Daniel:Notebook/GenomeMiner/2013-9-26
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Mock HL155 (Started 9/9/2013)[edit]
More BWA Align[edit]
Checking a few more bwa alignments that might yield interesting results. In this case I'm checking the 1 per read error data.
Error Counting Results (1 Error per Read, Full Reference Sequence)[edit]
Error Rate: 1.35% Error Rate of Insertions: 0.221% Error Rate of Deletions: 0.041% Error Rate of Substitutions: 1.09% Alignment %: 99.77%
Error Counting Results (1 Error per Read, Short Reference Sequence)[edit]
Error Rate: 1.30% Error Rate of Insertions: 0.226 Error Rate of Deletions: 0 Error Rate of Substitutions: 1.07% Alignment: 96.75%