r2 Matrix (?)
CpG Pair 1 | CpG Pair 2 | Distance | TT Count | TC Count | T* Count | CT Count | CC Count | C* Count | *T Count | *C Count | R Value | mafA | mafB |
52759584 | 52759589 | 5 | 4 | 1 | 5 | 3 | 15 | 18 | 7 | 16 | 0.57 | 0.22 | 0.30 |
52759584 | 52759602 | 18 | 5 | 0 | 5 | 11 | 7 | 18 | 16 | 7 | 0.35 | 0.22 | 0.30 |
52759589 | 52759602 | 13 | 7 | 0 | 7 | 9 | 7 | 16 | 16 | 7 | 0.44 | 0.30 | 0.30 |
52759644 | 52759651 | 7 | 51 | 31 | 82 | 54 | 265 | 319 | 105 | 296 | 0.41 | 0.20 | 0.26 |
52759644 | 52759655 | 11 | 23 | 18 | 41 | 10 | 266 | 276 | 33 | 284 | 0.58 | 0.13 | 0.10 |
52759644 | 52759718 | 74 | 13 | 0 | 13 | 65 | 44 | 109 | 78 | 44 | 0.26 | 0.11 | 0.36 |
52759651 | 52759668 | 17 | 49 | 8 | 57 | 54 | 173 | 227 | 103 | 181 | 0.52 | 0.20 | 0.36 |
52759651 | 52759679 | 28 | 26 | 6 | 32 | 29 | 61 | 90 | 55 | 67 | 0.43 | 0.26 | 0.45 |
52759651 | 52759683 | 32 | 17 | 5 | 22 | 15 | 49 | 64 | 32 | 54 | 0.49 | 0.26 | 0.37 |
52759651 | 52759686 | 35 | 10 | 2 | 12 | 18 | 19 | 37 | 28 | 21 | 0.30 | 0.24 | 0.43 |
52759651 | 52759694 | 43 | 1 | 3 | 4 | 4 | 5 | 9 | 5 | 8 | -0.18 | 0.31 | 0.38 |
52759651 | 52759698 | 47 | 2 | 2 | 4 | 7 | 3 | 10 | 9 | 5 | -0.19 | 0.29 | 0.36 |
52759651 | 52759704 | 53 | 8 | 4 | 12 | 10 | 13 | 23 | 18 | 17 | 0.22 | 0.34 | 0.49 |
52759651 | 52759712 | 61 | 18 | 3 | 21 | 22 | 23 | 45 | 40 | 26 | 0.35 | 0.32 | 0.39 |
52759651 | 52759715 | 64 | 17 | 6 | 23 | 25 | 22 | 47 | 42 | 28 | 0.20 | 0.33 | 0.40 |
52759651 | 52759718 | 67 | 24 | 2 | 26 | 31 | 22 | 53 | 55 | 24 | 0.35 | 0.33 | 0.30 |
52759651 | 52759759 | 108 | 2 | 6 | 8 | 8 | 31 | 39 | 10 | 37 | 0.04 | 0.17 | 0.21 |
52759655 | 52759704 | 49 | 2 | 0 | 2 | 6 | 8 | 14 | 8 | 8 | 0.38 | 0.12 | 0.50 |
52759655 | 52759718 | 63 | 6 | 0 | 6 | 32 | 18 | 50 | 38 | 18 | 0.24 | 0.11 | 0.32 |
52759668 | 52759679 | 11 | 85 | 41 | 126 | 72 | 129 | 201 | 157 | 170 | 0.31 | 0.39 | 0.48 |
52759668 | 52759683 | 15 | 69 | 38 | 107 | 31 | 150 | 181 | 100 | 188 | 0.48 | 0.37 | 0.35 |
52759668 | 52759686 | 18 | 67 | 22 | 89 | 65 | 96 | 161 | 132 | 118 | 0.34 | 0.36 | 0.47 |
52759668 | 52759694 | 26 | 31 | 12 | 43 | 52 | 35 | 87 | 83 | 47 | 0.12 | 0.33 | 0.36 |
52759668 | 52759698 | 30 | 21 | 3 | 24 | 38 | 13 | 51 | 59 | 16 | 0.15 | 0.32 | 0.21 |
52759668 | 52759704 | 36 | 9 | 3 | 12 | 10 | 9 | 19 | 19 | 12 | 0.22 | 0.39 | 0.39 |
52759668 | 52759712 | 44 | 4 | 3 | 7 | 7 | 5 | 12 | 11 | 8 | -0.01 | 0.37 | 0.42 |
52759668 | 52759715 | 47 | 8 | 2 | 10 | 9 | 4 | 13 | 17 | 6 | 0.12 | 0.43 | 0.26 |
52759668 | 52759718 | 50 | 7 | 5 | 12 | 15 | 2 | 17 | 22 | 7 | -0.34 | 0.41 | 0.24 |
52759668 | 52759759 | 91 | 4 | 31 | 35 | 14 | 52 | 66 | 18 | 83 | -0.12 | 0.35 | 0.18 |
52759668 | 52759766 | 98 | 4 | 22 | 26 | 9 | 40 | 49 | 13 | 62 | -0.04 | 0.35 | 0.17 |
52759668 | 52759775 | 107 | 2 | 8 | 10 | 13 | 11 | 24 | 15 | 19 | -0.31 | 0.29 | 0.44 |
52759679 | 52759683 | 4 | 108 | 91 | 199 | 36 | 193 | 229 | 144 | 284 | 0.41 | 0.46 | 0.34 |
52759679 | 52759686 | 7 | 141 | 39 | 180 | 62 | 149 | 211 | 203 | 188 | 0.49 | 0.46 | 0.48 |
52759679 | 52759694 | 15 | 101 | 24 | 125 | 72 | 73 | 145 | 173 | 97 | 0.32 | 0.46 | 0.36 |
52759679 | 52759698 | 19 | 89 | 12 | 101 | 65 | 50 | 115 | 154 | 62 | 0.35 | 0.47 | 0.29 |
52759679 | 52759704 | 25 | 60 | 17 | 77 | 21 | 71 | 92 | 81 | 88 | 0.55 | 0.46 | 0.48 |
52759679 | 52759712 | 33 | 36 | 4 | 40 | 13 | 25 | 38 | 49 | 29 | 0.58 | 0.49 | 0.37 |
52759679 | 52759715 | 36 | 20 | 1 | 21 | 10 | 14 | 24 | 30 | 15 | 0.57 | 0.47 | 0.33 |
52759679 | 52759718 | 39 | 12 | 1 | 13 | 6 | 7 | 13 | 18 | 8 | 0.50 | 0.50 | 0.31 |
52759679 | 52759759 | 80 | 11 | 36 | 47 | 7 | 41 | 48 | 18 | 77 | 0.11 | 0.49 | 0.19 |
52759679 | 52759766 | 87 | 7 | 32 | 39 | 8 | 33 | 41 | 15 | 65 | -0.02 | 0.49 | 0.19 |
52759679 | 52759775 | 96 | 12 | 9 | 21 | 10 | 16 | 26 | 22 | 25 | 0.19 | 0.45 | 0.47 |
52759683 | 52759686 | 3 | 133 | 23 | 156 | 106 | 196 | 302 | 239 | 219 | 0.48 | 0.34 | 0.48 |
52759683 | 52759694 | 11 | 95 | 19 | 114 | 125 | 101 | 226 | 220 | 120 | 0.28 | 0.34 | 0.35 |
52759683 | 52759698 | 15 | 84 | 12 | 96 | 115 | 74 | 189 | 199 | 86 | 0.27 | 0.34 | 0.30 |
52759683 | 52759704 | 21 | 61 | 20 | 81 | 46 | 109 | 155 | 107 | 129 | 0.43 | 0.34 | 0.45 |
52759683 | 52759712 | 29 | 45 | 6 | 51 | 49 | 46 | 95 | 94 | 52 | 0.36 | 0.35 | 0.36 |
52759683 | 52759715 | 32 | 35 | 10 | 45 | 30 | 37 | 67 | 65 | 47 | 0.33 | 0.40 | 0.42 |
52759683 | 52759718 | 35 | 17 | 4 | 21 | 19 | 19 | 38 | 36 | 23 | 0.30 | 0.36 | 0.39 |
52759683 | 52759759 | 76 | 5 | 27 | 32 | 12 | 47 | 59 | 17 | 74 | -0.06 | 0.35 | 0.19 |
52759683 | 52759766 | 83 | 6 | 19 | 25 | 11 | 43 | 54 | 17 | 62 | 0.04 | 0.32 | 0.22 |
52759683 | 52759775 | 92 | 5 | 10 | 15 | 23 | 18 | 41 | 28 | 28 | -0.20 | 0.27 | 0.50 |
52759686 | 52759694 | 8 | 162 | 37 | 199 | 108 | 110 | 218 | 270 | 147 | 0.33 | 0.48 | 0.35 |
52759686 | 52759698 | 12 | 141 | 29 | 170 | 121 | 72 | 193 | 262 | 101 | 0.23 | 0.47 | 0.28 |
52759686 | 52759704 | 18 | 106 | 41 | 147 | 34 | 133 | 167 | 140 | 174 | 0.52 | 0.47 | 0.45 |
52759686 | 52759712 | 26 | 91 | 15 | 106 | 32 | 85 | 117 | 123 | 100 | 0.59 | 0.48 | 0.45 |
52759686 | 52759715 | 29 | 67 | 18 | 85 | 35 | 67 | 102 | 102 | 85 | 0.45 | 0.45 | 0.45 |
52759686 | 52759718 | 32 | 46 | 10 | 56 | 30 | 49 | 79 | 76 | 59 | 0.44 | 0.41 | 0.44 |
52759686 | 52759759 | 73 | 14 | 32 | 46 | 3 | 33 | 36 | 17 | 65 | 0.27 | 0.44 | 0.21 |
52759686 | 52759766 | 80 | 10 | 29 | 39 | 7 | 28 | 35 | 17 | 57 | 0.07 | 0.47 | 0.23 |
52759686 | 52759775 | 89 | 15 | 16 | 31 | 13 | 14 | 27 | 28 | 30 | 0.00 | 0.47 | 0.48 |
52759694 | 52759698 | 4 | 231 | 59 | 290 | 110 | 69 | 179 | 341 | 128 | 0.20 | 0.38 | 0.27 |
52759694 | 52759704 | 10 | 152 | 109 | 261 | 45 | 115 | 160 | 197 | 224 | 0.29 | 0.38 | 0.47 |
52759694 | 52759712 | 18 | 139 | 65 | 204 | 45 | 80 | 125 | 184 | 145 | 0.31 | 0.38 | 0.44 |
52759694 | 52759715 | 21 | 117 | 61 | 178 | 47 | 69 | 116 | 164 | 130 | 0.25 | 0.39 | 0.44 |
52759694 | 52759718 | 24 | 95 | 45 | 140 | 40 | 61 | 101 | 135 | 106 | 0.28 | 0.42 | 0.44 |
52759694 | 52759759 | 65 | 7 | 30 | 37 | 2 | 10 | 12 | 9 | 40 | 0.03 | 0.24 | 0.18 |
52759694 | 52759766 | 72 | 13 | 23 | 36 | 0 | 15 | 15 | 13 | 38 | 0.38 | 0.29 | 0.25 |
52759694 | 52759775 | 81 | 19 | 16 | 35 | 7 | 7 | 14 | 26 | 23 | 0.04 | 0.29 | 0.47 |
52759694 | 52759801 | 107 | 3 | 5 | 8 | 1 | 2 | 3 | 4 | 7 | 0.04 | 0.27 | 0.36 |
52759698 | 52759704 | 6 | 187 | 141 | 328 | 17 | 104 | 121 | 204 | 245 | 0.38 | 0.27 | 0.45 |
52759698 | 52759712 | 14 | 168 | 95 | 263 | 29 | 64 | 93 | 197 | 159 | 0.29 | 0.26 | 0.45 |
52759698 | 52759715 | 17 | 154 | 80 | 234 | 22 | 64 | 86 | 176 | 144 | 0.36 | 0.27 | 0.45 |
52759698 | 52759718 | 20 | 119 | 76 | 195 | 31 | 41 | 72 | 150 | 117 | 0.16 | 0.27 | 0.44 |
52759698 | 52759759 | 61 | 7 | 18 | 25 | 1 | 6 | 7 | 8 | 24 | 0.13 | 0.22 | 0.25 |
52759698 | 52759766 | 68 | 9 | 16 | 25 | 2 | 8 | 10 | 11 | 24 | 0.16 | 0.29 | 0.31 |
52759698 | 52759775 | 77 | 15 | 10 | 25 | 5 | 8 | 13 | 20 | 18 | 0.20 | 0.34 | 0.47 |
52759698 | 52759801 | 103 | 5 | 9 | 14 | 0 | 9 | 9 | 5 | 18 | 0.42 | 0.39 | 0.22 |
52759704 | 52759712 | 8 | 163 | 30 | 193 | 65 | 148 | 213 | 228 | 178 | 0.54 | 0.48 | 0.44 |
52759704 | 52759715 | 11 | 153 | 22 | 175 | 51 | 144 | 195 | 204 | 166 | 0.61 | 0.47 | 0.45 |
52759704 | 52759718 | 14 | 116 | 29 | 145 | 72 | 100 | 172 | 188 | 129 | 0.39 | 0.46 | 0.41 |
52759704 | 52759759 | 55 | 5 | 7 | 12 | 1 | 9 | 10 | 6 | 16 | 0.35 | 0.45 | 0.27 |
52759704 | 52759766 | 62 | 8 | 6 | 14 | 2 | 12 | 14 | 10 | 18 | 0.45 | 0.50 | 0.36 |
52759704 | 52759775 | 71 | 13 | 3 | 16 | 6 | 15 | 21 | 19 | 18 | 0.52 | 0.43 | 0.49 |
52759704 | 52759801 | 97 | 8 | 7 | 15 | 2 | 19 | 21 | 10 | 26 | 0.48 | 0.42 | 0.28 |
52759704 | 52759812 | 108 | 4 | 6 | 10 | 1 | 11 | 12 | 5 | 17 | 0.38 | 0.45 | 0.23 |
52759704 | 52759817 | 113 | 3 | 4 | 7 | 1 | 6 | 7 | 4 | 10 | 0.32 | 0.50 | 0.29 |
52759712 | 52759715 | 3 | 181 | 54 | 235 | 52 | 137 | 189 | 233 | 191 | 0.49 | 0.45 | 0.45 |
52759712 | 52759718 | 6 | 157 | 42 | 199 | 64 | 108 | 172 | 221 | 150 | 0.42 | 0.46 | 0.40 |
52759712 | 52759759 | 47 | 2 | 4 | 6 | 0 | 5 | 5 | 2 | 9 | 0.43 | 0.45 | 0.18 |
52759712 | 52759766 | 54 | 6 | 2 | 8 | 3 | 6 | 9 | 9 | 8 | 0.42 | 0.47 | 0.47 |
52759712 | 52759775 | 63 | 10 | 3 | 13 | 6 | 7 | 13 | 16 | 10 | 0.32 | 0.50 | 0.38 |
52759712 | 52759801 | 89 | 9 | 14 | 23 | 4 | 12 | 16 | 13 | 26 | 0.15 | 0.41 | 0.33 |
52759712 | 52759812 | 100 | 5 | 11 | 16 | 1 | 10 | 11 | 6 | 21 | 0.26 | 0.41 | 0.22 |
52759712 | 52759817 | 105 | 3 | 7 | 10 | 1 | 7 | 8 | 4 | 14 | 0.21 | 0.44 | 0.22 |
52759715 | 52759718 | 3 | 170 | 41 | 211 | 61 | 112 | 173 | 231 | 153 | 0.46 | 0.45 | 0.40 |
52759715 | 52759766 | 51 | 8 | 2 | 10 | 0 | 6 | 6 | 8 | 8 | 0.78 | 0.38 | 0.50 |
52759715 | 52759775 | 60 | 12 | 4 | 16 | 2 | 6 | 8 | 14 | 10 | 0.48 | 0.33 | 0.42 |
52759715 | 52759801 | 86 | 13 | 12 | 25 | 2 | 14 | 16 | 15 | 26 | 0.40 | 0.39 | 0.37 |
52759715 | 52759812 | 97 | 6 | 11 | 17 | 0 | 13 | 13 | 6 | 24 | 0.44 | 0.43 | 0.20 |
52759715 | 52759817 | 102 | 3 | 7 | 10 | 1 | 10 | 11 | 4 | 17 | 0.27 | 0.48 | 0.19 |
52759718 | 52759766 | 48 | 4 | 4 | 8 | 1 | 3 | 4 | 5 | 7 | 0.24 | 0.33 | 0.42 |
52759718 | 52759775 | 57 | 10 | 5 | 15 | 2 | 3 | 5 | 12 | 8 | 0.24 | 0.25 | 0.40 |
52759718 | 52759801 | 83 | 13 | 21 | 34 | 3 | 12 | 15 | 16 | 33 | 0.18 | 0.31 | 0.33 |
52759718 | 52759812 | 94 | 6 | 19 | 25 | 0 | 14 | 14 | 6 | 33 | 0.32 | 0.36 | 0.15 |
52759718 | 52759817 | 99 | 5 | 14 | 19 | 1 | 10 | 11 | 6 | 24 | 0.21 | 0.37 | 0.20 |
52759718 | 52759828 | 110 | 3 | 7 | 10 | 0 | 2 | 2 | 3 | 9 | 0.26 | 0.17 | 0.25 |
52759759 | 52759766 | 7 | 44 | 63 | 107 | 64 | 214 | 278 | 108 | 277 | 0.18 | 0.28 | 0.28 |
52759759 | 52759775 | 16 | 47 | 31 | 78 | 82 | 105 | 187 | 129 | 136 | 0.15 | 0.29 | 0.49 |
52759759 | 52759801 | 42 | 3 | 2 | 5 | 5 | 12 | 17 | 8 | 14 | 0.27 | 0.23 | 0.36 |
52759759 | 52759812 | 53 | 1 | 4 | 5 | 4 | 13 | 17 | 5 | 17 | -0.04 | 0.23 | 0.23 |
52759759 | 52759828 | 69 | 3 | 2 | 5 | 5 | 12 | 17 | 8 | 14 | 0.27 | 0.23 | 0.36 |
52759766 | 52759775 | 9 | 72 | 31 | 103 | 87 | 135 | 222 | 159 | 166 | 0.29 | 0.32 | 0.49 |
52759766 | 52759801 | 35 | 10 | 13 | 23 | 4 | 24 | 28 | 14 | 37 | 0.33 | 0.45 | 0.27 |
52759766 | 52759812 | 46 | 2 | 3 | 5 | 1 | 8 | 9 | 3 | 11 | 0.34 | 0.36 | 0.21 |
52759766 | 52759828 | 62 | 3 | 2 | 5 | 1 | 11 | 12 | 4 | 13 | 0.56 | 0.29 | 0.24 |
52759775 | 52759801 | 26 | 15 | 21 | 36 | 10 | 43 | 53 | 25 | 64 | 0.25 | 0.40 | 0.28 |
52759775 | 52759812 | 37 | 2 | 3 | 5 | 1 | 12 | 13 | 3 | 15 | 0.39 | 0.28 | 0.17 |
52759801 | 52759812 | 11 | 39 | 57 | 96 | 16 | 175 | 191 | 55 | 232 | 0.39 | 0.33 | 0.19 |
52759801 | 52759817 | 16 | 26 | 62 | 88 | 19 | 149 | 168 | 45 | 211 | 0.23 | 0.34 | 0.18 |
52759801 | 52759828 | 27 | 41 | 24 | 65 | 40 | 69 | 109 | 81 | 93 | 0.26 | 0.37 | 0.47 |
52759812 | 52759817 | 5 | 25 | 25 | 50 | 24 | 194 | 218 | 49 | 219 | 0.39 | 0.19 | 0.18 |
52759812 | 52759828 | 16 | 26 | 10 | 36 | 57 | 93 | 150 | 83 | 103 | 0.27 | 0.19 | 0.45 |
52759817 | 52759828 | 11 | 23 | 16 | 39 | 68 | 95 | 163 | 91 | 111 | 0.14 | 0.19 | 0.45 |