Daniel:Notebook/HiResChrPaint/2014-6-24

From ZhangLabWiki
Revision as of 22:24, 24 June 2014 by >Djacobse
Jump to navigation Jump to search

Probe Design (Started 06/17/2014)

Back to Calendar

Probe Mining

Well, it started Friday, but at some point over the weekend my probe mining finished. There are 2 GB of 60 bp oligos, amounting to approximately 40k potential sequences. Now I should be able to run Oligopaints scripts on them in order to generate probe files of the desired sequences/properties.

  1. Clean oligo.txt file to make it into a bed file
    1. python ../../Probe_Design/bin/clean_file.py