Chris:LabNotes/Microbiome/2011/2011-1-31
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MG-RAST Results[edit]
Background[edit]
- Sent in sample from 101123_HL083_NP-SAG-MouseGutSetB-Nov4_ID1 for a test
Procedure[edit]
- Performed assembly using ABySS on raw reads from Batch B (no trimming)
- kmer=27
- Did not do any trimming of reads or of assembly contig file
Results[edit]
- See MG-RAST website
- Sam already did March02 dataset -> so I will just continue using MG-RAST on batch A and B