |
S6 |
AL-Exome-HUViPS4F3-Aug14-Belmonte |
Zhang Lab |
80 |
1,174,766,000
|
100921 |
HL074 |
S7 |
AL-Exome-HUViPS4F1-Aug14-Belmonte |
Zhang Lab |
80 |
609,446,000
|
100921 |
HL074 |
S8 |
AL-Exome-Huvec-Aug14-Belmonte |
Zhang Lab |
80 |
1,276,503,000
|
100917 |
HL073 |
S1 |
AL-Exome-iPS16-1-Sep17 |
Zhang Lab |
80 |
742,023,000
|
100917 |
HL073 |
S2 |
AL-Exome-iPS16-1-Sep17 |
Zhang Lab |
80 |
789,931,000
|
100917 |
HL073 |
S3 |
Al-Exome-iPS16-4-Sep17 |
Zhang Lab |
80 |
850,349,000
|
100917 |
HL073 |
S4 |
Al-Exome-iPS16-4-Sep17 |
Zhang Lab |
80 |
855,557,000
|
100917 |
HL073 |
S5 |
AL-Exome-PGP1.2_iPS#2_P38-Sep17 |
Zhang Lab |
80 |
831,524,000
|
100917 |
HL073 |
S6 |
AL-Exome-PGP1.2_iPS#2_P38-Sep17 |
Zhang Lab |
80 |
726,195,000
|
100917 |
HL073 |
S7 |
AL-Exome-dH1_cf16-Sep17 |
Zhang Lab |
80 |
707,288,000
|
100917 |
HL073 |
S8 |
AL-Exome-dH1_cf16-Sep17 |
Zhang Lab |
80 |
755,538,000
|
100813 |
HL072 |
S1 |
KZ-GM20431 HSCHR LIB-Sep10 |
Zhang Lab |
60+7 |
651,630,000
|
100813 |
HL072 |
S2 |
KZ-GM20431 HSCHR LIB-Sep10 |
Zhang Lab |
60+7 |
694,169,000
|
100813 |
HL072 |
S3 |
KZ-Lancelet_3_Lib-Sep10 |
Zhang Lab |
60+7 |
658,430,000
|
100813 |
HL072 |
S4 |
KZ-Lancelet_3_Lib-Sep10 |
Zhang Lab |
60+7 |
646,324,000
|
100813 |
HL072 |
S5 |
KZ-Lancelet_6_Lib-Se10 |
Zhang Lab |
60+7 |
700,011,000
|
100813 |
HL072 |
S6 |
KZ-Lancelet_6_Lib-Se10 |
Zhang Lab |
60+7 |
709,104,000
|
100813 |
HL072 |
S7 |
KZ-Lancelet_8_Lib-Sep10 |
Zhang Lab |
60+7 |
0
|
100813 |
HL072 |
S8 |
KZ-Lancelet_8_Lib-Sep10 |
Zhang Lab |
60+7 |
0
|
100824 |
HL071 |
S1 |
HMS-GC-Exome-Exome_pair_3_C-Aug13 |
Zhang Lab |
60+7 |
1,239,473,000
|
100824 |
HL071 |
S2 |
AL-Exome-HUViPS4F3-Aug14-Belmonte |
Zhang Lab |
60+7 |
1,479,578,000
|
100824 |
HL071 |
S3 |
AL-Exome-Huvec-Aug14-Belmonte |
Zhang Lab |
60+7 |
1,420,862,000
|
100824 |
HL071 |
S4 |
AL-Exome-FiPS4F7-Aug14-Belmonte |
Zhang Lab |
60+7 |
1,272,738,000
|
100824 |
HL071 |
S5 |
HL-ASE-gDNA-Aug16 |
Zhang Lab |
60+7 |
1,358,927,000
|
100824 |
HL071 |
S6 |
HL-ASE-gDNA-Aug16 |
Zhang Lab |
60+7 |
1,063,216,000
|
100824 |
HL071 |
S7 |
HL-ASE-cDNA-Aug16 |
Zhang Lab |
60+7 |
1,449,370,000
|
100824 |
HL071 |
S8 |
HL-ASE-cDNA-Aug16 |
Zhang Lab |
60+7 |
1,422,238,000
|
100818 |
HL070 |
S1 |
AL-Exome-NiPS2F-Aug14-Belmonte |
Zhang Lab |
80 |
1,725,932,000
|
100818 |
HL070 |
S2 |
AL-Exome-HUViPS4F3-Aug14-Belmonte |
Zhang Lab |
80 |
1,429,202,000
|
100818 |
HL070 |
S3 |
AL-Exome-HUViPS4F1-Aug14-Belmonte |
Zhang Lab |
80 |
1,511,891,000
|
100818 |
HL070 |
S4 |
AL-Exome-Huvec-Aug14-Belmonte |
Zhang Lab |
80 |
1,361,743,000
|
100818 |
HL070 |
S5 |
AL-Exome-hNSC-Aug14-Belmonte |
Zhang Lab |
80 |
1,419,623,000
|
100818 |
HL070 |
S6 |
AL-Exome-FiPS4F7-Aug14-Belmonte |
Zhang Lab |
80 |
1,257,985,000
|
100818 |
HL070 |
S7 |
HMS-GC-Exome-Exome_pair_6_A-Aug13 |
Zhang Lab |
80 |
1,072,036,000
|
100818 |
HL070 |
S8 |
HMS-GC-Exome-Exome_pair_6_C-Aug13 |
Zhang Lab |
80 |
1,019,104,000
|
100814 |
HL069 |
S1 |
HMS-GC-Exome-Exome_pair_1_A-Aug13 |
Zhang Lab |
60 |
1,218,075,000
|
100814 |
HL069 |
S2 |
HMS-GC-Exome-Exome_pair_1_C-Aug13 |
Zhang Lab |
60 |
1,269,759,000
|
100814 |
HL069 |
S3 |
HMS-GC-Exome-Exome_pair_2_A-Aug13 |
Zhang Lab |
60 |
1,347,416,000
|
100814 |
HL069 |
S4 |
HMS-GC-Exome-Exome_pair_2_C-Aug13 |
Zhang Lab |
60 |
1,282,516,000
|
100814 |
HL069 |
S5 |
HMS-GC-Exome-Exome_pair_3_A-Aug13 |
Zhang Lab |
60 |
1,116,590,000
|
100814 |
HL069 |
S6 |
HMS-GC-Exome-Exome_N6_FL-Aug13 |
Zhang Lab |
60 |
1,232,492,000
|
100814 |
HL069 |
S7 |
HMS-GC-Exome-Exome_N6_Cer-Aug13 |
Zhang Lab |
60 |
1,411,421,000
|
100814 |
HL069 |
S8 |
KZ-B.Jap-1_300bp_Lib-Aug5 |
Zhang Lab |
60 |
0
|
100807 |
HL068 |
S1 |
AL-Genome-CVF-Jul30 |
Zhang Lab |
60+7 |
1,212,756,000
|
100807 |
HL068 |
S2 |
AL-Genome-PGP1ips-Jul30 |
Zhang Lab |
60+7 |
1,755,545,000
|
100807 |
HL068 |
S3 |
AL-Genome-CVIB-Jul30 |
Zhang Lab |
60+7 |
1,301,693,000
|
100807 |
HL068 |
S4 |
DD-BSPP-CpG97K-13066B09-B28 |
Zhang Lab |
60+7 |
1,185,514,000
|
100807 |
HL068 |
S5 |
KZ-ASE-DNA-Jul22 |
Zhang Lab |
60+7 |
875,399,000
|
100807 |
HL068 |
S6 |
KZ-ASE-DNA-Jul22 |
Zhang Lab |
60+7 |
824,990,000
|
100807 |
HL068 |
S7 |
HL-ASE-cDNA-Jul26 |
Zhang Lab |
60+7 |
1,260,545,000
|
100807 |
HL068 |
S8 |
HL-ASE-cDNA-Jul26 |
Zhang Lab |
60+7 |
1,340,234,000
|
100802 |
HL067 |
S1 |
KZ-ASE-DNA-Jul22 |
Zhang Lab |
40 |
0
|
100802 |
HL067 |
S2 |
HL-ASE-cDNA-Jul26 |
Zhang Lab |
40 |
0
|
100802 |
HL067 |
S3 |
HC-MDA-Ecoli_90m_C-Jul30 |
Zhang Lab |
40 |
920,399,000
|
100802 |
HL067 |
S4 |
HC-MDA-Ecoli_10hr_C-Jul30 |
Zhang Lab |
40 |
912,392,000
|
100802 |
HL067 |
S5 |
AL-Exome-CV13-Jul25 |
Zhang Lab |
40 |
1,183,539,000
|
100802 |
HL067 |
S6 |
AL-Genome-PGP1F-Jul30 |
Zhang Lab |
40 |
1,038,403,000
|
|
|
|
AL-Genome-17L_ANK-Jul30 |
|
|
|
100802 |
HL067 |
S7 |
AL-Genome-17L_HK1-Jul30 |
Zhang Lab |
40 |
699,527,000
|
|
|
|
AL-Genome-17L_SLN-Jul30 |
|
|
|
|
|
|
PhiX |
|
|
|
100802 |
HL067 |
S8 |
AL-Genome-PGP1F-Jul30 |
Zhang Lab |
40 |
1,062,689,000
|
100726 |
HL066 |
S1 |
AL-Exome-CV11-Jul25 |
Zhang Lab |
80 |
1,809,265,000
|
100726 |
HL066 |
S2 |
AL-Exome-CV11-Jul25 |
Zhang Lab |
80 |
1,932,617,000
|
100726 |
HL066 |
S3 |
Al-Exome-CV12-Jul25 |
Zhang Lab |
80 |
1,867,404,000
|
100726 |
HL066 |
S4 |
Al-Exome-CV12-Jul25 |
Zhang Lab |
80 |
987,605,000
|
100726 |
HL066 |
S5 |
AL-Exome-CV13-Jul25 |
Zhang Lab |
80 |
303,021,000
|
100726 |
HL066 |
S6 |
AL-Exome-CV13-Jul25 |
Zhang Lab |
80 |
604,097,000
|
100726 |
HL066 |
S7 |
AL-Exome-56JW-Jul25-Vanderbilt |
Zhang Lab |
80 |
616,688,000
|
100726 |
HL066 |
S8 |
AL-Exome-56JW-Jul25-Vanderbilt |
Zhang Lab |
80 |
1,754,710,000
|
100721 |
HL065 |
S1 |
AL-Exome-CF_1.4-Jul10-Daley5 |
Zhang Lab |
80 |
1,456,489,000
|
100721 |
HL065 |
S2 |
DD-BSPP-CpG97K-05215B09-Mar18-B10 |
Zhang Lab |
80 |
1,493,011,000
|
100721 |
HL065 |
S3 |
AL-Exome-FiPS_3F1-Jul20 |
Zhang Lab |
80 |
1,695,531,000
|
100721 |
HL065 |
S4 |
AL-Exome-FiPS_3F1-Jul20 |
Zhang Lab |
80 |
1,701,866,000
|
100721 |
HL065 |
S5 |
AL-Exome-HFFXF-Jul20 |
Zhang Lab |
80 |
1,729,276,000
|
100721 |
HL065 |
S6 |
AL-Exome-HFFXF-Jul20 |
Zhang Lab |
80 |
1,602,218,000
|
100721 |
HL065 |
S7 |
AL-Exome-KiPS_4F8-Jul20 |
Zhang Lab |
80 |
1,592,717,000
|
100721 |
HL065 |
S8 |
AL-Exome-KiPS_4F8-Jul20 |
Zhang Lab |
80 |
1,688,181,000
|
100717 |
HL064 |
S1 |
KZ-BSPP_DMR220K-BJiPS-Jul10 |
Zhang Lab |
80 |
1,542,764,000
|
100717 |
HL064 |
S2 |
AL-Exome-dHiF-Jun25-Daley1 |
Zhang Lab |
80 |
1,488,881,000
|
100717 |
HL064 |
S3 |
DD-BSPP-PGP1iPS_Jun22-CPG97K+30K |
Zhang Lab |
80 |
1,462,284,000
|
100717 |
HL064 |
S4 |
DD-BSPP_CPG97K-PGP1Fib-Jul16 |
Zhang Lab |
80 |
1,189,205,000
|
100717 |
HL064 |
S5 |
DD-BSPP_CPG97K-01192B09-Jul14-B1 |
Zhang Lab |
80 |
1,361,170,000
|
100717 |
HL064 |
S6 |
DD-BSPP_CPG97K-01373A17-Jul14-B3 |
Zhang Lab |
80 |
1,420,433,000
|
100717 |
HL064 |
S7 |
DD-BSPP_CPG97K-01373B09-Jul14-B4 |
Zhang Lab |
80 |
1,352,159,000
|
100717 |
HL064 |
S8 |
DD-BSPP_CPG97K-07292B9-Jul16-BC14 |
Zhang Lab |
80 |
1,489,737,000
|
100713 |
HL063 |
S1 |
AL-Exome-CF_Fib-Jul10-Daley4 |
Zhang Lab |
80 |
1,588,122,000
|
100713 |
HL063 |
S2 |
AL-Exome-CF_Fib-Jul10-Daley4 |
Zhang Lab |
80 |
1,616,900,000
|
100713 |
HL063 |
S3 |
AL-Exome-CF_1.4-Jul10-Daley5 |
Zhang Lab |
80 |
1,644,859,000
|
100713 |
HL063 |
S4 |
AL-Exome-CF_1.4-Jul10-Daley5 |
Zhang Lab |
80 |
1,632,408,000
|
100713 |
HL063 |
S5 |
AL-Exome-CF_1.9-Jul10-Daley6 |
Zhang Lab |
80 |
1,569,908,000
|
100713 |
HL063 |
S6 |
AL-Exome-CF_1.9-Jul10-Daley6 |
Zhang Lab |
80 |
1,573,677,000
|
100713 |
HL063 |
S7 |
AL-Exome-H1_P39-Jul10-Daley7 |
Zhang Lab |
80 |
1,582,703,000
|
100713 |
HL063 |
S8 |
AL-Exome-H1_P39-Jul10-Daley7 |
Zhang Lab |
80 |
1,559,342,000
|
|
|
|
AL-DigiQ-PGP1F_L-Jun14 |
|
|
|
100707 |
HL062 |
S1 |
AL-DigiQ-CVF_L-Jun14 |
Zhang Lab |
40 |
495,632,000
|
|
|
|
PhiX |
|
|
|
|
|
|
AL-DigiQ-PGP1ips-Jun14 |
|
|
|
100707 |
HL062 |
S2 |
AL-DigiQ-CViB-Jun14 |
Zhang Lab |
40 |
557,121,000
|
|
|
|
PhiX |
|
|
|
|
|
|
AL-DigiQ-PGP1F-Jun14 |
Zhang Lab |
|
|
100707 |
HL062 |
S3 |
AL-DigiQ-CVF-Jun14 |
Zhang Lab |
40 |
513,397,000
|
|
|
|
PhiX |
Zhang Lab |
|
|
100707 |
HL062 |
S4 |
AL-DigiQ-Clean-Jul6-PhiX-11_17_29 |
Zhang Lab |
40 |
719,292,000
|
100707 |
HL062 |
S5 |
AL-DigiQ-Fib-Jul6-PhiX-11_17_29 |
Zhang Lab |
40 |
718,808,000
|
100707 |
HL062 |
S6 |
AL-DigiQ-Mutation-Jul6-PhiX-11_17_29 |
Zhang Lab |
40 |
740,698,000
|
100707 |
HL062 |
S7 |
JG-Microbiome-Ecoli1-July2 |
Zhang Lab |
40 |
821,436,000
|
100707 |
HL062 |
S8 |
PhiX |
Zhang Lab |
40 |
604,827,000
|
100703 |
HL061_3 |
S1 |
AL-Exome-DF19.11b-Jul22-Thompson1 |
Zhang Lab |
80 |
1,574,935
|
100703 |
HL061_3 |
S2 |
AL-Exome-DF19.11b-Jul22-Thompson1 |
Zhang Lab |
80 |
1,638,913
|
100703 |
HL061_3 |
S3 |
AL-Exome-ips4.7-Jul22-Thompson2 |
Zhang Lab |
80 |
1,576,439
|
100703 |
HL061_3 |
S4 |
AL-Exome-ips4.7-Jul22-Thompson2 |
Zhang Lab |
80 |
1,556,867
|
100703 |
HL061_3 |
S5 |
Al-Exome-ips_dHiF8-Jun25-Daley2 |
Zhang Lab |
80 |
1,944,840
|
100703 |
HL061_3 |
S6 |
AL-Exome-ips_dHiF9-Jun25-Daley3 |
Zhang Lab |
80 |
1,990,985
|
100703 |
HL061_3 |
S7 |
DD-BSPP-HGPS72iPS_Jul2-CPG97K+30K |
Zhang Lab |
80 |
776,501
|
100703 |
HL061_3 |
S8 |
DD-BSPP-BJiPS_Jul2-CPG97K+30K |
Zhang Lab |
80 |
795,092
|
100701 |
HL061_2 |
S1 |
AL-Exome-DF19.11b-Jun22-Thompson1 |
Zhang Lab |
|
Failed
|
100701 |
HL061_2 |
S2 |
AL-Exome-DF19.11b-Jun22-Thompson1 |
Zhang Lab |
|
Failed
|
100701 |
HL061_2 |
S3 |
AL-Exome-ips4.7-Jun22-Thompson2 |
Zhang Lab |
|
Failed
|
100701 |
HL061_2 |
S4 |
AL-Exome-ips4.7-Jun22-Thompson2 |
Zhang Lab |
|
Failed
|
100701 |
HL061_2 |
S5 |
Al-Exome-ips_dHiF8-Jun25-Daley2 |
Zhang Lab |
|
Failed
|
100701 |
HL061_2 |
S6 |
AL-Exome-ips_dHiF9-Jun25-Daley3 |
Zhang Lab |
|
Failed
|
100701 |
HL061_2 |
S7 |
DD-BSPP-HGPS72iPS_Jun22-CPG97K+30K |
Zhang Lab |
|
Failed
|
100701 |
HL061_2 |
S8 |
DD-BSPP-BJiPS_Jun22-CPG97K+30K |
Zhang Lab |
|
Failed
|
|
Jan-Jun
Date
|
Run
|
Lane
|
Tube Label
|
Seq facility
|
Read length
|
# filtered reads (bps)
|
100630 |
HL061 |
S1 |
AL-Exome-DF19.11b-Jun22-Thompson1 |
Zhang Lab |
|
Failed
|
100630 |
HL061 |
S2 |
AL-Exome-DF19.11b-Jun22-Thompson1 |
Zhang Lab |
|
Failed
|
100630 |
HL061 |
S3 |
AL-Exome-ips4.7-Jun22-Thompson2 |
Zhang Lab |
|
Failed
|
100630 |
HL061 |
S4 |
AL-Exome-ips4.7-Jun22-Thompson2 |
Zhang Lab |
|
Failed
|
100630 |
HL061 |
S5 |
Al-Exome-ips_dHiF8-Jun25-Daley2 |
Zhang Lab |
|
Failed
|
100630 |
HL061 |
S6 |
AL-Exome-ips_dHiF9-Jun25-Daley3 |
Zhang Lab |
|
Failed
|
100630 |
HL061 |
S7 |
DD-BSPP-HGPS72iPS_Jun22-CPG97K+30K |
Zhang Lab |
|
Failed
|
100630 |
HL061 |
S8 |
DD-BSPP-BJiPS_Jun22-CPG97K+30K |
Zhang Lab |
|
Failed
|
100627 |
HL060 |
S1 |
AL-Exome-dHiF-Jun25-Daley1 |
Zhang Lab |
80 |
N/A
|
100627 |
HL060 |
S2 |
AL-Exome-dHiF-Jun25-Daley1 |
Zhang Lab |
80 |
N/A
|
100627 |
HL060 |
S3 |
AL-Exome-DF19.11b-Jun22-Thompson1 |
Zhang Lab |
80 |
N/A
|
100627 |
HL060 |
S4 |
Al-Exome-ips_dHiF8-Jun25-Daley2 |
Zhang Lab |
80 |
N/A
|
100627 |
HL060 |
S5 |
Al-Exome-ips_dHiF8-Jun25-Daley2 |
Zhang Lab |
80 |
N/A
|
100627 |
HL060 |
S6 |
AL-Exome-ips_dHiF9-Jun25-Daley3 |
Zhang Lab |
80 |
N/A
|
100627 |
HL060 |
S7 |
AL-Exome-ips_dHiF9-Jun25-Daley3 |
Zhang Lab |
80 |
N/A
|
100627 |
HL060 |
S8 |
PhiX Control |
Zhang Lab |
80 |
N/A
|
100623 |
HL059 |
S1 |
AL-Exome-DF19.11b-Jun22-Thompson1 |
Zhang Lab |
N/A |
Low Cluster Density
|
100623 |
HL059 |
S2 |
AL-Exome-DF19.11b-Jun22-Thompson1 |
Zhang Lab |
N/A |
Low Cluster Density
|
100623 |
HL059 |
S3 |
AL-Exome-ips4.7-Jun22-Thompson2 |
Zhang Lab |
N/A |
Low Cluster Density
|
100623 |
HL059 |
S4 |
AL-Exome-ips4.7-Jun22-Thompson2 |
Zhang Lab |
N/A |
Low Cluster Density
|
100623 |
HL059 |
S5 |
DD-BSPP-HGPS72iPS_Jun22-CPG97K+30K |
Zhang Lab |
N/A |
Low Cluster Density
|
100623 |
HL059 |
S6 |
DD-BSPP-BJiPS_Jun22-CPG97K+30K |
Zhang Lab |
N/A |
Low Cluster Density
|
100623 |
HL059 |
S7 |
DD-BSPP-PGP1iPS_Jun22-CPG97K+30K |
Zhang Lab |
N/A |
Low Cluster Density
|
100623 |
HL059 |
S8 |
KZ-?-BJ_iPSDMR220K-Jun8 |
Zhang Lab |
N/A |
Low Cluster Density
|
100615 |
HL058_2 |
S1 |
AL-Exome-ips 11b-Eggan-Mar9 |
Zhang Lab |
60 |
|
100615 |
HL058_2 |
|
AL-DigiQ-PGP1F_L-Jun14 |
|
|
|
100615 |
HL058_2 |
S2 |
AL-DigiQ-CVF_L-Jun14 |
Zhang Lab |
60 |
Low Cluster Density
|
100615 |
HL058_2 |
|
PhiX |
|
|
|
100615 |
HL058_2 |
S3 |
AL-exome-hFib 17-Eggan-Mar9 |
Zhang Lab |
60 |
|
100615 |
HL058_2 |
|
AL-DigiQ-PGP1ips-Jun14 |
|
|
|
100615 |
HL058_2 |
S4 |
AL-DigiQ-CViB-Jun14 |
Zhang Lab |
60 |
Low Cluster Density
|
100615 |
HL058_2 |
|
PhiX |
|
|
|
100615 |
HL058_2 |
S5 |
AL-Exome-hFib29-Eggan-Mar9 |
Zhang Lab |
60 |
|
100615 |
HL058_2 |
S6 |
AL-Exome-29A_Eggan-Mar17 |
Zhang Lab |
60 |
|
100615 |
HL058_2 |
|
AL-DigiQ-PGP1F-Jun14 |
|
|
|
100615 |
HL058_2 |
S7 |
AL-DigiQ-CVF-Jun14 |
Zhang Lab |
60 |
Low Cluster Density
|
100615 |
HL058_2 |
|
PhiX |
|
|
|
100615 |
HL058_2 |
S8 |
AL-Exome-ips 29e-Eggan-Mar9 |
Zhang Lab |
60 |
|
100612 |
HL058 |
S1 |
AL-Exome-ips 11b-Eggan-Mar9 |
Zhang Lab |
|
|
|
|
|
AL-DigiQ-PGP1F_L-Jun11 |
|
|
|
100612 |
HL058 |
S2 |
AL-DigiQ-CVF_L-Jun11 |
Zhang Lab |
|
Low Cluster Density
|
|
|
|
PhiX |
|
|
|
100612 |
HL058 |
S3 |
AL-exome-hFib 17-Eggan-Mar9 |
Zhang Lab |
|
|
|
|
|
AL-DigiQ-PGP1ips-Jun11 |
|
|
|
100612 |
HL058 |
S4 |
AL-DigiQ-CViB-Jun11 |
Zhang Lab |
|
Low Cluster Density
|
|
|
|
PhiX |
|
|
|
100612 |
HL058 |
S5 |
AL-Exome-hFib29-Eggan-Mar9 |
Zhang Lab |
|
|
100612 |
HL058 |
S6 |
AL-Exome-29A_Eggan-Mar17 |
Zhang Lab |
|
|
|
|
|
AL-DigiQ-PGP1F-Jun11 |
|
|
|
100612 |
HL058 |
S7 |
AL-DigiQ-CVF-Jun11 |
Zhang Lab |
|
Low Cluster Density
|
|
|
|
PhiX |
|
|
|
100612 |
HL058 |
S8 |
AL-Exome-ips 29e-Eggan-Mar9 |
Zhang Lab |
|
|
100606 |
VCU |
S1 |
AL-Exome-134GA-May3-Vanderbilt |
VCU |
80 |
|
100606 |
VCU |
S2 |
AL-Exome-134GA-May3-Vanderbilt |
VCU |
80 |
|
100606 |
VCU |
S3 |
AL-Exome-134LM-May3-Vanderbilt |
VCU |
80 |
|
100606 |
VCU |
S4 |
AL-Exome-134LM-May3-Vanderbilt |
VCU |
80 |
|
100606 |
VCU |
S5 |
Al-Exome-121DB-May3-Vanderbilt |
VCU |
80 |
|
100606 |
VCU |
S6 |
Al-Exome-121DB-May3-Vanderbilt |
VCU |
80 |
|
100606 |
VCU |
S7 |
AL-Exome-56JW-May3-Vanderbilt |
VCU |
80 |
|
100606 |
VCU |
S8 |
AL-Exome-56JW-May3-Vanderbilt |
VCU |
80 |
|
100605 |
HL057 |
S1 |
VCU-Gao-GY2-May25 |
Zhang Lab |
60 |
|
100605 |
HL057 |
S2 |
VCU-Gao-GY3-May25 |
Zhang Lab |
60 |
|
100605 |
HL057 |
S3 |
VCU-Gao-GY4-May25 |
Zhang Lab |
60 |
|
100605 |
HL057 |
S4 |
VCU-Gao-GY5-May25 |
Zhang Lab |
60 |
|
100605 |
HL057 |
S5 |
VCU-Gao-GY6-May25 |
Zhang Lab |
60 |
|
100605 |
HL057 |
S6 |
VCU-Gao-GY7-May25 |
Zhang Lab |
60 |
|
100605 |
HL057 |
S7 |
VCU-Gao-GY8-May25 |
Zhang Lab |
60 |
|
100605 |
HL057 |
S8 |
PhiX |
Zhang Lab |
60 |
|
100601 |
HL056 |
S1 |
Al-Exome-121BP-May3-Vanderbilt |
Zhang Lab |
80 |
2,295,676,000
|
100601 |
HL056 |
S2 |
Al-Exome-139TS-May3-Vanderbilt |
Zhang Lab |
80 |
2,389,689,000
|
100601 |
HL056 |
S3 |
AL-Exome-56JW-May3-Vanderbilt |
Zhang Lab |
80 |
2,003,056,000
|
100601 |
HL056 |
S4 |
Al-Exome-121DB-May3-Vanderbilt |
Zhang Lab |
80 |
2,294,729,000
|
100601 |
HL056 |
S5 |
Al-Exome-56WW-May3-Vanderbilt |
Zhang Lab |
80 |
2,028,859,000
|
100601 |
HL056 |
S6 |
AL-Exome-139TD-May3-Vanderbilt |
Zhang Lab |
80 |
1,991,602,000
|
100601 |
HL056 |
S7 |
AL-Exome-125GA-May3-Vanderbilt |
Zhang Lab |
80 |
2,138,804,000
|
100601 |
HL056 |
S8 |
Al-Exome-125DC-May3-Vanderbilt |
Zhang Lab |
80 |
2,014,180,000
|
100523 |
HL055 |
S1 |
Al-Exome-121BP-May3-Vanderbilt |
Zhang Lab |
80X2 |
2,064,140,000
|
100523 |
HL055 |
S2 |
Al-Exome-139TS-May3-Vanderbilt |
Zhang Lab |
80X2 |
2,146,818,000
|
100523 |
HL055 |
S3 |
AL-Exome-56JW-May3-Vanderbilt |
Zhang Lab |
80X2 |
1,757,982,000
|
100523 |
HL055 |
S4 |
Al-Exome-121DB-May3-Vanderbilt |
Zhang Lab |
80X2 |
2,009,833,000
|
100523 |
HL055 |
S5 |
Al-Exome-56WW-May3-Vanderbilt |
Zhang Lab |
80X2 |
1,965,460,000
|
100523 |
HL055 |
S6 |
AL-Exome-139TD-May3-Vanderbilt |
Zhang Lab |
80X2 |
1,957,803,000
|
100523 |
HL055 |
S7 |
AL-Exome-125GA-May3-Vanderbilt |
Zhang Lab |
80X2 |
1,977,461,000
|
100523 |
HL055 |
S8 |
Al-Exome-125DC-May3-Vanderbilt |
Zhang Lab |
80X2 |
1,896,028,000
|
100514 |
HL054 |
S1 |
Al-Exome-121BP-May3-Vanderbilt |
Zhang Lab |
80X2 |
2,055,502,000
|
100514 |
HL054 |
S2 |
Al-Exome-139TS-May3-Vanderbilt |
Zhang Lab |
80X2 |
2,109,831,000
|
100514 |
HL054 |
S3 |
AL-Exome-134GA-May3-Vanderbilt |
Zhang Lab |
80X2 |
2,115,594,000
|
100514 |
HL054 |
S4 |
AL-Exome-134LM-May3-Vanderbilt |
Zhang Lab |
80X2 |
2,145,899,000
|
100514 |
HL054 |
S5 |
Al-Exome-56WW-May3-Vanderbilt |
Zhang Lab |
80X2 |
2,071,626,000
|
100514 |
HL054 |
S6 |
AL-Exome-139TD-May3-Vanderbilt |
Zhang Lab |
80X2 |
1,959,635,000
|
100514 |
HL054 |
S7 |
AL-Exome-125GA-May3-Vanderbilt |
Zhang Lab |
80X2 |
1,985,925,000
|
100514 |
HL054 |
S8 |
Al-Exome-125DC-May3-Vanderbilt |
Zhang Lab |
80X2 |
1,973,832,000
|
100503 |
HL053 |
S1 |
AL-Exome-CViB-Apr23 |
Zhang Lab |
80X2 |
1,948,897,000
|
100503 |
HL053 |
S2 |
AL-Exome-CViF-Apr25 |
Zhang Lab |
80X2 |
2,076,896,000
|
100503 |
HL053 |
S3 |
AL-Exome-DF-Apr23 |
Zhang Lab |
80X2 |
2,335,032,000
|
100503 |
HL053 |
S4 |
AL-Exome-FS-Apr23 |
Zhang Lab |
80X2 |
2,433,140,000
|
100503 |
HL053 |
S5 |
AL-Exome-hFib11-apr23 |
Zhang Lab |
80X2 |
2,083,124,000
|
100503 |
HL053 |
S6 |
HC-MDA_Mouse_2h_c4-Mar02 |
Zhang Lab |
80X2 |
1,223,678,000
|
100503 |
HL053 |
S7 |
AL-Exome-ips17a-Apr23 |
Zhang Lab |
80X2 |
1,453,812,000
|
100503 |
HL053 |
S8 |
AL-Exome-ips17b-Apr23 |
Zhang Lab |
80X2 |
1,949,271,000
|
100429 |
HL052 |
S1 |
PhiX |
Zhang Lab |
18X2 |
64,904,000
|
100429 |
HL052 |
S2 |
PhiX |
Zhang Lab |
18X2 |
81,369,000
|
100429 |
HL052 |
S3 |
PhiX |
Zhang Lab |
18X2 |
79,289,000
|
100429 |
HL052 |
S4 |
PhiX |
Zhang Lab |
18X2 |
76,562,000
|
100429 |
HL052 |
S5 |
PhiX |
Zhang Lab |
18X2 |
72,647,000
|
100429 |
HL052 |
S6 |
PhiX |
Zhang Lab |
18X2 |
73,558,000
|
100429 |
HL052 |
S7 |
PhiX |
Zhang Lab |
18X2 |
72,909,000
|
100429 |
HL052 |
S8 |
PhiX |
Zhang Lab |
18X2 |
71,652,000
|
100425 |
DD002 |
S1 |
AL-Exome-CV1-Apr22-Nimblegen |
Zhang Lab |
80 |
1,985,894,000
|
100425 |
DD002 |
S2 |
JD-BSPP-Cmm09A-Oct4GFPiPs-Apr8-iPS |
Zhang Lab |
80 |
1,395,971,000
|
100425 |
DD002 |
S3 |
JD-BSPP-Cmm09A-mousePGC-Apr8-PGC |
Zhang Lab |
80 |
1,740,602,000
|
100425 |
DD002 |
S4 |
AL-Exome-CV1-Apr22-Nimbegen |
Zhang Lab |
80 |
1,872,065,000
|
100425 |
DD002 |
S5 |
DD-BSPP-CpG97K-AG01972p18-Apr22-A1 |
Zhang Lab |
80 |
1,314,109,000
|
100425 |
DD002 |
S6 |
DD-BSPP-CpG97K-AG114p8p13-Apr22-A2 |
Zhang Lab |
80 |
1,226,682,000
|
100425 |
DD002 |
S7 |
DD-BSPP-CpG97K-H9-Apr22 |
Zhang Lab |
80 |
1,113,533,000
|
100425 |
DD002 |
S8 |
DD-BSPP-CpG97K-BJp13-Apr22-BJ |
Zhang Lab |
80 |
1,289,198,000
|
100420 |
HL051 |
S1 |
Zymo-M1-Apr16 |
Zhang Lab |
40 |
457,916,000
|
100420 |
HL051 |
S2 |
Zymo-M2-Apr16 |
Zhang Lab |
40 |
436,172,000
|
100420 |
HL051 |
S3 |
Zymo-M3-Apr16 |
Zhang Lab |
40 |
354,544,000
|
100420 |
HL051 |
S4 |
Zymo-M4-Apr16 |
Zhang Lab |
40 |
212,326,000
|
100420 |
HL051 |
S5 |
Zymo-H1-Apr16 |
Zhang Lab |
40 |
558,978,000
|
100420 |
HL051 |
S6 |
Zymo-H2-Apr16 |
Zhang Lab |
40 |
520,089,000
|
|
|
|
HC-MDA_E.Coli_10h_5-Apr19 |
|
|
|
100420 |
HL051 |
S7 |
HC-MDA_E.Coli_10h_6-Apr19 |
Zhang Lab |
40 |
175,344,000
|
|
|
|
PhiX |
|
|
|
100420 |
HL051 |
S8 |
HC-MDA_Mouse_2h_c4-Mar02 |
Zhang Lab |
40 |
124,140,000
|
100415 |
HL050 |
S1 |
AL-Exome-ips 11a-Eggan-Mar9 |
Zhang Lab |
80 |
1,228,095,000
|
100415 |
HL050 |
S2 |
AL-Exome-CV2- Apr12-Nimblegen |
Zhang Lab |
80 |
1,949,162,000
|
100415 |
HL050 |
S3 |
AL-Exome-CV2- Apr12-Nimblegen |
Zhang Lab |
80 |
1,783,540,000
|
100415 |
HL050 |
S4 |
AL-Exome-ips 11a-Eggan-Mar9 |
Zhang Lab |
80 |
1,152,158,000
|
100415 |
HL050 |
S5 |
AL-Exome-CV3-Apr12-Nimblegen |
Zhang Lab |
80 |
1,617,660,000
|
100415 |
HL050 |
S6 |
AL-Exome-CV3-Apr12-Nimblegen |
Zhang Lab |
80 |
1,554,899,000
|
100415 |
HL050 |
S7 |
Al-Exome-CV4-Apr12-Nimblegen |
Zhang Lab |
80 |
1,975,782,000
|
100415 |
HL050 |
S8 |
Al-Exome-CV4-Apr12-Nimblegen |
Zhang Lab |
80 |
1,871,429,000
|
100411 |
HL049_2 |
S1 |
AL-exome-ips 11b-Eggan-Mar9 |
Zhang Lab |
80 |
710,636,000
|
100411 |
HL049_2 |
S2 |
AL-Exome-PGP1F-Mar9-Agilent_Cell_Pellete |
Zhang Lab |
80 |
1,873,431,000
|
100411 |
HL049_2 |
S3 |
AL-Exome-PGP1F-Mar9-Agilent_Cell_Pellete |
Zhang Lab |
80 |
1,631,006,000
|
100411 |
HL049_2 |
S4 |
AL-exome-hFib 17-Eggan-Mar9 |
Zhang Lab |
80 |
2,120,734,000
|
100411 |
HL049_2 |
S5 |
AL-Exome-ips 11a-Eggan-Mar9 |
Zhang Lab |
80 |
608,718,000
|
100411 |
HL049_2 |
S6 |
AL-Exome-ips 11a-Eggan-Mar9 |
Zhang Lab |
80 |
10,092,000
|
100411 |
HL049_2 |
S7 |
AL-Exome-ips 29e-Eggan-Mar9 |
Zhang Lab |
80 |
509,138,000
|
100411 |
HL049_2 |
S8 |
AL-Exome-ips 29e-Eggan-Mar9 |
Zhang Lab |
80 |
1,160,777,000
|
100407 |
DD001 |
S1 |
HMS-GC-Exome-PGP3 |
Zhang Lab |
60 |
633,169,000
|
100407 |
DD001 |
S2 |
MCG-HS-EJ645-Feb26 |
Zhang Lab |
60 |
1,214,095,000
|
100407 |
DD001 |
S3 |
MCG-HS-EJ656-Feb26 |
Zhang Lab |
60 |
321,550,000
|
100407 |
DD001 |
S4 |
HMS-GC-Exome-PGP10 |
Zhang Lab |
60 |
1,294,949,000
|
100407 |
DD001 |
S5 |
DD-BSPP-CpG97K-05215A18-Mar18-B9 |
Zhang Lab |
60 |
956,968,000
|
100407 |
DD001 |
S6 |
DD-BSPP-CpG97K-05215B09-Mar18-B10 |
Zhang Lab |
60 |
259,485,000
|
100407 |
DD001 |
S7 |
DD-BSPP-CpG97K-09351B09-Mar18-B22 |
Zhang Lab |
60 |
856,623,000
|
100407 |
DD001 |
S8 |
DD-BSPP-CpG97K-13066B09-Mar18-B28 |
Zhang Lab |
60 |
229,124,000
|
100401 |
HL048 |
S1 |
AL-Exome-PGP1_iPS_P16-Mar23-Nimblegen |
Zhang Lab |
80 |
2,175,052,000
|
100401 |
HL048 |
S2 |
AL-Exome-PGP1_iPS_P16-Mar23-Nimblegen |
Zhang Lab |
80 |
2,424,503,000
|
100401 |
HL048 |
S3 |
AL-Exome-PGP1F-Mar23-Nimblegen |
Zhang Lab |
80 |
1,872,156,000
|
100401 |
HL048 |
S4 |
AL-Exome-PGP1F-Mar23-Nimblegen |
Zhang Lab |
80 |
1,756,170,000
|
100401 |
HL048 |
S5 |
AL-Exome-hFib29-Eggan-Mar9 |
Zhang Lab |
80 |
2,288,271,000
|
100401 |
HL048 |
S6 |
AL-Exome-hFib29-Eggan-Mar9 |
Zhang Lab |
80 |
2,100,116,000
|
100401 |
HL048 |
S7 |
AL-Exome-29A_Eggan-Mar17 |
Zhang Lab |
80 |
2,132,208,000
|
100401 |
HL048 |
S8 |
AL-Exome-29A_Eggan-Mar17 |
Zhang Lab |
80 |
1,980,027,000
|
100326 |
HL047 |
S1 |
AL-Exome-CViB-Mar23-Nimblegen |
Zhang Lab |
80 |
2,064,171,000
|
100326 |
HL047 |
S2 |
AL-Exome-CViB-Mar23-Nimblegen |
Zhang Lab |
80 |
2,013,502,000
|
100326 |
HL047 |
S3 |
HMS-GC-Exome-PGP9-Feb24 |
Zhang Lab |
80 |
2,298,166,000
|
100326 |
HL047 |
S4 |
HMS-GC-Exome-PGP2 |
Zhang Lab |
80 |
2,627,795,000
|
100326 |
HL047 |
S5 |
HMS-GC-Exome-PGP3 |
Zhang Lab |
80 |
716,842,000
|
100326 |
HL047 |
S6 |
HMS-GC-Exome-PGP3 |
Zhang Lab |
80 |
722,736,000
|
100326 |
HL047 |
S7 |
AL-Exome-CVF-Mar23-Nimblegen |
Zhang Lab |
80 |
2,368,574,000
|
100326 |
HL047 |
S8 |
AL-Exome-CVF-Mar23-Nimblegen |
Zhang Lab |
80 |
2,290,573,000
|
100318 |
HL046_3 |
S1 |
AL-exome-hFib 17-Eggan-Mar9 |
Zhang Lab |
80 |
272,118,000
|
100318 |
HL046_3 |
S2 |
AL-exome-hFib 11-Eggan-Mar9 |
Zhang Lab |
80 |
3,874,000
|
100318 |
HL046_3 |
S3 |
AL-exome-ips 11b-Eggan-Mar9 |
Zhang Lab |
80 |
62,172,000
|
100318 |
HL046_3 |
S4 |
AL-exome-ips 17a-Eggan-Mar9 |
Zhang Lab |
80 |
1,530,000
|
100318 |
HL046_3 |
S5 |
AL-exome-ips 17b-Eggan-Mar9 |
Zhang Lab |
80 |
1,418,802,000
|
100318 |
HL046_3 |
S6 |
AL-Exome-CViB-Feb21-Agilent |
Zhang Lab |
80 |
19,536,000
|
100318 |
HL046_3 |
S7 |
AL-Exome-CViB-Feb21-Agilent |
Zhang Lab |
80 |
70,512,000
|
100318 |
HL046_3 |
S8 |
MCG-HS-EJ657-Feb26 |
Zhang Lab |
80 |
1,633,297,000
|
100312 |
HL045 |
S1 |
AL-exome-hFib 17-Eggan-Mar9 |
Zhang Lab |
80 |
1,506,856,000
|
100312 |
HL045 |
S2 |
HMS-GC-Exome-PGP2 |
Zhang Lab |
80 |
2,253,160,000
|
100312 |
HL045 |
S3 |
HMS-GC-Exome-PGP7-Feb24 |
Zhang Lab |
80 |
2,238,526,000
|
100312 |
HL045 |
S4 |
HMS-GC-Exome-PGP9-Feb24 |
Zhang Lab |
80 |
2,184,078,000
|
100312 |
HL045 |
S5 |
AL-exome-hFib 11-Eggan-Mar9 |
Zhang Lab |
80 |
1,494,615,000
|
100312 |
HL045 |
S6 |
AL-exome-ips 11b-Eggan-Mar9 |
Zhang Lab |
80 |
1,517,718,000
|
100312 |
HL045 |
S7 |
AL-exome-ips 17a-Eggan-Mar9 |
Zhang Lab |
80 |
1,898,132,000
|
100312 |
HL045 |
S8 |
AL-exome-ips 17b-Eggan-Mar9 |
Zhang Lab |
80 |
1,484,276,000
|
100309 |
HL044 |
S1 |
JD-CPG97K-BC_11306A18-Feb25-B25 |
Zhang Lab |
60 |
1,195,725,000
|
100309 |
HL044 |
S2 |
JD-CPG97K-BC_11306B09-Feb25-B26 |
Zhang Lab |
60 |
1,010,595,000
|
100309 |
HL044 |
S3 |
JD-CPG97K-BC_13066A17-Feb25-B27 |
Zhang Lab |
60 |
1,282,911,000
|
100309 |
HL044 |
S4 |
AL-Genome-FS_gDNA-Feb8 |
Zhang Lab |
60 |
299,586,000
|
100309 |
HL044 |
S5 |
JD-CPG97K+30K-BC_01373A17-Jan15-B3 |
Zhang Lab |
60 |
572,821,000
|
100309 |
HL044 |
S6 |
AL-Exome-CViB-Feb21-Agilent |
Zhang Lab |
60 |
43,405,000
|
100309 |
HL044 |
S7 |
AL-DigiQ-CVF_PhiX-Mar3-(Jan29) |
Zhang Lab |
60 |
1,123,888,000
|
100309 |
HL044 |
S8 |
KZ-DigiQ-FS_6N_PhiX-Mar3-(Jan27) |
Zhang Lab |
60 |
490,072,000
|
100305 |
HL043 |
S1 |
AL-Genome-FS_gDNA-Feb8 |
Zhang Lab |
60 |
713,975,000
|
100305 |
HL043 |
S2 |
AL-Genome-FS_gDNA-Feb8 |
Zhang Lab |
60 |
580,915,000
|
100305 |
HL043 |
S3 |
AL-DigiQ-CVF_Feb-Mar3 w/ PhiX |
Zhang Lab |
60 |
1,226,356,000
|
100305 |
HL043 |
S4 |
JD-CPG97K-BC_09351A17-Feb25 -B21 |
Zhang Lab |
60 |
1,070,585,000
|
100305 |
HL043 |
S5 |
JD-CPG97K-BC_09491A17-Feb25-B23 |
Zhang Lab |
60 |
1,089,308,000
|
100305 |
HL043 |
S6 |
JD-CPG97K-BC_09491B09-Feb25-B24 |
Zhang Lab |
60 |
1,072,970,000
|
100305 |
HL043 |
S7 |
AL-Genome-DF_gDNA-Feb8 |
Zhang Lab |
60 |
1,636,622,000
|
100305 |
HL043 |
S8 |
AL-Genome-DF_gDNA-Feb8 |
Zhang Lab |
60 |
1,558,396,000
|
|
|
|
AL-DigiQ-CViB/iF-Jan29 |
|
|
|
100302 |
HL042 |
S1 |
KZ-DigiQ-FS_300BP-Jan27 |
Zhang Lab |
60 |
727,876,000
|
|
|
|
PhiX |
|
|
|
100302 |
HL042 |
S2 |
MCG-HS-EJ644-Feb26 |
Zhang Lab |
60 |
534,189,000
|
100302 |
HL042 |
S3 |
AL-Exome-CViB-Feb21-Agilent |
Zhang Lab |
60 |
535,218,000
|
100302 |
HL042 |
S4 |
JD-cpg97k-Breastcancer_09092B09-Feb25-B16 |
Zhang Lab |
60 |
688,224,000
|
100302 |
HL042 |
S5 |
JD-cpg97k-Breastcancer_09123A17-Feb25-B17 |
Zhang Lab |
60 |
988,402,000
|
100302 |
HL042 |
S6 |
JD-cpg97k-Breastcancer_09123B09-Feb25-B18 |
Zhang Lab |
60 |
1,305,870,000
|
100302 |
HL042 |
S7 |
JD-cpg97k-Breastcancer_09206B09-Feb25-B19 |
Zhang Lab |
60 |
1,139,776,000
|
100302 |
HL042 |
S8 |
JD-cpg97k-Breastcancer_09265B09-Feb25-B20 |
Zhang Lab |
60 |
1,194,327,000
|
100226 |
HL041 |
S1 |
JD-CPG97K-BreastCancer-05359A17_R-Feb17-B11R |
Zhang Lab |
60 |
1,493,888,000
|
|
|
|
AL-DigiQ-CViB/iF-Jan29 |
|
|
|
100226 |
HL041 |
S2 |
KZ-DigiQ-FS_300BP-Jan27 |
Zhang Lab |
60 |
403,356,000
|
|
|
|
PhiX |
|
|
|
100226 |
HL041 |
S3 |
HMS-GC-Exome-PGP7-Feb24 |
Zhang Lab |
60 |
1,646,149,000
|
100226 |
HL041 |
S4 |
HMS-GC-Exome-PGP9-Feb24 |
Zhang Lab |
60 |
1,439,205,000
|
100226 |
HL041 |
S5 |
JD-CPG97K-BreastCancer-05359B09_R-Feb17-B12R |
Zhang Lab |
60 |
1,453,021,000
|
100226 |
HL041 |
S6 |
JD-CPG97K-BreastCancer_07292A17_R-Feb17-B13R |
Zhang Lab |
60 |
1,678,189,000
|
100226 |
HL041 |
S7 |
JD-CPG97K-BreastCancer_07292B09_R-Feb17-B14R |
Zhang Lab |
60 |
1,463,761,000
|
|
|
|
AL-DigiQ-CVF-Jan29 |
|
|
|
100226 |
HL041 |
S8 |
KZ-DigiQ-FS_6N-Jan27 |
Zhang Lab |
60 |
1,575,744,000
|
|
|
|
PhiX |
|
|
|
100219 |
HL040 |
S1 |
UCSD-BO-YC_RNA-Feb17 |
Zhang Lab |
60 |
1,357,018,000
|
|
|
|
AL-DigiQ-CViB/iF-Jan29 |
|
|
|
100219 |
HL040 |
S2 |
KZ-DigiQ-FS_300BP-Jan27 |
Zhang Lab |
60 |
980,963,000
|
|
|
|
PhiX |
|
|
|
100219 |
HL040 |
S3 |
JD-CPG97k+30k-Breast_cancer_01373A17-Jan15-B3 |
Zhang Lab |
60 |
86,039,000
|
100219 |
HL040 |
S4 |
JD-CPG97k+30k-Breast_cancer_01373B09-Jan15-B4 |
Zhang Lab |
60 |
870,182,000
|
100219 |
HL040 |
S5 |
JD-CPG97K-BreastCancer-09075B09-Feb17-15E |
Zhang Lab |
60 |
757,280,000
|
100219 |
HL040 |
S6 |
JD-CPG97K-BreastCancer-09075B09-Feb17-15R |
Zhang Lab |
60 |
1,046,148,000
|
100219 |
HL040 |
S7 |
AL-DigiQ-CVF-Feb17 w/ PhiX |
Zhang Lab |
60 |
993,905,000
|
|
|
|
AL-DigiQ-CVF-Jan29 |
|
|
|
100219 |
HL040 |
S8 |
KZ-DigiQ-FS_6N-Jan27 |
Zhang Lab |
60 |
0
|
|
|
|
PhiX |
|
|
|
100212 |
HL039 |
S1 |
JD-CPGmm9A-CtmESC-Feb10 |
Zhang Lab |
60 |
736,934,000
|
|
|
|
AL-DigiQ-CViB/iF-Jan29 |
|
|
|
100212 |
HL039 |
S2 |
KZ-DigiQ-FS_300BP-Jan27 |
Zhang Lab |
60 |
0
|
|
|
|
PhiX |
|
|
|
100212 |
HL039 |
S3 |
HMS-GC-exome-Nim-GT |
Zhang Lab |
60 |
833,000
|
100212 |
HL039 |
S4 |
HMS-GC-Exome-PGP4 |
Zhang Lab |
60 |
734,357,000
|
100212 |
HL039 |
S5 |
JD-CPG97K-Breastcancer_03170B09-Jan28-B7 |
Zhang Lab |
60 |
1,238,744,000
|
100212 |
HL039 |
S6 |
JD-CPG97K-Breast_Cancer_03259B09-Jan28-B8 |
Zhang Lab |
60 |
1,103,439,000
|
100212 |
HL039 |
S7 |
AL-Exome-CViB-AB_Jan28 |
Zhang Lab |
60 |
0
|
100212 |
HL039 |
S8 |
JD-CPGmm9A-TETmESC-Feb10 |
Zhang Lab |
60 |
1,348,896,000
|
|
Date
|
Probe Set
|
Tube Label
|
Conc. X vol
|
Seq facility
|
Lib. Const.
|
Read Length
|
# filtered reads
|
# mappable reads
|
|
Feb 7 |
HL038 |
Exome |
s1,AL-Exome-CViB-AB-Jan28 |
- |
Zhang Lab |
Alice |
60bp |
2,631,195
|
Feb 7 |
HL038 |
BSPP |
s2,JD-cpg97k-Breastcancer_sample_01373B09-Jan28 |
- |
Zhang Lab |
Jie |
60bp |
28,592,257 |
73%
|
Feb 7 |
HL038 |
BSPP |
s3,JD-cpg97k-Breastcancer_sample_01436B09_Jan28 |
- |
Zhang Lab |
Jie |
60bp |
28,611,301 |
72%
|
Feb 7 |
HL038 |
Exome |
s4,KZ-Exome-CViB-N2-Jan28 |
- |
Zhang Lab |
Kun |
60bp |
22,996,517
|
Feb 7 |
HL038 |
BSPP |
s5,JD-cpg97k-Harvard_sample_M0013.1-Jan28 |
- |
Zhang Lab |
Jie |
60bp |
27,703,912
|
Feb 7 |
HL038 |
BSPP |
s6,JD-cpg97k-Harvard_sample_M0077.3-Jan28 |
- |
Zhang Lab |
Jie |
60bp |
28,515,530
|
Feb 7 |
HL038 |
BSPP |
s7,JD-cpg97k-Harvard_sample_M0124.3-Jan28 |
- |
Zhang Lab |
Jie |
60bp |
27,796,744
|
Feb 7 |
HL038 |
BSPP |
s8,JD-cpg97k-Harvard_sample_M0188.3-Jan28 |
- |
Zhang Lab |
Jie |
60bp |
26,285,658
|
Feb 2 |
HL037 |
BSPP |
s1,JD-B3 |
- |
Zhang Lab |
Alice |
60bp |
329192
|
Feb 2 |
HL037 |
DigiQ |
s2,AL-DigiQ-CVF-Jan29/KZ-DigiQ-FS_6N-Jan27 |
- |
Zhang Lab |
Jie |
60bp |
396995
|
Feb 2 |
HL037 |
Exome |
s3,AL-Exome-DF-Jan26-Nimblegen |
- |
Zhang Lab |
Alice |
60bp |
24111229 |
86%
|
Feb 2 |
HL037 |
BSPP |
s4,KZ-BSPP-B2-N2-Jan28 |
- |
Zhang Lab |
Kun |
60bp |
24816617 |
22%/60%(hg18)
|
Feb 2 |
HL037 |
Exome |
s5,AL-Exome-CViB-AB-Jan28 |
- |
Zhang Lab |
Alice |
60bp |
2627559 |
86%
|
Feb 2 |
HL037 |
Exome |
s6,AL-Exome-CViB-CDE-Jan28 |
- |
Zhang Lab |
Alice |
60bp |
26225044 |
78%
|
Feb 2 |
HL037 |
DigiQ |
s7, AL-DigiQ-CViB-iF-Jan29/KZ-DigiQ-FS_300P-Jan27 |
- |
Zhang Lab |
Alice |
60bp |
461181
|
Feb 2 |
HL037 |
Exome |
s8,AL-Exome-FS-Jan26-Nimblegen |
- |
Zhang Lab |
Alice |
60bp |
20920646 |
90%
|
Jan 27 |
HL036 |
Exome |
s1,AL-Exome-DF-Jan26-Nimblegen |
- |
Zhang Lab |
Alice |
60bp |
29,983,562 |
86.81%
|
Jan 27 |
HL036 |
DigiQ |
s2,AL-DigiQ-CViB/iF-Jan26 |
- |
Zhang Lab |
Alice |
60bp |
884920
|
Jan 27 |
HL036 |
BSPP |
s3,JD-CPG97K-Harvard_Sample_B0134.1-Jan22 |
- |
Zhang Lab |
Jie |
60bp |
17,618,873 |
26%/68%(hg18)
|
Jan 27 |
HL036 |
Exome |
s4,AL-Exome-FS-Jan26-Nimblegen |
- |
Zhang Lab |
Alice |
60bp |
30,430,624 |
89.97%
|
Jan 27 |
HL036 |
BSPP |
s5,JD-CPG97K-Harvard_Sample_B0107.1-Jan22 |
- |
Zhang Lab |
Jie |
60bp |
13,332,549 |
34%/70%(hg18)
|
Jan 27 |
HL036 |
BSPP |
s6,JD-CPG97K-Harvard_Sample_B0108.1-Jan22 |
- |
Zhang Lab |
Jie |
60bp |
15,408,196 |
36%/72%(hg18)
|
Jan 27 |
HL036 |
DigiQ |
s7, AL-DigiQ-CVF-Jan26 |
- |
Zhang Lab |
Alice |
60bp |
failed
|
Jan 27 |
HL036 |
BSPP |
s8,JD-CPG97k+30k-Breast_Cancer_01192B09-Jan15 |
- |
Zhang Lab |
Jie |
60bp |
17,643,295 |
14.5%/62%(hg18)
|
Jan 23 |
HL035 |
Exome |
s2,HMS-GC-Exome-PGP2 |
- |
Zhang Lab |
Alice |
60bp |
28,245,781
|
Jan 23 |
HL035 |
Exome |
s3,HMS-GC-Exome-PGP3 |
- |
Zhang Lab |
Alice |
60bp |
27,995,793
|
Jan 23 |
HL035 |
Exome |
s4,HMS-GC-Exome-PGP3 |
- |
Zhang Lab |
Alice |
60bp |
23,101,612
|
Jan 23 |
HL035 |
BSPP |
s5,JD-CPG97K-HarvardB0047.1-Jan22 |
- |
Zhang Lab |
Jie |
60bp |
10,279,091 |
17%
|
Jan 23 |
HL035 |
BSPP |
s6,JD-CPG97K+30K-HarvardB0060.1-Jan22 |
- |
Zhang Lab |
Jie |
60bp |
12,433,511 |
31%
|
Jan 23 |
HL035 |
BSPP |
s7,JD-CPG97K-HarvardB0070.1-Jan22 |
- |
Zhang Lab |
Jie |
60bp |
14,238,777 |
36%
|
Jan 23 |
HL035 |
Exome |
s8,AL-Exome-PGP7-Jan18 |
- |
Zhang Lab |
Alice |
60bp |
7,225,106
|
Jan 13 |
HL034 |
Exome |
s1,HMS-GC-Exome-PGP5-Oct09 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
15,630,851
|
Jan 13 |
HL034 |
DigiQ |
s2,HMS-GC-Exome-PGP5-Oct09 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
16,208,687
|
Jan 13 |
HL034 |
Exome |
s3,AL-Exome-CViB-Jan14-AB |
- |
Zhang Lab |
Alice |
60bp |
15,754,533
|
Jan 13 |
HL034 |
Ctrl |
s4,AL-Exome-CViB-Jan14-AB |
- |
Zhang Lab |
Alice |
60bp |
15,864,921
|
Jan 13 |
HL034 |
Exome |
s5,AL-Exome-CViB-Jan14-CDE |
- |
Zhang Lab |
Alice |
60bp |
15,761,086
|
Jan 13 |
HL034 |
Exome |
s6,AL-Exome-CViB-Jan14-CDE |
- |
Zhang Lab |
Alice |
60bp |
15,795,450
|
Jan 13 |
HL034 |
BSPP |
s7,JD-cpg97k+30k-BC-01230B09-Jan15 |
- |
Zhang Lab |
Jie |
60bp |
12,246,857 |
26%
|
Jan 13 |
HL034 |
Exome |
s8,HMS-GC-exome-Nim-GT |
- |
Zhang Lab |
Billy/Luhan |
60bp |
7,671,888
|
Jan 13 |
HL033 |
Exome |
s1,HMS-GC-exome-Nim-GT |
- |
Zhang Lab |
Billy/Luhan |
60bp |
9,619,807
|
Jan 13 |
HL033 |
DigiQ |
s2,KZ-DigiQ-DF-Jan11/AL-DigiQ-CVF-Jan12 |
- |
Zhang Lab |
Alice/Kun |
60bp |
5,020,038
|
Jan 13 |
HL033 |
BisExSeq |
s3,HL-BisExon-NA20431 |
- |
Zhang Lab |
Alan |
60bp |
11,363,087 |
75%
|
Jan 13 |
HL033 |
Ctrl |
s4,PhiX |
- |
Zhang Lab |
Illumina |
60bp |
4,589,847
|
Jan 13 |
HL033 |
Exome |
s5,AL-Exome-CViB-Jan12-AB |
- |
Zhang Lab |
Alice |
60bp |
1,647,688(overloaded)
|
Jan 13 |
HL033 |
Exome |
s6,AL-Exome-CViB-Jan12-CDE |
- |
Zhang Lab |
Alice |
60bp |
13,489(overloaded)
|
Jan 13 |
HL033 |
DigiQ |
s7, KZ-DigiQ-FS-Jan11/AL-DigiQ-CViB-Jan12 |
- |
Zhang Lab |
Alice/Kun |
60bp |
5,903,015
|
Jan 13 |
HL033 |
Exome |
s8, AL-Exome-CViB-Jan12-AB |
- |
Zhang Lab |
Kun |
60bp |
978,032(overloaded)
|
Jan 05 |
HL032 |
DigiQ |
s1,AL-DigiQ-CVF-Dec23 |
- |
Zhang Lab |
Alice |
60bp |
14,950,591
|
Jan 05 |
HL032 |
DigiQ |
s2,AL-DigiQ-CViB-Dec23 |
- |
Zhang Lab |
Alice |
60bp |
14,520,807
|
Jan 05 |
HL032 |
DigiQ |
s3,KZ-DigiQ-DF-Jan04 |
- |
Zhang Lab |
Kun |
60bp |
10,753,395
|
Jan 05 |
HL032 |
Ctrl |
s4,PhiX |
- |
Zhang Lab |
Illumina |
60bp |
25,057(bad DNA)
|
Jan 05 |
HL032 |
RRS |
s5,KZ-RRS-CVF1-Nov27 |
- |
Zhang Lab |
Kun |
60bp |
8,295,917
|
Jan 05 |
HL032 |
RRS |
s6,KZ-RRS-CViF1-Nov27 |
- |
Zhang Lab |
Kun |
60bp |
8,810,014
|
Jan 05 |
HL032 |
DigiQ |
s7, KZ-DigiQ-FS-Jan04 |
- |
Zhang Lab |
Kun |
60bp |
10,177,605
|
Jan 05 |
HL032 |
Exome |
s8,HMS-GC-PGP8A-Nov1 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
13,216,056
|
2009
Jul-Dec
Month
|
Date
|
Probe Set
|
Tube label
|
Conc. x vol.
|
Seq facility
|
Lib. Const.
|
Read length
|
# filtered reads
|
# mappable reads
|
Dec 29 |
HL030 |
Exome |
s1,PGP9 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
14,705,217
|
Dec 29 |
HL030 |
Exome |
s2,PGP9 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
14,950,591
|
Dec 29 |
HL030 |
Exome |
s3,PGP9 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
14,832,179
|
Dec 29 |
HL030 |
Exome |
s4,NA12878 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
15,414,631
|
Dec 29 |
HL030 |
Exome |
s5,NA12878 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
15,536,069
|
Dec 29 |
HL030 |
Exome |
s6,NA12878 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
15,767,169
|
Dec 29 |
HL030 |
Hap |
s7, HC-MDA-hCell-Dec17-sam006 |
- |
Zhang Lab |
Sam(12/17/09) |
60bp |
15,094,541
|
Dec 29 |
HL030 |
? |
s8,TM |
- |
Zhang Lab |
Palsson |
60bp |
2,384(Failed)
|
Dec 26 |
AL008 |
Hap |
s1, HC-MDA-hCell-Dec17-sam003 |
- |
Zhang Lab |
Sam(12/17/09) |
60bp |
15,826,724
|
Dec 26 |
AL008 |
Hap |
s2, HC-MDA-hCell-Dec17-sam004 |
- |
Zhang Lab |
Sam(12/17/09) |
60bp |
7,814,019
|
Dec 26 |
AL008 |
Hap |
s3, HC-MDA-hCell-Dec17-sam005 |
- |
Zhang Lab |
Sam(12/17/09) |
60bp |
4,516,674
|
Dec 26 |
AL008 |
DigiQuant |
s4,PCR-CV-iB(w/PhiX) |
- |
Zhang Lab |
Alice |
60bp |
5,625,091
|
Dec 26 |
AL008 |
BSPP |
s5,B2-175bp |
- |
Zhang Lab |
Ida |
60bp |
2,629,431 |
22%
|
Dec 26 |
AL008 |
BSPP |
s6,B2-200bp |
- |
Zhang Lab |
Ida |
60bp |
3,834,872 |
21%
|
Dec 26 |
AL008 |
BSPP |
s7,H2-175bp |
- |
Zhang Lab |
Ida |
60bp |
8,081,341 |
26%
|
Dec 26 |
AL008 |
BSPP |
s8,H2-200bp |
- |
Zhang Lab |
Ida |
60bp |
10,992,765 |
30%
|
Dec 22 |
AL007 |
DigiQuant |
s2,PCR-CV-hiPS-F |
- |
Zhang Lab |
Alice |
60bp |
0(overloaded)
|
Dec 22 |
AL007 |
Exome |
s3,CV-iB-ACE |
- |
Zhang Lab |
Kun |
60bp |
1,235,398
|
Dec 22 |
AL007 |
Exome |
s4,CV-iB-BD |
- |
Zhang Lab |
Kun |
60bp |
642,138
|
Dec 22 |
AL007 |
BSPP |
s5,Har1 |
- |
Zhang Lab |
Ida |
60bp |
6,610,330 |
12%
|
Dec 22 |
AL007 |
BSPP |
s6,Har2 |
- |
Zhang Lab |
Ida |
60bp |
5,347,364 |
20%
|
Dec 22 |
AL007 |
BSPP |
s7,Har3 |
- |
Zhang Lab |
Ida |
60bp |
15,243,209 |
26%
|
Dec 22 |
AL007 |
BSPP |
s8,Har4 |
- |
Zhang Lab |
Ida |
60bp |
14,904,014 |
24%
|
Dec 18 |
AL006 |
DigiQuant |
s2,PCR-CV-hiPS-F(w/phiX) |
- |
Zhang Lab |
Alice |
60bp |
18,527,480
|
Dec 18 |
AL006 |
RRS |
s3,DpnII-CV-Fibroblast1 |
- |
Zhang Lab |
Kun |
60bp |
9,278,480
|
Dec 18 |
AL006 |
RRS |
s4,DpnII-CV-hiPS-F |
- |
Zhang Lab |
Kun |
60bp |
7,530,675
|
Dec 18 |
AL006 |
Exome |
s5,PGP8C |
- |
Zhang Lab |
Billy/Luhan |
60bp |
11,320,511
|
Dec 18 |
AL006 |
Exome |
s6,PGP9 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
7,466,479
|
Dec 18 |
AL006 |
BSPP |
s7,Har9 |
- |
Zhang Lab |
Jie |
60bp |
16,529,111 |
28%
|
Dec 18 |
AL006 |
BSPP |
s8,Har10 |
- |
Zhang Lab |
Jie |
60bp |
15,507,608 |
11%
|
Dec 09 |
HL029 |
Exome |
s1,PGP4, #8-9 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
11,299,862
|
Dec 09 |
HL029 |
Exome |
s2,PGP6, #8-9 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
10,572,824
|
Dec 09 |
HL029 |
Exome |
s3,PGP9 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
9,577,578
|
Dec 09 |
HL029 |
Exome |
s4,PGP10,#8-9 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
13,012,173
|
Dec 09 |
HL029 |
Exome |
s5,CV-hiPS-B |
- |
Zhang Lab |
Alan |
60bp |
16,316,464
|
Dec 09 |
HL029 |
Exome |
s6,CV-hiPS-B |
- |
Zhang Lab |
Alan |
60bp |
17,365,795
|
Dec 09 |
HL029 |
Exome |
s7,CV-hiPS-B |
- |
Zhang Lab |
Alan |
60bp |
16,012,994
|
Dec 09 |
HL029 |
Exome |
s8,CV-hiPS-B |
- |
Zhang Lab |
Alan |
60bp |
1,602,572
|
Dec 06 |
HL028 |
RRS |
s1,Dpn-CV-F2 |
- |
Zhang Lab |
Kun |
60bp |
7,073,505
|
Dec 06 |
HL028 |
RRS |
s2,Dpn-CV-F2 |
- |
Zhang Lab |
Kun |
60bp |
7,060,114
|
Dec 06 |
HL028 |
RRS |
s3,Dpn-CV-iF2 |
- |
Zhang Lab |
Kun |
60bp |
6,001,805
|
Dec 06 |
HL028 |
RRS |
s4,Dpn-CV-iF2 |
- |
Zhang Lab |
Kun |
60bp |
3,264,795
|
Dec 06 |
HL028 |
Exome |
s5,CV-iB (A,C) |
- |
Zhang Lab |
Billy/Luhan |
60bp |
7,511,894
|
Dec 06 |
HL028 |
Exome |
s6,PGP8D |
- |
Zhang Lab |
Billy/Luhan |
60bp |
9,310,623
|
Dec 06 |
HL028 |
Exome |
s7,PGP8E |
- |
Zhang Lab |
Billy/Luhan |
60bp |
11,224,269
|
Dec 06 |
HL028 |
Exome |
s8,PGP8 |
- |
Zhang Lab |
Billy/Luhan |
60bp |
5,999,123
|
Dec 02 |
HL027 |
RRS |
s1,Dpn-CV-iB1 |
- |
Zhang Lab |
Kun |
60bp |
10,747,192
|
Dec 02 |
HL027 |
RRS |
s2,Dpn-CV-iF1 |
- |
Zhang Lab |
Kun |
60bp |
9,030,411
|
Dec 02 |
HL027 |
RRS |
s3,Dpn-CV-F1 |
- |
Zhang Lab |
Kun |
60bp |
9,935,148
|
Dec 02 |
HL027 |
RRS |
s4,CV-iB (A,C) |
- |
Zhang Lab |
Alan |
60bp |
13,456,232
|
Dec 02 |
HL027 |
Exome |
s5,CV-iB (A,C) |
- |
Zhang Lab |
Alan |
60bp |
13,137,026
|
Dec 02 |
HL027 |
Exome |
s6,CV-iB (B,D,E) |
- |
Zhang Lab |
Alan |
60bp |
16,102,120
|
Dec 02 |
HL027 |
Exome |
s7,CV-iB (B,D,E) |
- |
Zhang Lab |
Alan |
60bp |
15,933,168
|
Dec 02 |
HL027 |
Exome |
s8,PGP8a |
- |
Zhang Lab |
Billy/Luhan |
60bp |
11,956,198
|
Nov 27 |
HL026 |
Exome |
s1,CV-fibroblast (Alice) |
- |
Zhang Lab |
Alan |
60bp |
17,121,798
|
Nov 27 |
HL026 |
Exome |
s2,CVF-N(Covaris) |
- |
Zhang Lab |
Alan |
60bp |
12,577,956
|
Nov 27 |
HL026 |
Exome |
s3,CVF-N(Covaris) |
- |
Zhang Lab |
Alan |
60bp |
11,767,869
|
Nov 27 |
HL026 |
Exome |
s4,CVF-N(Covaris) |
- |
Zhang Lab |
Alan |
60bp |
12,212,818
|
Nov 27 |
HL026 |
Exome |
s5,CV-iPS (#1-7) |
- |
Zhang Lab |
Alan |
60bp |
18,413,190
|
Nov 27 |
HL026 |
Exome |
s6,DF6(#1-7) |
- |
Zhang Lab |
Alan |
60bp |
18,035,161
|
Nov 27 |
HL026 |
Exome |
s7,Foreskin(#1-7) |
- |
Zhang Lab |
Alan |
60bp |
17,939,296
|
Nov 27 |
HL026 |
Exome |
s8,CVF-N(USER/S1, A/B) |
- |
Zhang Lab |
Alan |
60bp |
9,364,209
|
Nov 27 |
HL025 |
Exome |
s1,PGP3 #8-9 |
- |
Zhang Lab |
Alan |
60bp |
9,106,173
|
Nov 27 |
HL025 |
Exome |
s2,PGP5 #8-9 |
- |
Zhang Lab |
Alan |
60bp |
10,174,527
|
Nov 23 |
HL025 |
Exome |
s3,PGP7 #8-9 |
- |
Zhang Lab |
Alan |
60bp |
16,653,644
|
Nov 23 |
HL025 |
Exome |
s4,CpgSeq Harvard #2 |
- |
Zhang Lab |
Jie |
60bp |
failed
|
Nov 23 |
HL025 |
Exome |
s5,CpgSeq Harvard #5 |
- |
Zhang Lab |
Jie |
60bp |
12914061
|
Nov 23 |
HL025 |
Exome |
s6,CV-fibroblast #1-7 (Alice) |
- |
Zhang Lab |
Alan |
60bp |
17,745,112
|
Nov 23 |
HL025 |
Exome |
s7,CV-iPS #1-7 (Alice) |
- |
Zhang Lab |
Alan |
60bp |
18,466,358
|
Nov 23 |
HL025 |
Exome |
s8,CV-fibroblast New (#6-7) |
- |
Zhang Lab |
Alan |
60bp |
10,392,332
|
Nov 19 |
HL024 |
Exome |
s1,PGP1L, set 1-7 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
16,060,639
|
Nov 19 |
HL024 |
Exome |
s2,PGP1L, set 1-7 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
16,406,685
|
Nov 19 |
HL024 |
Exome |
s3,PGP1L, set 8 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
13,861,016
|
Nov 19 |
HL024 |
Exome |
s4,PGP1L, set 9 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
12,455,546
|
Nov 19 |
HL024 |
Hap |
s5,N12 |
- |
Zhang Lab |
Sam |
60bp |
11,320,511
|
Nov 19 |
HL024 |
Exome |
s6,PGP8B |
- |
Zhang Lab |
Billy/Luhan |
60bp |
7,466,479
|
Nov 19 |
HL024 |
BCM |
s7,P1 (Baylor) |
- |
Zhang Lab |
Baylor |
60bp |
4,934,597
|
Nov 19 |
HL024 |
BCM |
s8,P4 (Baylor) |
- |
Zhang Lab |
Baylor |
60bp |
1,602,572
|
Nov 13 |
HL023 |
Exome |
s1,PGP1-iPS, set 1-7 |
- |
Zhang Lab |
Alan(11/05) |
60bp |
12,404,414
|
Nov 13 |
HL023 |
Exome |
s2,PGP1-iPS, set 1-7 |
- |
Zhang Lab |
Alan(11/05) |
60bp |
13,314,169
|
Nov 13 |
HL023 |
Exome |
s3,PGP1-iPS, set 8 |
- |
Zhang Lab |
Alan(11/05) |
60bp |
16,787,057
|
Nov 13 |
HL023 |
Exome |
s4,PGP1-iPS, set 9 |
- |
Zhang Lab |
Alan(11/05) |
60bp |
15,362,879
|
Nov 13 |
HL023 |
Exome |
s5,DF6-9-9, set 8 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
16,614,857
|
Nov 13 |
HL023 |
Exome |
s6,DF6-9-9, set 9 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
16,897,414
|
Nov 13 |
HL023 |
Exome |
s7,Foreskin, set 8 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
16,023,565
|
Nov 13 |
HL023 |
Exome |
s8,Foreskin, set 9 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
10,656,758
|
Nov 09 |
HL022 |
Exome |
s1,DF6-9-9, set 1-7 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
12,652,000
|
Nov 09 |
HL022 |
Exome |
s2,DF6-9-9, set 1-7 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
11,579,830
|
Nov 09 |
HL022 |
Exome |
s3,Foreskin, set 1-7 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
9,624,602
|
Nov 09 |
HL022 |
Exome |
s4,Foreskin, set 1-7 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
8,249,755
|
Nov 09 |
HL022 |
Exome |
s5,CV-iPS (new), set 1-7 |
- |
Zhang Lab |
Alan(11/05) |
60bp |
10,237,538
|
Nov 09 |
HL022 |
Exome |
s6,CV-iPS (new), set 1-7 |
- |
Zhang Lab |
Alan(11/05) |
60bp |
10,621,342
|
Nov 09 |
HL022 |
Exome |
s7,CV-iPS (new), set 1-7 |
- |
Zhang Lab |
Alan(11/05) |
60bp |
14,439,349
|
Nov 09 |
HL022 |
Exome |
s8, ChrWGA-N10 |
- |
Zhang Lab |
Sam |
60bp |
8,624,207
|
Oct 29 |
HL020 |
Exome |
s1,CV-iPS, set 8 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
15,416,990
|
Oct 29 |
HL020 |
Exome |
s2,CV-iPS, set 9 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
17,569,551
|
Oct 29 |
HL020 |
Exome |
s3,CV-fibroblast, set 8 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
16,895,701
|
Oct 29 |
HL020 |
Exome |
s4,CV-fibroblast, set 9 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
15,502,227
|
Oct 29 |
HL020 |
Exome |
s5,NA12878, set 8 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
16,231,983
|
Oct 29 |
HL020 |
Exome |
s6,NA12878, set 8 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
17,231,313
|
Oct 29 |
HL020 |
Exome |
s7,NA12878, set 9 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
16,903,121
|
Oct 29 |
HL020 |
Exome |
s8,NA12878, set 9 |
- |
Zhang Lab |
Alice(10/28) |
60bp |
13,743,218
|
Oct 26 |
HL019 |
CTM |
s1,PGP1L-CTM1(HpaII) |
- |
Zhang Lab |
Zymo |
40bp |
|
Oct 26 |
HL019 |
CTM |
s2,PGP1L-CTM2(MspI) |
- |
Zhang Lab |
Zymo |
40bp |
|
Oct 26 |
HL019 |
CTM |
s3,PGP1L-CTM3(4-RE) |
- |
Zhang Lab |
Zymo |
40bp |
|
Oct 26 |
HL019 |
Exome |
s4,PGP4 |
- |
Zhang Lab |
Billy |
40bp |
|
Oct 26 |
HL019 |
Exome |
s5,PGP4 |
- |
Zhang Lab |
Billy |
40bp |
|
Oct 26 |
HL019 |
Exome |
s6,PGP6 |
- |
Zhang Lab |
Billy |
40bp |
|
Oct 26 |
HL019 |
Exome |
s7,PGP6 |
- |
Zhang Lab |
Billy |
40bp |
|
Oct 26 |
HL019 |
Exome |
s8,PGP10 |
- |
Zhang Lab |
Billy |
40bp |
|
Oct 23 |
HL018 |
Exome |
s1,PGP1-iPS |
- |
Zhang Lab |
Alice(10/09) |
40bp |
14,503,245
|
Oct 23 |
HL018 |
Exome |
s2,PGP1-iPS |
- |
Zhang Lab |
Alice(10/09) |
40bp |
14,834,731
|
Oct 23 |
HL018 |
Exome |
s3,NA12878_EL_140.2 |
- |
Zhang Lab |
Kun |
40bp |
16,130,004
|
Oct 23 |
HL018 |
Exome |
s4,NA12878_EL_140.2 |
- |
Zhang Lab |
Kun |
40bp |
16,868,359
|
Oct 23 |
HL018 |
Exome |
s5,NA12878_EL_140.2 |
- |
Zhang Lab |
Kun |
40bp |
18,464,088
|
Oct 23 |
HL018 |
Exome |
s6,NA12878_EL_140.2 |
- |
Zhang Lab |
Kun |
40bp |
18,744,329
|
Oct 23 |
HL018 |
Exome |
s7,CV-iPS |
- |
Zhang Lab |
Alice(10/09) |
40bp |
17,369,523
|
Oct 23 |
HL018 |
Exome |
s8,CV-Fibroblast |
- |
Zhang Lab |
Alice(10/09) |
40bp |
15,991,415
|
Oct 20 |
HL017 |
Exome |
s1,PGP1-iPS |
- |
Zhang Lab |
Alice(10/09) |
40bp |
16,124,303
|
Oct 20 |
HL017 |
Exome |
s2,DF6-9-9 |
- |
Zhang Lab |
Alice(10/09) |
40bp |
18,701,054
|
Oct 20 |
HL017 |
Exome |
s3,Foreskin |
- |
Zhang Lab |
Alice(10/09) |
40bp |
17,660,876
|
Oct 20 |
HL017 |
Exome |
s4,CV-iPS |
- |
Zhang Lab |
Alice(10/09) |
40bp |
17,798,921
|
Oct 20 |
HL017 |
Exome |
s5,CV-iPS |
- |
Zhang Lab |
Alice(10/09) |
40bp |
18,054,888
|
Oct 20 |
HL017 |
Exome |
s6,CV-fibroblast |
- |
Zhang Lab |
Alice(10/09) |
40bp |
18,120,291
|
Oct 20 |
HL017 |
Exome |
s7,NA12878_EL_140.2 |
- |
Zhang Lab |
Kun |
40bp |
17,106,926
|
Oct 20 |
HL017 |
Exome |
s8,NA12878_EL_140.3 |
- |
Zhang Lab |
Kun |
40bp |
17,261,477
|
Oct 18 |
HL016 |
Exome |
s1,CV-fibroblast |
- |
Zhang Lab |
Alice(10/09) |
40bp |
15,670,145
|
Oct 18 |
HL016 |
Exome |
s2,CV-fibroblast |
- |
Zhang Lab |
Alice(10/09) |
40bp |
15,907,544
|
Oct 18 |
HL016 |
Exome |
s3,CV-iPS |
- |
Zhang Lab |
Alice(10/09) |
40bp |
15,818,281
|
Oct 18 |
HL016 |
Exome |
s4,CV-iPS |
- |
Zhang Lab |
Alice(10/09) |
40bp |
16,080,730
|
Oct 18 |
HL016 |
Exome |
s5,DF6 |
- |
Zhang Lab |
Alice(10/09) |
40bp |
16,231,745
|
Oct 18 |
HL016 |
Exome |
s6,DF6 |
- |
Zhang Lab |
Alice(10/09) |
40bp |
16,377,593
|
Oct 18 |
HL016 |
Exome |
s7,Foreskin |
- |
Zhang Lab |
Alice(10/09) |
40bp |
15,732,166
|
Oct 18 |
HL016 |
Exome |
s8,Foreskin |
- |
Zhang Lab |
Alice(10/09) |
40bp |
15,019,512
|
Oct 15 |
HL015 |
Exome |
s1,PGP8 |
- |
Zhang Lab |
Billy |
40bp |
13,429,437
|
Oct 15 |
HL015 |
Exome |
s2,PGP8 |
- |
Zhang Lab |
Billy |
40bp |
13,978,474
|
Oct 15 |
HL015 |
Exome |
s3,PGP8 |
- |
Zhang Lab |
Billy |
40bp |
13,935,910
|
Oct 15 |
HL015 |
Exome |
s4,PGP9 |
- |
Zhang Lab |
Billy |
40bp |
13,692,249
|
Oct 15 |
HL015 |
Exome |
s5,PGP9 |
- |
Zhang Lab |
Billy |
40bp |
12,912,972
|
Oct 15 |
HL015 |
Exome |
s6,PGP9 |
- |
Zhang Lab |
Billy |
40bp |
12,823,767
|
Oct 15 |
HL015 |
Exome |
s7,NA12878 |
- |
Zhang Lab |
Billy |
40bp |
16,883,674
|
Oct 15 |
HL015 |
Exome |
s8,NA12878 |
- |
Zhang Lab |
Billy |
40bp |
15,379,183
|
Oct 12 |
HL014 |
Exome |
s1,DF6-9-9 |
- |
Zhang Lab |
Alice(10/09) |
40bp |
8,305,141
|
Oct 12 |
HL014 |
Exome |
s2,foreskin |
- |
Zhang Lab |
Alice(10/09) |
40bp |
8,488,946
|
Oct 12 |
HL014 |
Exome |
s3,PGP1-ips |
- |
Zhang Lab |
Alice(10/09) |
40bp |
5,966,433
|
Oct 12 |
HL014 |
Exome |
s4,CV-ips |
- |
Zhang Lab |
Alice(10/09) |
40bp |
4,351,085
|
Oct 12 |
HL014 |
Exome |
s5,CV-fibroblast |
- |
Zhang Lab |
Alice(10/09) |
40bp |
3,621,861
|
Oct 12 |
HL014 |
Exome |
s6,PGP7 |
- |
Zhang Lab |
Alice(10/09) |
40bp |
11,805,391
|
Oct 12 |
HL014 |
Exome |
s7,PGP8 |
- |
Zhang Lab |
Billy |
40bp |
14,330,453
|
Oct 12 |
HL014 |
Exome |
s8,PGP9 |
- |
Zhang Lab |
Billy |
40bp |
12,477,329
|
Oct 08 |
HL013 |
Exome |
s1,PGP1 |
- |
Zhang Lab |
Billy |
40bp |
14872773
|
Oct 08 |
HL013 |
Exome |
s2,PGP2 |
- |
Zhang Lab |
Billy |
40bp |
13777534
|
Oct 08 |
HL013 |
Exome |
s3,PGP3 |
- |
Zhang Lab |
Billy |
40bp |
10536677
|
Oct 08 |
HL013 |
Exome |
s4,PGP5 |
- |
Zhang Lab |
Billy |
40bp |
8445974
|
Oct 08 |
HL013 |
BSPP-30k |
s5,DF6-9-9-cpg30k |
- |
Zhang Lab |
Ida |
40bp |
9684020
|
Oct 08 |
HL013 |
BSPP-30k |
s6,Foreskin |
- |
Zhang Lab |
Ida |
40bp |
13740681
|
Oct 08 |
HL013 |
USC-Hsieh |
s7,USC,MH010B xMboI |
- |
Zhang Lab |
Kyle |
40bp |
18388915
|
Oct 08 |
HL013 |
USC-Hsieh |
s8,USC,TCF #3 |
- |
Zhang Lab |
Kyle |
40bp |
14866071
|
Oct 05 |
HL011 |
Exome |
s1,PGP8 |
- |
Zhang Lab |
Billy |
40bp |
|
Oct 05 |
HL011 |
Exome |
s2,PGP8 |
- |
Zhang Lab |
Billy |
40bp |
|
Oct 05 |
HL011 |
Exome |
s3,PGP9 |
- |
Zhang Lab |
Billy |
40bp |
|
Oct 05 |
HL011 |
Exome |
s4,PGP9 |
- |
Zhang Lab |
Billy |
40bp |
|
Oct 05 |
HL011 |
Exome |
s5,NA12878 |
- |
Zhang Lab |
Billy |
40bp |
|
Oct 05 |
HL011 |
Exome |
s6,NA12878 |
- |
Zhang Lab |
Billy |
40bp |
|
Oct 05 |
HL011 |
USC-Hsieh |
s7,USC,MH010B xMboI |
- |
Zhang Lab |
Kyle |
40bp |
|
Oct 05 |
HL011 |
USC-Hsieh |
s8,USC,TCF #3 |
- |
Zhang Lab |
Kyle |
40bp |
|
Oct 01 |
HL012 |
Exome |
s1,CV-ips (unsheared) |
- |
Zhang Lab |
Alice&Ida |
80bp |
16,072,089
|
Oct 01 |
HL012 |
Exome |
s2,CV-Fibr(unsheared) |
- |
Zhang Lab |
Alice&Ida |
80bp |
16,826,803
|
Oct 01 |
HL012 |
Exome |
s3,NA21687, Cpg97k |
- |
Zhang Lab |
Ida |
80bp |
8,235,105
|
Oct 01 |
HL012 |
Exome |
s4,PhiX |
- |
Zhang Lab |
Illumina |
80bp |
14,496,850
|
Oct 01 |
HL012 |
Exome |
s5,NA21781 |
- |
Zhang Lab |
Ida |
80bp |
0
|
Oct 01 |
HL012 |
Exome |
s6,NA21833 |
- |
Zhang Lab |
Ida |
80bp |
3,293,913
|
Oct 01 |
HL012 |
Exome |
s7,NA21660 |
- |
Zhang Lab |
Ida |
80bp |
8,297
|
Oct 01 |
HL012 |
Exome |
s8,NA21731 |
- |
Zhang Lab |
Ida |
80bp |
11,048,272 |
|
Sept 26 |
HL010 |
Exome |
s1,CV-ips |
- |
Zhang Lab |
Alice(09/21) |
40bp |
17,770,197 |
13,270,733
|
Sept 26 |
HL010 |
Exome |
s2,CV-ips |
- |
Zhang Lab |
Alice |
40bp |
17,143,085
|
Sept 26 |
HL010 |
Exome |
s3,CV-fibroblast |
- |
Zhang Lab |
Alice(09/21) |
40bp |
14,248,797 |
|
Sept 26 |
HL010 |
Exome |
s4,CV-fibroblast |
- |
Zhang Lab |
Alice(09/21) |
40bp |
13,741,749 |
|
Sept 26 |
HL010 |
Exome |
s5,DF6-9-9 |
- |
Zhang Lab |
Alice(09/21) |
40bp |
14,210,912
|
Sept 26 |
HL010 |
Exome |
s6,foreskin |
- |
Zhang Lab |
Alice(09/21) |
40bp |
14,514,230
|
Sept 26 |
HL010 |
Exome |
s7,PGP8 |
- |
Zhang Lab |
Billy |
40bp |
11,980,992 |
|
Sept 26 |
HL010 |
Exome |
s8,PGP9 |
- |
Zhang Lab |
Billy |
40bp |
13,292,848 |
|
Sept 23 |
AL003 |
Exome |
s1,DF6-9-9 |
- |
Zhang Lab |
Alice(09/21) |
40bp |
16,395,953 |
13,954,426
|
Sept 23 |
AL003 |
Exome |
s2,foreskin |
- |
Zhang Lab |
Alice(09/21) |
40bp |
17,323,121 |
14,344,756
|
Sept 23 |
AL003 |
Exome |
s3,PGP1-ips |
- |
Zhang Lab |
Alice(09/21) |
40bp |
17,005,060
|
Sept 23 |
AL003 |
Exome |
s4,CV-ips |
- |
Zhang Lab |
Alice(09/21) |
40bp |
17,848,289 |
13,344,177
|
Sept 23 |
AL003 |
Exome |
s5,CV-fibroblast |
- |
Zhang Lab |
Alice(09/21) |
40bp |
18,152,672 |
15,372,979
|
Sept 23 |
AL003 |
Exome |
s6,NA12878-3 |
- |
Zhang Lab |
Alice(09/21) |
40bp |
18,391,593 |
14,109,009
|
Sept 23 |
AL003 |
USC-Hsieh |
s7,DK4#2 |
- |
Zhang Lab |
Kyle |
40bp |
13,632,900 |
11,976,351
|
Sept 23 |
AL003 |
USC-HSieh |
s8,TK9 |
- |
Zhang Lab |
Kyle |
40bp |
16,272,821 |
15,168,255
|
Sept 18 |
AL002 |
Exome |
s1,DF6-9-9 |
- |
Zhang Lab |
Alice(09/15) |
40bp |
16,173,475
|
Sept 18 |
AL002 |
Exome |
s2,foreskin |
- |
Zhang Lab |
Alice(09/15) |
40bp |
10,863,012
|
Sept 18 |
AL002 |
Exome |
s3,CV-ips |
- |
Zhang Lab |
Alice(09/15) |
40bp |
8,306,219
|
Sept 18 |
AL002 |
Exome |
s4,CV-fibroblast |
- |
Zhang Lab |
Alice(09/15) |
40bp |
3,987,069
|
Sept 18 |
AL002 |
- |
s5,PhiX-2nd |
- |
Zhang Lab |
Alice |
40bp |
-
|
Sept 18 |
AL002 |
USC-Hsieh |
s6,MH001 H2 xHeaIII |
- |
Zhang Lab |
Kyle |
40bp |
19,490,463 |
18,566,845
|
Sept 18 |
AL002 |
USC-Hsieh |
s7,MH010B xDpnI |
- |
Zhang Lab |
Kyle |
40bp |
19,160,830 |
18,435,611
|
Sept 18 |
AL002 |
USC-Hsieh |
s8,Tk4 #2 |
- |
Zhang Lab |
Kyle |
40bp |
16,343,257 |
15,039,726
|
Sept 11 |
AL001 |
Exome |
s1,DF6-9-9 |
- |
Zhang Lab |
Alice |
40bp |
5,115,027
|
Sept 11 |
AL001 |
Exome |
s2,foreskin |
- |
Zhang Lab |
Alice |
40bp |
1,480,281
|
Sept 11 |
AL001 |
- |
s3,PhiX-2nd(re-amplified) |
- |
Zhang Lab |
Alice |
40bp |
12,640,504
|
Sept 11 |
AL001 |
- |
s4,PhiX |
- |
Zhang Lab |
- |
40bp |
12,737,950
|
Sept 11 |
AL001 |
BSPP |
s5,Na21660-cpg97k |
- |
Zhang Lab |
Jie |
40bp |
1,624,500 |
15%
|
Sept 11 |
AL001 |
BSPP |
s6,DFips-cpg30k+97k |
- |
Zhang Lab |
Jie |
40bp |
12,230,825 |
52%
|
Sept 11 |
AL001 |
USC-Hsieh |
s7,MH010B x DpnI |
- |
Zhang Lab |
Kyle |
40bp |
-
|
Sept 11 |
AL001 |
USC-Hsieh |
s8,Pol II |
- |
Zhang Lab |
Kyle |
40bp |
7,545,937 |
4,581,330
|
Sept 07 |
HL007 |
Exome |
s1,PGP4 |
- |
Zhang Lab |
Billy |
36bp |
12,221,023 |
-
|
Sept 07 |
HL007 |
Exome |
s2,PGP4 |
- |
Zhang Lab |
Billy |
36bp |
12,462,164 |
-
|
Sept 07 |
HL007 |
Exome |
s3,PGP6 |
- |
Zhang Lab |
Billy |
36bp |
12,781,093 |
-
|
Sept 07 |
HL007 |
Exome |
s4,PGP6 |
- |
Zhang Lab |
Billy |
36bp |
13,207,084 |
-
|
Sept 07 |
HL007 |
Exome |
s5,PGP10 |
- |
Zhang Lab |
Billy |
36bp |
11,853,340 |
-
|
Sept 07 |
HL007 |
Exome |
s6,PGP10 |
- |
Zhang Lab |
Billy |
36bp |
12,091,086 |
-
|
Sept 07 |
HL007 |
BSPP-97k |
s7,50192A |
- |
Zhang Lab |
Jie |
36bp |
17,131,060 |
29%
|
Sept 07 |
HL007 |
BSPP-97k |
s8,50192B |
- |
Zhang Lab |
Jie |
36bp |
16,378,655 |
28%
|
August 29 |
HL009-3 |
Exome |
s1,DF6-9-9 |
60nM |
Zhang Lab |
Alice |
40bp |
-
|
August 29 |
HL009-3 |
Exome |
s2,DF6-9-9 |
60nM |
Zhang Lab |
Alice |
40bp |
-
|
August 29 |
HL009-3 |
Exome |
s3,foreskin |
45nM |
Zhang Lab |
Alice |
40bp |
-
|
August 29 |
HL009-3 |
Exome |
s4,foreskin |
45nM |
Zhang Lab |
Alice |
40bp |
-
|
August 29 |
HL009-3 |
Exome |
s5,PGP1-ips |
38nM |
Zhang Lab |
Alice |
40bp |
-
|
August 29 |
HL009-3 |
Exome |
s6,CV-ips |
90nM |
Zhang Lab |
Alice |
40bp |
-
|
August 29 |
HL009-3 |
Exome |
s7,CV-fibroblast |
76nM |
Zhang Lab |
Alice |
40bp |
-
|
August 29 |
HL009-3 |
Exome |
s8,PGP1 |
34nM |
Zhang Lab |
Alice |
40bp |
-
|
August 26 |
HL008 |
Exome |
s1,PGP4 |
- |
Zhang Lab |
Billy |
40bp |
14295243 |
-
|
August 26 |
HL008 |
Exome |
s2,PGP6 |
- |
Zhang Lab |
Billy |
40bp |
15558898 |
-
|
August 26 |
HL008 |
Exome |
s3,PGP10 |
- |
Zhang Lab |
Billy |
40bp |
15871619 |
-
|
August 26 |
HL008 |
BSPP-97k |
s4,50192A |
- |
Zhang Lab |
Jie |
40bp |
10401608 |
-
|
August 26 |
HL008 |
BSPP-97k |
s5,50192B |
- |
Zhang Lab |
Jie |
40bp |
9693893 |
-
|
August 26 |
HL008 |
Exome |
s6,Foreskin |
- |
Zhang Lab |
Alice |
40bp |
14739764 |
-
|
August 26 |
HL008 |
Exome |
s7,PGP4(MmeI) |
- |
Zhang Lab |
Billy |
40bp |
12106286 |
-
|
August 26 |
HL008 |
Control |
s8,PhiX |
- |
Zhang Lab |
Illumina |
40bp |
10161944 |
-
|
August 16 |
HL006 |
Exome |
s1,DF6-9-9 |
- |
Zhang Lab |
Alice |
40bp |
5,684,406 |
-
|
August 16 |
HL006 |
Exome |
s2,Foreskin |
- |
Zhang Lab |
Alice |
40bp |
8,009,671 |
-
|
August 16 |
HL006 |
Exome |
s3,Foreskin-lig |
- |
Zhang Lab |
Alice |
40bp |
8,369,819 |
-
|
August 16 |
HL006 |
Exome |
s4,NA12878 |
- |
Zhang Lab |
Alice |
40bp |
7,487,512 |
-
|
August 16 |
HL006 |
Exome |
s5,NA12878-lig |
- |
Zhang Lab |
Alice |
40bp |
8,411,077 |
-
|
August 16 |
HL006 |
Exome |
s6,NA12878 |
- |
Zhang Lab |
Billy |
40bp |
8,556,271 |
-
|
August 16 |
HL006 |
Exome |
s7,PGP10 |
- |
Zhang Lab |
Billy |
40bp |
9,736,297 |
-
|
August 16 |
HL006 |
Control |
s8,PhiX |
- |
Zhang Lab |
Illumina |
40bp |
6,985,337 |
-
|
August 13 |
HL005 |
Exome |
NA12878 |
- |
Zhang lab |
Billy |
40bp |
15,666,228 |
|
August 13 |
HL005 |
Exome |
NA12878 |
- |
Zhang lab |
Billy |
40bp |
14,091,504 |
|
August 13 |
HL005 |
BSPP-97k |
Par1 |
- |
Zhang lab |
Jie Deng |
40bp |
10,385,536 |
3,005,889 |
12%
|
August 13 |
HL005 |
BSPP-97k |
Par9 |
- |
Zhang lab |
Jie Deng |
40bp |
7,537,771 |
3,430,524 |
21%
|
August 13 |
HL005 |
USC-Hsieh |
MH010B xMboI |
- |
Zhang lab |
Kyle |
40bp |
6,699,431 |
6,125,263
|
August 13 |
HL005 |
USC-Hsieh |
MH010B xDpnI |
- |
Zhang lab |
Kyle |
40bp |
2,204,512 |
2,094,844
|
August 13 |
HL005 |
Exome(end-sequencing) |
PGP2S-Phu |
54.5nM |
Zhang lab |
Alice Li |
40bp |
7,022,465 |
5,950,793
|
August 13 |
HL005 |
Exome(end-sequencing) |
PGP2S-iProof |
60.6nM |
Zhang lab |
Alice Li |
40bp |
5,798,969 |
4,756,952
|
August 09 |
HL004 |
Exome |
s1,DF6-9-9-lig |
- |
Zhang Lab |
Alice |
40bp |
17,147,112 |
-
|
August 09 |
HL004 |
Exome |
s2,DF6-9-9-lig |
- |
Zhang Lab |
Alice |
40bp |
16,956,048 |
-
|
August 09 |
HL004 |
Exome |
s3,Foreskin-lig |
- |
Zhang Lab |
Alice |
40bp |
16,802,403 |
-
|
August 09 |
HL004 |
Exome |
s4,PGP10 |
- |
Zhang Lab |
Billy |
40bp |
18,644,730 |
-
|
August 09 |
HL004 |
Exome |
s5,PGP4 |
- |
Zhang Lab |
Billy |
40bp |
18,809,762 |
-
|
August 09 |
HL004 |
Exome |
s6,PGP4 |
- |
Zhang Lab |
Billy |
40bp |
18,970,955 |
-
|
August 09 |
HL004 |
Exome |
s7,PGP6 |
- |
Zhang Lab |
Billy |
40bp |
18,723,412 |
-
|
August 09 |
HL004 |
Exome |
s8,PGP6 |
- |
Zhang Lab |
Billy |
40bp |
19,233,480 |
-
|
August 05 |
HL003 |
Exome |
s1,DF6-9-9 |
- |
Zhang Lab |
Alice |
40bp |
4,417,586 |
2,288,789
|
August 05 |
HL003 |
Exome |
s2,Foreskin |
- |
Zhang Lab |
Alice |
40bp |
5,020,353 |
3,214,546
|
August 05 |
HL003 |
Exome |
s3,Foreskin-lig |
- |
Zhang Lab |
Alice |
40bp |
6,660,328 |
3,119,331
|
August 05 |
HL003 |
Exome |
s4,NA12878 |
- |
Zhang Lab |
Alice |
40bp |
3,727,520 |
1,981,326
|
August 05 |
HL003 |
Exome |
s5,NA12878-lig |
- |
Zhang Lab |
Alice |
40bp |
6,455,281 |
3,253,093
|
August 05 |
HL003 |
Exome |
s6,NA12878 |
- |
Zhang Lab |
Billy |
40bp |
14,992,076 |
8,643,897
|
August 05 |
HL003 |
Exome |
s7,PGP10 |
- |
Zhang Lab |
Billy |
40bp |
19,423,381 |
11,040,240
|
August 05 |
HL003 |
Control |
s8,PhiX |
- |
Zhang Lab |
Illumina |
40bp |
20,078,536 |
19,817,515
|
July 28 |
HL002 |
Exome |
s1,PhiX |
- |
Zhang Lab |
Illumina |
40bp |
19474917 |
-
|
July 28 |
HL002 |
Exome |
s2,Hues 6 ES-Dscp |
- |
Zhang Lab |
Kun |
40bp |
9991852 |
-
|
July 28 |
HL002 |
Exome |
s3,Hues 6 ES-trp |
- |
Zhang Lab |
Kun |
40bp |
8386791 |
-
|
July 28 |
HL002 |
Exome |
s4,NA12878 |
- |
Zhang Lab |
Alice |
40bp |
15015962 |
-
|
July 28 |
HL002 |
Exome |
s5,NA12878 |
- |
Zhang Lab |
Alice |
40bp |
15092576 |
-
|
July 28 |
HL002 |
Exome |
s6,NA12878 |
- |
Zhang Lab |
Alice |
40bp |
15223607 |
-
|
July 28 |
HL002 |
Exome |
s7,PGP10 |
- |
Zhang Lab |
Alice |
40bp |
15059266 |
-
|
July 28 |
HL002 |
RNA |
s8,CES8k-Hybrid1-ES |
- |
Zhang Lab |
Kun |
40bp |
8178891 |
-
|
Jan-Jun
Month
|
Date
|
Probe Set
|
Tube label
|
Conc. x vol.
|
Seq facility
|
Lib. Const.
|
Read length
|
# filtered reads
|
# mappable reads
|
Feb |
6 |
BSPP-30k-PE |
BJ |
75.4nM x 15ul; |
BioGem |
Jie |
36bp x 2 |
7,662,828 |
2,535,784
|
Feb |
6 |
BSPP-30k-PE |
Hybrid_1 |
87.6nM x 15ul; |
BioGem |
Jie |
36bp x 2 |
6,829,142 |
1,946,531
|
Feb |
6 |
BSPP-30k-PE |
PGP1_F |
106nM x 15ul; |
BioGem |
Jie |
36bp x 2 |
8,441,376 |
2,854,604
|
Feb |
6 |
BSPP-30k-PE |
HUES12 |
74.9nM x 15ul; |
BioGem |
Jie |
36bp x 2 |
7,404,514 |
1,424,697
|
Feb |
6 |
BSPP-30k-PE |
PGP1_iPS1 |
90.3nM x 15ul; |
BioGem |
Jie |
36bp x 2 |
5,617,832 |
1,899,427
|
Feb |
6 |
BSPP-30k-PE |
PGP1_L |
77.6nM x 15ul; |
BioGem |
Jie |
36bp x 2 |
5,258,188 |
2,220,886
|
Feb |
6 |
BSPP-30k-PE |
PGP3_L |
80.9nM x 15ul; |
BioGem |
Jie |
36bp x 2 |
5,286,442 |
1,838,971
|
Feb |
6 |
BSPP-30k-PE |
PGP9_L |
96.9nM x 15ul; |
BioGem |
Jie |
36bp x 2 |
5,689,552 |
2,292,028
|
|
|
|
|
|
|
|
March |
13 |
Exome |
PGP1-CTRL |
48.5ng/ul; 30ul |
Billy Li (Harvard) |
Alice Li |
40bp |
9,707,995 |
7,655,774
|
March |
13 |
Exome |
PGP1-shaked |
46ng/ul; 30ul |
Billy Li (Harvard) |
Alice Li |
40bp |
9,424,752 |
7,561,445
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
May |
25 |
Exome |
PGP1E0509A |
77nM; 40ul |
BioGem |
Alice Li |
76bp |
7,471,741 |
1,086,264
|
May |
25 |
Exome |
PGP2E0509A |
64nM; 40ul |
BioGem |
Alice Li |
76bp |
5,014,823 |
2,595,521
|
May |
25 |
Exome |
PGP3E0509A |
49.5nM; 40ul |
BioGem |
Alice Li |
76bp |
5,358,442 |
3,213,790
|
May |
25 |
Exome |
NA12878E0509A |
60nM; 40ul |
BioGem |
Alice Li |
76bp |
7,360,495 |
2,673,495
|
May |
25 |
Exome |
PGP1E0509k |
19nM; 40ul |
BioGem |
Kun Zhang |
76bp |
3,520,981 |
2,350,708
|
May |
25 |
Exome |
PGP2E0509k |
20nM; 40ul |
BioGem |
Kun Zhang |
76bp |
5,095,881 |
2,568,349
|
May |
25 |
Exome |
PGP3E0509k |
19nM; 40ul |
BioGem |
Kun Zhang |
76bp |
3,734,068 |
1,989,542
|
May |
25 |
Exome |
NA12878E0509k |
33nM; 40ul |
BioGem |
Kun Zhang |
76bp |
3,900,764 |
778,134
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
May |
26 |
BSPP_end seq |
NA21070*1 100406 captured targets |
25.3ng/ul (96nM) x 15ul; |
Yuan Gao |
Jie/Kun |
40bp |
2,535,463
|
May |
26 |
BSPP_end seq |
NA21070*1 100406 normalized captured targets |
23.1ng/ul (87nM) x 15ul; |
Yuan Gao |
Jie/Kun |
40bp |
2,377,687
|
|
|
|
|
|
|
|
May |
29 |
Exome(end sequencing) |
PGP2_052909A |
111nM; 15ul |
Yuan Gao |
Alice Li |
40bp |
6,390,979
|
May |
29 |
Exome(end sequencing) |
PGP3_052909A |
126nM; 15ul |
Yuan Gao |
Alice Li |
40bp |
6,110,991
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
June |
4 |
Exome |
PGP5-1-060809 |
62.5nM; 10ul |
BioGem |
Alice Li |
36bp |
14,404,283 |
10,812,047
|
June |
4 |
Exome |
PGP5-2-060809 |
65.7nM; 10ul |
BioGem |
Alice Li |
36bp |
14,994,770 |
11,253,456
|
June |
4 |
Exome |
PGP7-1-060809 |
75.5nM; 10ul |
BioGem |
Alice Li |
36bp |
13,384,832 |
9,712,648
|
June |
4 |
Exome |
PGP7-2-060809 |
79.7nM; 20ul |
BioGem |
Alice Li |
36bp |
14,204,382/13,509,137 |
10,519,374/9,961,481
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
June |
8 |
BSPP |
DF6-9-9_P16(4) |
11nM x 10ul x 2 lanes; |
BioGem |
Jie |
36bp |
4,688,926
|
June |
8 |
BSPP |
foreskin |
15nM x 10ul x 1 lane. |
BioGem |
Jie |
36bp |
3,320,865 |
1,825,557
|
|
|
|
|
|
|
|
June |
10 |
Exome |
PGP1-3-061009 |
34nM; 15ul |
Bing Ren |
Alice Li |
76bp |
5,802,565 |
|
June |
10 |
Exome |
PGP2-3-061009 |
25nM; 15ul |
Bing Ren |
Alice Li |
76bp |
3,193,644 |
|
June |
10 |
Exome |
PGP3-3-061009 |
22nM; 15ul |
Bing Ren |
Alice Li |
76bp |
2,465,788 |
|
June |
10 |
Exome |
NA12878-3-061009 |
22nM; 15ul |
Bing Ren |
Alice Li |
76bp |
1,285,265 |
|
June |
10 |
BSPP |
NA21070*1_100406_97k |
21.2nM x 14ul; |
Bing Ren |
Jie |
76bp |
2,682,703 |
424,191
|
June |
10 |
BSPP |
DF6-9-9_P16(4)_30k |
21.2nM x 14ul; |
Bing Ren |
Jie |
76bp |
918,811 |
151,519
|
June |
10 |
BSPP |
foreskin_30k |
21.2nM x 14ul; |
Bing Ren |
Jie |
76bp |
424,770 |
65,177
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
June |
18 |
Exome |
PGP5-1-060809 |
62.5nM; 5ul |
Bing Ren |
Alice Li |
41bp |
4,122,460
|
June |
18 |
Exome |
PGP5-2-060809 |
65.7nM; 5ul |
Bing Ren |
Alice Li |
41bp |
3,907,906
|
June |
18 |
Exome |
PGP7-1-060809 |
75.5nM; 5ul |
Bing Ren |
Alice Li |
41bp |
1,419,496
|
June |
18 |
CES27k9bp_end sequening |
Hybrid_1_CES27k9bp |
4.3ng/ul (37nM) x 5ul |
Bing Ren |
Jie |
41bp |
7,484,832
|
June |
18 |
CES27k9bp_end sequening |
BJ_CES27k9bp |
7.2ng/ul (62nM) x 5ul |
Bing Ren |
Jie |
41bp |
5,643,984
|
June |
18 |
BSPP |
DF6-9-9_P16(4)_97k_repeat |
11nM x 5ul |
Bing Ren |
Jie |
41bp |
4,761,133
|
June |
18 |
BSPP |
foreskin_97k_repeat |
7.5nM x 5ul |
Bing Ren |
Jie |
41bp |
6,683,303
|
|