Kun:LabNotes/MONOD/2014-6-16

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Analysis of the 140613_MiSeq data set

  • Noi performed capture of 15 samples (Serum/tumor DNA from Pancreatic cancer patients, plasma from normal controls) using the MONOD V1N3 probe set:Noi/NOTES/2014-6-10
  • A MiSeq run (151+6+151bp) was performed on this batch of libraries. Data folder: /home/kunzhang/seqStore/20140613_MiSeq

Low-level analysis

  • A sample info sheet and a batch processing script was generated.
  • All 15 data sets were mapped and the haploInfo files were generated.