r2 Matrix (?)
CpG Pair 1 | CpG Pair 2 | Distance | TT Count | TC Count | T* Count | CT Count | CC Count | C* Count | *T Count | *C Count | R Value | mafA | mafB |
4689795 | 4689798 | 3 | 124 | 60 | 184 | 53 | 152 | 205 | 177 | 212 | 0.42 | 0.47 | 0.46 |
4689795 | 4689811 | 16 | 51 | 84 | 135 | 10 | 136 | 146 | 61 | 220 | 0.38 | 0.48 | 0.22 |
4689795 | 4689813 | 18 | 28 | 98 | 126 | 8 | 127 | 135 | 36 | 225 | 0.24 | 0.48 | 0.14 |
4689795 | 4689832 | 37 | 7 | 5 | 12 | 0 | 16 | 16 | 7 | 21 | 0.67 | 0.43 | 0.25 |
4689798 | 4689811 | 13 | 49 | 93 | 142 | 17 | 145 | 162 | 66 | 238 | 0.29 | 0.47 | 0.22 |
4689798 | 4689813 | 15 | 32 | 97 | 129 | 6 | 148 | 154 | 38 | 245 | 0.30 | 0.46 | 0.13 |
4689798 | 4689816 | 18 | 25 | 90 | 115 | 2 | 143 | 145 | 27 | 233 | 0.33 | 0.44 | 0.10 |
4689798 | 4689832 | 34 | 9 | 11 | 20 | 3 | 27 | 30 | 12 | 38 | 0.40 | 0.40 | 0.24 |
4689811 | 4689813 | 2 | 34 | 46 | 80 | 16 | 236 | 252 | 50 | 282 | 0.43 | 0.24 | 0.15 |
4689811 | 4689816 | 5 | 35 | 40 | 75 | 4 | 230 | 234 | 39 | 270 | 0.58 | 0.24 | 0.13 |
4689811 | 4689832 | 21 | 24 | 7 | 31 | 4 | 67 | 71 | 28 | 74 | 0.74 | 0.30 | 0.27 |
4689811 | 4689841 | 30 | 10 | 6 | 16 | 7 | 16 | 23 | 17 | 22 | 0.32 | 0.41 | 0.44 |
4689811 | 4689849 | 38 | 2 | 0 | 2 | 0 | 9 | 9 | 2 | 9 | 1.00 | 0.18 | 0.18 |
4689813 | 4689816 | 3 | 28 | 18 | 46 | 14 | 259 | 273 | 42 | 277 | 0.58 | 0.14 | 0.13 |
4689813 | 4689832 | 19 | 18 | 4 | 22 | 12 | 76 | 88 | 30 | 80 | 0.61 | 0.20 | 0.27 |
4689813 | 4689841 | 28 | 9 | 3 | 12 | 11 | 25 | 36 | 20 | 28 | 0.39 | 0.25 | 0.42 |
4689813 | 4689849 | 36 | 2 | 2 | 4 | 2 | 13 | 15 | 4 | 15 | 0.37 | 0.21 | 0.21 |
4689816 | 4689832 | 16 | 24 | 2 | 26 | 8 | 80 | 88 | 32 | 82 | 0.78 | 0.23 | 0.28 |
4689816 | 4689841 | 25 | 11 | 3 | 14 | 10 | 27 | 37 | 21 | 30 | 0.47 | 0.27 | 0.41 |
4689816 | 4689849 | 33 | 4 | 1 | 5 | 1 | 15 | 16 | 5 | 16 | 0.74 | 0.24 | 0.24 |
4689832 | 4689841 | 9 | 28 | 9 | 37 | 9 | 46 | 55 | 37 | 55 | 0.59 | 0.40 | 0.40 |
4689832 | 4689849 | 17 | 16 | 9 | 25 | 4 | 33 | 37 | 20 | 42 | 0.56 | 0.40 | 0.32 |
4689832 | 4689864 | 32 | 7 | 5 | 12 | 1 | 17 | 18 | 8 | 22 | 0.58 | 0.40 | 0.27 |
4689832 | 4689866 | 34 | 4 | 2 | 6 | 2 | 12 | 14 | 6 | 14 | 0.52 | 0.30 | 0.30 |
4689841 | 4689849 | 8 | 24 | 10 | 34 | 5 | 64 | 69 | 29 | 74 | 0.66 | 0.33 | 0.28 |
4689841 | 4689864 | 23 | 13 | 7 | 20 | 2 | 46 | 48 | 15 | 53 | 0.67 | 0.29 | 0.22 |
4689841 | 4689866 | 25 | 13 | 2 | 15 | 6 | 38 | 44 | 19 | 40 | 0.68 | 0.25 | 0.32 |
4689849 | 4689864 | 15 | 16 | 6 | 22 | 8 | 71 | 79 | 24 | 77 | 0.61 | 0.22 | 0.24 |
4689849 | 4689866 | 17 | 18 | 1 | 19 | 12 | 61 | 73 | 30 | 62 | 0.68 | 0.21 | 0.33 |
4689864 | 4689866 | 2 | 20 | 5 | 25 | 19 | 87 | 106 | 39 | 92 | 0.53 | 0.19 | 0.30 |