Jeff:LabNotes/Hi Seq 9/12/12

From ZhangLabWiki
Jump to navigation Jump to search

Hi Seq Run: SN1001[edit]

  • Data in/home/kunzhang/seqStore/120906_SN1001/Jeff
  • Assemblies in ~/JG_Ext12T/SN1001_Hiseq/assembly/Indx* (Indx 38 assembly just in assembly folder)
  • Used kmer=21 in Velvet_SC with Euler_EC
Lane 4
Index type
37 skin
38 skin
27 sea
31 chr
32 chr
33 neu
34 neu
35 nn
36 nn
42 chr
45 neu
46 neu
Lane 5
Index Type
27 sea
30 ch
31 neu
32 neu
33 nn
34 nn
39 skin
40 sea
47 nn
48 nn