Information regarding r2 statistics across all cell lines

1) Empirical CDF of r2 values across all CpGs with adequate read depth (10x). r2=.3 is shown by a blue vertical line.



2) Empirical CDF of lengths of candidate LD blocks. Candidate LD blocks includes all CpGs pairs whose r2 > .3. The vertical blue line represents 100 bp. Candidate LD blocks spanning more than 100 bp are labeled LD blocks.


3) Empirical CDF of CpG Counts within candidate LD Blocks. The vertical blue represents 10 CpGs. Candidate LD blocks containing more than 10 CpGs are used in our analysis.