Revision as of 18:56, 22 March 2012 by >Noi
Current Projects
- Targeted bisulfite sequencing
- Schizophrenia (UCLA, Roel Ophoff):
- BSPP capture: [[1]]
- Mapping
- Sample identity check by Dinh (checked after combining three batches of sequencing data):
- Homozygous SNPs and heterozygous SNPs call for X chromosome to identify males vs. females: [[3]]
- Genetic distance: [[4]]
- Mid-parent offspring (mpo) analysis
- Preliminary result by Dr. Zhang: [[5]]
- Analysis of combining data (4 batches of sequencing data): [[6]]
- mQTL analysis: [[7]]
- ASM analysis: [[8]]
- Regression analysis:
- Geographic Astrophy (GA) (UCSD, Kang Zhang) Note: most of the data analysis was performed by Dr. Zhang and Dinh
- BSPP capture: [[9]] --> note: this experiment failed in amplification step [[10]]
- Regression analysis by Dr. Zhang: [[11]]
- HAPMAP project (HAPMAP PT01, two families, 1362 and 1464)
- BSPP capture:
- Mapping statistic: [[12]]
- ASM analysis:
- Preliminary analysis of sequence-dependent ASM: [[13]]
- Sequence dependent test by Dinh: [[14]]
- Randomly tagging primers (with Athurva and Dinh)
- PCR condition optimization: [[15]] [[16]] [[17]] [[18]]
- Colony PCR and sequence verification by Sanger's sequencing: [[19]] [[20]]
2012
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2011
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2010
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date=2010/10/01
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