r2 Matrix (?)
CpG Pair 1 | CpG Pair 2 | Distance | TT Count | TC Count | T* Count | CT Count | CC Count | C* Count | *T Count | *C Count | R Value | mafA | mafB |
1732409 | 1732414 | 5 | 181 | 5 | 186 | 5 | 22 | 27 | 186 | 27 | 0.79 | 0.13 | 0.13 |
1732409 | 1732422 | 13 | 137 | 7 | 144 | 5 | 18 | 23 | 142 | 25 | 0.71 | 0.14 | 0.15 |
1732409 | 1732478 | 69 | 30 | 0 | 30 | 3 | 4 | 7 | 33 | 4 | 0.72 | 0.19 | 0.11 |
1732409 | 1732483 | 74 | 27 | 2 | 29 | 3 | 4 | 7 | 30 | 6 | 0.53 | 0.19 | 0.17 |
1732411 | 1732478 | 67 | 34 | 0 | 34 | 0 | 5 | 5 | 34 | 5 | 1.00 | 0.13 | 0.13 |
1732411 | 1732483 | 72 | 32 | 2 | 34 | 0 | 5 | 5 | 32 | 7 | 0.82 | 0.13 | 0.18 |
1732414 | 1732422 | 8 | 179 | 8 | 187 | 4 | 23 | 27 | 183 | 31 | 0.76 | 0.13 | 0.14 |
1732414 | 1732428 | 14 | 150 | 9 | 159 | 10 | 11 | 21 | 160 | 20 | 0.48 | 0.12 | 0.11 |
1732414 | 1732478 | 64 | 29 | 0 | 29 | 3 | 5 | 8 | 32 | 5 | 0.75 | 0.22 | 0.14 |
1732414 | 1732483 | 69 | 29 | 2 | 31 | 4 | 5 | 9 | 33 | 7 | 0.54 | 0.23 | 0.17 |
1732422 | 1732428 | 6 | 199 | 11 | 210 | 13 | 21 | 34 | 212 | 32 | 0.58 | 0.14 | 0.13 |
1732422 | 1732478 | 56 | 21 | 0 | 21 | 3 | 3 | 6 | 24 | 3 | 0.66 | 0.22 | 0.11 |
1732422 | 1732483 | 61 | 26 | 1 | 27 | 5 | 3 | 8 | 31 | 4 | 0.45 | 0.23 | 0.11 |
1732422 | 1732519 | 97 | 12 | 2 | 14 | 3 | 0 | 3 | 15 | 2 | -0.17 | 0.18 | 0.12 |
1732428 | 1732483 | 55 | 21 | 3 | 24 | 3 | 0 | 3 | 24 | 3 | -0.12 | 0.11 | 0.11 |
1732428 | 1732519 | 91 | 17 | 2 | 19 | 6 | 1 | 7 | 23 | 3 | 0.05 | 0.27 | 0.12 |
1732428 | 1732529 | 101 | 5 | 1 | 6 | 5 | 1 | 6 | 10 | 2 | 0.00 | 0.50 | 0.17 |
1732446 | 1732483 | 37 | 13 | 2 | 15 | 2 | 0 | 2 | 15 | 2 | -0.13 | 0.12 | 0.12 |
1732519 | 1732529 | 10 | 149 | 29 | 178 | 27 | 1 | 28 | 176 | 30 | -0.12 | 0.14 | 0.15 |
1732519 | 1732531 | 12 | 151 | 5 | 156 | 10 | 16 | 26 | 161 | 21 | 0.64 | 0.14 | 0.12 |
1732529 | 1732531 | 2 | 199 | 16 | 215 | 24 | 9 | 33 | 223 | 25 | 0.22 | 0.13 | 0.10 |