Athurva Gore/LabNotes/2009-8-19
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Probeset Upload
- 18 bp SNP ProbeSet (cDNA version)
- Dr. Lee Probesets (18 bp SNP, cDNA)
- Baylor Probesets
- http://genome-tech.ucsd.edu/LabNotes/upload/5/50/PROBESET_Baylor_RPLCACRD_output_final.txt
- http://genome-tech.ucsd.edu/LabNotes/index.php/Image:PROBESET_Baylor_KKESH72_output_final.txt
- http://genome-tech.ucsd.edu/LabNotes/upload/1/1b/PROBESET_Baylor_FlyDup936_output_final.txt
- http://genome-tech.ucsd.edu/LabNotes/upload/9/9d/PROBESET_Baylor_FlyDup901_output_final.txt
- FLYDUP5279 is still running on genome-tech
- More details on each probeset will be added shortly
Analyzing False Positives
- G-A bias? Check, Rob noticed it in his data
IPS and Cancer
Classifying SNPs
- Can we remove false positives with an algorithm?