Kun:LabNotes/ExonomeSeq/2009-8-2

From ZhangLabWiki
Jump to navigation Jump to search

Relative abundance of targets in several recent shotgun libraries[edit]

The values are median abundance of all targets in each set.

Probe sets PGP5 PGP7 0721_lib 0602/0619 PGP8 PGP9 0610/0611
Jan09:1-5(not in #6-7) 14 14 16 8 10 7 11
Jan09:6 8 11 6 2 2 1 2
Jan09:7 12 17 11 3 4 2 2
Mar09R2 3 5 3 1 2 1 1
MAR09R3 11 21.5 11 7 6 4 8
  • Lessons learned:
    • Increase the relative concentration of Mar09 R2 by 5-fold compared with Mar09 R3.
    • Increase the relative concentration of Jan09 #6 by 2-fold compared with Jan09 #7