Sam:LabNotes/Microbiome-new/2011-4-19
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Recruit metagenomic contigs using mouse SAG contigs as baits - BLATing approach
Objective
- Extract more contigs from metagenomic data into mouse GI microbiome SAG data.
- If this approach is working, the increased data amount will help us to extend SAG contig length and build up genome of unknown bacteria.
Background
- I did BLATing test and found that BLAT can working either 1 string reference genome or multiple sequence references.
- We The pre