GA record

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Revision as of 22:40, 31 May 2013 by >Alan6017518 (→‎2013)
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2013

Run Tracking 1st Cycle Report Summary % Good Clusters Yield (kbases)
130104_SN1001 Tracking FBase Summary 92.19 358,197,114
130119_HL141 Tracking FBase Summary ? ?
130128_HL142 Tracking FBase Summary ? ?
130205_MiSeqFeb5 Tracking FBase Summary ? ?
130207_HL143 Tracking FBase Summary ? ?
130219_HL144 Tracking FBase Summary ? ?
130227_HiSeqFeb27 Tracking FBase Summary ? ?
130226_HL145 Tracking FBase Summary 81% 18,771,616 (PE 50+7+50 reads, Lane 5 overloaded)
130306_HL146 Tracking FBase Summary 73.1% 12,229,391 (SE 36+7 reads)
130316_HL147 Tracking FBase Summary ? ?
130321_HL148 Tracking FBase Summary 82.8% 11,624,271
130322_Miseq Tracking FBase Summary ? ?
130327_HiSeqMar27 Tracking FBase Summary ? 31,473,118
130402_Miseq Tracking FBase Summary ? ?
130402_HL149 Tracking FBase Summary 81.3% 13,889,196
130409_HL150 Tracking FBase Summary 84.5% 14,929,290
130409_Miseq Tracking FBase Summary ? ?
130430_HL151 Tracking FBase Summary 90.93% 11,274,256
130521_HL152 Tracking FBase Summary ? ?
130528_HL153 Tracking FBase Summary ? ?

2012

Run Tracking 1st Cycle Report Summary % Good Clusters Yield (kbases)
120125_HL113 Tracking FBase Summary 69.61 22900852 (First attempt failed, probably due to bad reagents. The second one was better. However, lane 7&8 still have very poor quality.)
120209_HiseqFeb09 Tracking FBase Summary ? 382,585,278 (@ BioGem)
120210_HL114 Tracking FBase Summary 79.14 25,971,886
120217_HL115 Tracking FBase Summary ? Read 2 Failed, Rehyb unsuccessful, Received illumina replacement
120313_HiseqMar13 Tracking FBase Summary 92.95 318,641,613
120317_HL116 Tracking FBase Summary ? ?
120412_HL117 Tracking FBase Summary ? ? Read 2 Failed kits replaced
120426_HL118 Tracking FBase Summary ? ~50Gb
120503_HiseqMay04 Tracking FBase Summary 95.47 291,670,307
120510_HiseqMay10 Tracking FBase Summary 93.34 347,495,254
120525_HiseqMay25 Tracking FBase Summary 81.77% 260,691,319
120519_HL119 Tracking FBase Summary 55.5% 12,262,059
120531_HiseqMay31 Tracking FBase Summary 90.53% 408,717,804
120531_HL120 Tracking FBase Summary ? ?
120608_HiseqJun08 Tracking FBase Summary 96.99% 172,621,300
120702_HL124 Tracking FBase Summary 88.08 33,307,344

Intensities low for read 3 terminate run early at cycle 168

120712_HL125 Tracking FBase Summary 79.12 16,601,513
120711_HiSeqJul11 Tracking FBase Summary 94.06 301,875,173
120716_HL126 Tracking FBase Summary 80.65 11,488,063
120727_HL127 Tracking FBase Summary 85.67 28,477,248
120807_HL128 Tracking FBase Summary 88.52 14,546,195
120818_HL129 Tracking FBase Summary 74.32 15,944,231
120828_HiSeqAug28 Tracking FBase Summary 90.41 320,114,704
120906_DD004 Tracking FBase Summary 68.85 9,553,625(s1,s2,s3 were underloaded, s8 no cluster)
120917_HL130 Tracking FBase Summary 80.49 6,971,676 (s8 no cluster, replacement received for both runs)
121004_HL131 Tracking FBase Summary 88.95 9,465,433
121017_HL132 Tracking FBase Summary 88.01 9,615,198
121026_HL133 Tracking FBase Summary 88.45 33,030,297
121101_HL134 Tracking FBase Summary 89.09 13,324,015
121108_HL135 Tracking FBase Summary 82.61 25,068,908 (s7 no cluster, line clogged?, replacement received)
121108_HiSeqNov8 Tracking FBase Summary ? ?
121120_HL136 Tracking FBase Summary 57.82 8,626,041 (s1-s7of HL135 & s2 no visible clusters, library issue?)
121130_HL137 Tracking FBase Summary ? ? (s1 no clusters, s2 primer lawn issue, FC reimbursed)
121210_HL137_2 Tracking FBase Summary 75.4 9,607,022
121214_HL138 Tracking FBase Summary ? ?
121218_HL139 Tracking FBase Summary ? ?
121222_HL140 Tracking FBase Summary ? ?(read1 rehyb, 2x36sbs kits replaced)

2011

Run Tracking 1st Cycle Report Summary % Good Clusters Yield (kbases)
110112_HL086 Tracking FBase Summary 90.6 27,432,853
110119_HL087 Tracking FBase Summary 85.44 48,665,171
110303_HL088 Tracking FBase Summary 79.01 23,332,319
110307_HL089 Tracking FBase Summary 87.23 48,487,197
110318_HL090 Tracking FBase Summary 80.98 23,299,776
110323_HL091 Tracking FBase Summary 83 29,265,834
110408_HL092 Tracking FBase Summary 81.22 12,957,480
110417_HL093 Tracking FBase Summary 83.85 19,081,551
110513_HL094 Tracking FBase Summary 80.27 77,575,532
110608_HL095 Tracking FBase Summary 82 24,590,778
110619_HL096 Tracking FBase Summary 85.84 27,172,886 (2nd reads failed)
110626_HL097 Tracking FBase Summary 78.6 25,943,849 (Repeat of HL096)
110714_HL098 Tracking FBase Summary 85.93 51,666,958
110726_HL099 Tracking FBase Summary 74 14,508,606
110811_HL100 Tracking FBase Summary 74 8,597,569
110902_HL101 Tracking FBase Summary 75 15,810,995
110907_HL102 Tracking FBase Summary 65.47 9,448,824
110923_HL103 Tracking FBase Summary 58.64 15,816,673
110929_SN1001(HiSeq) Tracking FBase Summary 90.39 366,883,826
111013_HL105 Tracking FBase Summary 80.5 30,080,124
111019_HL106 Tracking FBase Summary ? ?
111030_HL107 Tracking FBase Summary 65.5 15,508,439
111109_HL108 Tracking FBase Summary 63.4 7,910,991
111112_HL109 Tracking FBase Summary 78.2 54,405,997
111124_HL110 Tracking FBase Summary 78.23 54,405,997 (very low quality for 2nd end)
111207_HL111 Tracking FBase Summary 86.98 391,944,270 (HiSeq PE110)
111222_HL112 Tracking FBase Summary ? Run failed,cracked manifold, kits replaced by illumina

2010

Run Tracking 1st Cycle Report Summary % Good Clusters Yield (kbases)
100101_HL031 Tracking FBase Summary ? Failed, overloaded, focusing laser
100105_HL032 Tracking FBase Summary 61.24 2,940,492
100113_HL033 Tracking FBase Summary ? ?
100117_HL034 Tracking FBase Summary 72.28 6,896,056
100123_HL035 Tracking FBase Summary 74,49 9,045,278
100127_HL036 Tracking FBase Summary 69.07 7,518,218
100221_HL037 Tracking FBase Summary 51.39 5,993,304
100207_HL038 Tracking FBase Summary 82.62 11,587,982
100212_HL039 Tracking FBase Summary 53.7 5,163,203
100219_HL040 Tracking FBase Summary 59.35 6,091,535
100226_HL041 Tracking FBase Summary 71.02 11,153,313
100303_HL042 Tracking FBase Summary 68.17 7,113,883
100305_HL043 Tracking FBase Summary 61.8 8,949,130
100309_HL044 Tracking FBase Summary 73.91 6,019,006
100312_HL045 Tracking FBase Summary 81.68 14,577,361
100318_HL046_2 Tracking FBase Summary 13 Failed(focusing??)
100318_HL046_3 Tracking FBase Summary 36.4 3,481,844(overloaded)
100326_HL047 Tracking FBase Summary 80.56 15,102,359
100329_HL048 Tracking FBase Summary 76.02 6,467,724(38bp,wrong flowcell orientation)
100329_HL048_repeat Tracking FBase Summary 80.94 16,728,503
100329_DD001 Tracking FBase Summary ? Ran 4 complete cycles, ended because of low quality and intensity
100329_DD001_repeat Tracking FBase Summary 87.04 5,765,966(flowcell underloaded)
100411_HL049_2 Tracking FBase Summary 71.04 8,624,535(defective primer lawn)
100415_HL050 Tracking FBase Summary 83.14 13,132,725
100420_HL051 Tracking FBase Summary 89.86 2,839,513
100424_DD002 Tracking FBase Summary Ran 24 cycles, Scott said software restarts at 25th and 50th cycles, and was a connection problem regarding problem with re-accessing the recipe file (primary Run folder was stored in network drive instead of D drive. Intensities were low (below 2000 for all lanes), probably due to using primers not from Illumina.
100425_DD002_reprimed Tracking FBase Summary Reprimed with standard Illumina primers.
100429_HL052 Tracking FBase Summary 85.95 1,175,185
100503_HL053 Tracking FBase Summary 80.52 31,007,707
100514_HL054 Tracking FBase Summary 89.93 32,835,688
100523_HL055 Tracking FBase Summary 83.12 15775525(2nd reads failed, low intensity)
100601_HL056 Tracking FBase Summary 84.17 17,156,595
100605_HL057 Tracking FBase Summary 88.53 6,862,886
100612_HL058 Tracking FBase N/A N/A Overloading and Low Cluster Density
100615_HL058_2 Tracking FBase Summary 62.83 5,242,825
100623_HL059 Tracking FBase N/A ? Failed (Low Cluster Density)
100627_HL060 Tracking FBase Summary ? ?
100630_HL061 Tracking FBase Summary ? Stopped due to low number of clusters
100701_HL061_2 Tracking FBase Summary ? Defected flowcell
100703_HL061_3 Tracking FBase Summary 89.5 11,854,572
100707_HL062 Tracking FBase Summary 91.52 5,171,211
100713_HL063 Tracking FBase Summary 91.19 12,767,919
100717_HL064 Tracking FBase Summary 87.4 11,306,633
100721_HL065 Tracking FBase Summary 87.48 12,959,289
100726_HL066 Tracking FBase Summary 61.5 9,875,407 (Low yield due to bad focusing, mainly on lane 5)
100802_HL067 Tracking FBase Summary 64.16 5,816,951 (Overloaded lane 1 & 2 due to underestimation of library concentration)
100807_HL068 Tracking FBase Summary 87.07 10,732,349
100814_HL069 Tracking FBase Summary 77.39 8,878,272
100817_HL070 Tracking FBase Summary 90.53 10,797,519
100825_HL071 Tracking FBase Summary 83.15 11,955,485
100913_HL072 Tracking FBase Summary 86.49 4,533,300 (No Clusters on lane 7 & 8)
100917_HL073 Tracking FBase Summary 86.46 6,258,409
100921_HL074 Tracking FBase Summary 81.22 10,415,353
100925_HL075 Tracking FBase Summary 80.98 29,364,373
101006_HL076 Tracking FBase Summary 87.84 8,005,306
100810_DD003 Tracking FBase Summary 89.08 12821744
100812_AL009 Tracking FBase Summary 86.91 15,843,582
101016_HL077 Tracking FBase Summary 86.02 16,771,454
101021_HL078 Tracking FBase Summary ? ?
101026_HL079 Tracking FBase Summary 61.61 12,414,871
101030_HL080 Tracking FBase Summary 78.26 13,909,754
101108_HL081 Tracking FBase Summary 86.06 43,250,579
101117_HL082 Tracking FBase Summary 81.99 19,504,189
101123_HL083 Tracking FBase Summary 87.92 45,478,237
101203_HL084 Tracking FBase Summary 87.07 21,585,694
101209_HL085 Tracking FBase Summary 86.69 45,305,249

2009

Run Tracking 1st Cycle Report Summary % Good Clusters Yield (kbases)
090721_PhiX_Test_Run Tracking FBase Summary 81.13 3892642
090724_HL001 Tracking FBase Summary 68.99 1729242
090728_HL002 Tracking FBase Summary 67.11 3731327
090805_HL003 Tracking FBase Summary 45.69 3159793
090809_HL004 Tracking FBase Summary 78.26 5806800
090813_HL005 Tracking FBase Summary 38.78 2159875
090816_HL006 Tracking FBase Summary 36.55 2486386
090819_HL007 Tracking N/A N/A N/A 4325020
090826_HL008 Tracking FBase Summary 56.94 4113170
090829_HL009 Tracking FBase Summary Failed
090911_AL001 Tracking - - 41.8 2135001
090918_AL002 Tracking - - 61.54 4,249,626
090923_AL003 Tracking FBase Summary 75.3 5,400,896
090925_HL010 Tracking FBase Summary 61.15 4,676,112
090929_HL011 Tracking FBase Summary 19.14(failed) 1,484,042
090930_HL012 Tracking FBase Summary 79.06 5598506
091008_HL013 Tracking FBase Summary 61.41 4,172,506
091012_HL014 Tracking FBase Summary 55.88 2,788,276
091015_HL015 Tracking FBase Summary 52.03 4,521,421
091018_HL016 Tracking FBase Summary 67.06 5,059,724
091020_HL017 Tracking FBase Summary 68.46 5,633,145
091023_HL018 Tracking FBase Summary 67.73 5,318,108
091026_HL019 Tracking FBase Summary 60.57 4,205,872
091029_HL020 Tracking FBase Summary 76.22 7,769,646
091102_HL021 Tracking FBase Summary Failed Failed
091110_HL022 Tracking - Summary 68.03 5,161,713
091113_HL023 Tracking FBase Summary 80.97 7,083,662
091119_HL024 Tracking FBase Summary 82.8 5,046,487
091123_HL025 Tracking FBase Summary 68.39 5,727,128
091127_HL026 Tracking FBase Summary 82.27 7,045,934
091202_HL027 Tracking FBase Summary 82.46 6,017,845
091206_HL028 Tracking FBase Summary 55.12 3,446,764
091208_HL029 Tracking FBase Summary 72.26 6,151,726
091212_AL005 Tracking - Summary 9.94 505,765
091217_AL006 Tracking FBase Summary 74.95 6566654
091217_AL007 Tracking FBase Summary 35.92 2638947
091217_AL008 Tracking FBase Summary 27.76 2,197,558(failed, overloaded, focusing laser)
091229_HL030 Tracking FBase Summary 84.94 6,385,095