Daniel:Notebook/GenomeMiner/2013-9-25
Jump to navigation
Jump to search
Mock HL155 (Started 9/9/2013)
Mimic Data Using Short Reference (BWA)
Error Counting Results
Error Rate: 1.177% Error Rate of Insertions: 0.195% Error Rate of Deletions: 1.42e-06% Error Rate of Substitutions: 0.982%
Overview of Recent Results
Comparing Real Data
File:ProbeComparison Improved.png|File:AgilentMYCA ErrorComp090313.png |
Left: Uses full length reference file; Right: uses shortened reference files
Comparing Bowtie and BWA Reference File Length Data
Retrospective
Given what we know now (that deletions are seriously undercounted using shortened reference files)