Chris:LabNotes/General Protocols/BaseCalling Procedure

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Revision as of 00:20, 14 May 2015 by >Cjwei (Created page with "=Illumina Demultiplexing Procedure= *Below is a procedure to take the raw basecall data from an Illumina run and output fastq files for all specified indices ==Download Data f...")
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Illumina Demultiplexing Procedure

  • Below is a procedure to take the raw basecall data from an Illumina run and output fastq files for all specified indices

Download Data from Basespace

Basecalling using bcl2fastq

  • Once we have the raw data, we next want to demultiplex