Daniel:Experiments-HRCP
Experiment Lists-High Resolution Chromosome Painting[edit]
This page lists various experiments performed for the High Resolution Chromosome Painting project. The list is divided into category of experiment, followed by experiment, with a list of notebook entries for that experiment. The dates in parentheses are the original start date of the experiment.
- Note: the categorization currently only dates back to experiments performed after 02/08/2014
FISH[edit]
Slide FISH[edit]
<dynamicpagelist> category=HRCP category=20140919 </dynamicpagelist>
FISH with Padlock Probes II[edit]
<dynamicpagelist> category=HRCP category=20140909 </dynamicpagelist>
FISH with Padlock Probes[edit]
<dynamicpagelist> category=HRCP category=20140813 </dynamicpagelist>
FISH with DAPI (Dystrophin)[edit]
Using DAPI instead of DRAQ5 as nuclear stain, DRAQ5 may interfere with other fluorophores.
<dynamicpagelist> category=HRCP category=08102014 </dynamicpagelist>
No Wash FISH[edit]
<dynamicpagelist> category=HRCP category=20140805 </dynamicpagelist>
Dystrophin[edit]
First experiment with the dystrophin oligo set I ordered from IDT.
<dynamicpagelist> category=HRCP category=20140718 </dynamicpagelist>
Strand Control[edit]
FISH experiment including the return of using single stranded probes (requires more input to use double stranded probes but there is less processing time, and the low yield of processing makes it possibly more economical).
<dynamicpagelist> category=HRCP category=20140708 </dynamicpagelist>
70% Formamide Hybridization (06-30-2014)[edit]
<dynamicpagelist> category=HRCP category=20140630 </dynamicpagelist>
Overload FISH (03-05-2014)[edit]
FISH experiment using large amount of probe
<dynamicpagelist> category=HRCP category=20140305 </dynamicpagelist>
Multi-Color FISH (02-08-2014)[edit]
FISH experiment using 2 colors of probes for positive control and sample.
<dynamicpagelist> category=HRCP category=20140208 </dynamicpagelist>
Probe Design[edit]
Probe Mining-OligoArray (06-16-2014)[edit]
<dynamicpagelist> category=HRCP category=Probe Mining category=OligoArray </dynamicpagelist>
Probe Mining-Zhang Scripts (07-02-2014)[edit]
<dynamicpagelist> category=HRCP category=Probe Mining category=ZhangProbeDesign </dynamicpagelist>
Probe Mining-Stellaris (07-10-2014)[edit]
<dynamicpagelist> category=HRCP category=Probe Mining category=Stellaris </dynamicpagelist>