Noi/NOTES/2014-8-24

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Summary of RRBS & WGBS libraries generated from plasma DNA[edit]

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No Generated by Samples # of libraries Fragmentedby End-repaired Sequenced
1 RRBS Normal plasma DNA from Kang Zhang's lab 10 MspI dA:dC:dG YES
2 RRBS Plasma DNA from pancreatic cancer patients 10 MspI dA:dC:dG YES
3 RRBS Plasma DNA fromcolon cancer patients 10 MspI dA:dC:dG YES
4 RRBS Plasma DNA from lung cancer patients 10 MspI dA:dC:dG YES
5 RRBS Normal plasma DNA from Kang Zhang's lab 18 MspI/TaqI dA:dC:dG No
6 WGBS Plasma DNA from pancreatic cancer patients 8 No dA:dC:dG No
7 WGBS Plasma DNA fromcolon cancer patients 8 No dA:dC:dG No
8 WGBS Plasma DNA from lung cancer patients 8 No dA:dC:dG No
9 WGBS Normal plasma DNA from KangZhang's lab 24 No dA:dT:dG:dC No
10 WGBS Plasma DNA from pancreatic cancer patients 8 No dA:dT:dG:dC No
11 WGBS Plasma DNA fromcolon cancer patients 8 No dA:dT:dG:dC No
12 WGBS Plasma DNA from lung cancer patients 8 No dA:dT:dG:dC No

Note:

- Samples in 1 and 5 do not overlap