Matt:LabNotes/2014-4-16

From ZhangLabWiki
Jump to navigation Jump to search

Assign number of padlock probes to each "Partial Barcode"[edit]

  • Hosuk did decoding on Agi26k0gap in situ capture of PGP1f
    • The padlock probes are designed to use 7 stages of 3 dyes but we only have 10 dye-probes (first 2 dyes for each of first 5 stages)
  • I wrote a script PartialDecodeBarcode.pl to determine how many padlock probes correspond to each "partial barcode": PartialDecode5step