r2 Matrix (?)
CpG Pair 1 | CpG Pair 2 | Distance | TT Count | TC Count | T* Count | CT Count | CC Count | C* Count | *T Count | *C Count | R Value | mafA | mafB |
54639699 | 54639701 | 2 | 27 | 1 | 28 | 4 | 6 | 10 | 31 | 7 | 0.64 | 0.26 | 0.18 |
54639699 | 54639721 | 22 | 23 | 4 | 27 | 4 | 6 | 10 | 27 | 10 | 0.45 | 0.27 | 0.27 |
54639699 | 54639724 | 25 | 24 | 3 | 27 | 8 | 2 | 10 | 32 | 5 | 0.12 | 0.27 | 0.14 |
54639701 | 54639721 | 20 | 23 | 6 | 29 | 2 | 5 | 7 | 25 | 11 | 0.44 | 0.19 | 0.31 |
54639701 | 54639724 | 23 | 26 | 3 | 29 | 5 | 2 | 7 | 31 | 5 | 0.21 | 0.19 | 0.14 |
54639721 | 54639724 | 3 | 49 | 1 | 50 | 16 | 9 | 25 | 65 | 10 | 0.47 | 0.33 | 0.13 |
54639721 | 54639745 | 24 | 18 | 1 | 19 | 9 | 4 | 13 | 27 | 5 | 0.34 | 0.41 | 0.16 |
54639721 | 54639747 | 26 | 18 | 0 | 18 | 2 | 10 | 12 | 20 | 10 | 0.87 | 0.40 | 0.33 |
54639724 | 54639745 | 21 | 30 | 4 | 34 | 3 | 1 | 4 | 33 | 5 | 0.12 | 0.11 | 0.13 |
54639745 | 54639747 | 2 | 48 | 12 | 60 | 1 | 8 | 9 | 49 | 20 | 0.51 | 0.13 | 0.29 |
54639745 | 54639772 | 27 | 18 | 5 | 23 | 2 | 1 | 3 | 20 | 6 | 0.09 | 0.12 | 0.23 |
54639747 | 54639772 | 25 | 18 | 2 | 20 | 4 | 4 | 8 | 22 | 6 | 0.44 | 0.29 | 0.21 |
54639747 | 54639775 | 28 | 19 | 1 | 20 | 2 | 4 | 6 | 21 | 5 | 0.66 | 0.23 | 0.19 |
54639772 | 54639775 | 3 | 47 | 4 | 51 | 6 | 15 | 21 | 53 | 19 | 0.66 | 0.29 | 0.26 |
54639772 | 54639786 | 14 | 27 | 7 | 34 | 0 | 16 | 16 | 27 | 23 | 0.74 | 0.32 | 0.46 |
54639775 | 54639786 | 11 | 25 | 11 | 36 | 2 | 15 | 17 | 27 | 26 | 0.54 | 0.32 | 0.49 |
54639834 | 54639838 | 4 | 51 | 5 | 56 | 9 | 12 | 21 | 60 | 17 | 0.52 | 0.27 | 0.22 |
54639834 | 54639849 | 15 | 38 | 6 | 44 | 3 | 14 | 17 | 41 | 20 | 0.66 | 0.28 | 0.33 |
54639834 | 54639864 | 30 | 15 | 5 | 20 | 0 | 6 | 6 | 15 | 11 | 0.64 | 0.23 | 0.42 |
54639834 | 54639868 | 34 | 9 | 0 | 9 | 0 | 5 | 5 | 9 | 5 | 1.00 | 0.36 | 0.36 |
54639838 | 54639849 | 11 | 48 | 8 | 56 | 1 | 15 | 16 | 49 | 23 | 0.71 | 0.22 | 0.32 |
54639838 | 54639864 | 26 | 20 | 11 | 31 | 0 | 6 | 6 | 20 | 17 | 0.48 | 0.16 | 0.46 |
54639838 | 54639868 | 30 | 15 | 4 | 19 | 0 | 6 | 6 | 15 | 10 | 0.69 | 0.24 | 0.40 |
54639838 | 54639871 | 33 | 14 | 2 | 16 | 1 | 3 | 4 | 15 | 5 | 0.58 | 0.20 | 0.25 |
54639838 | 54639874 | 36 | 6 | 2 | 8 | 0 | 3 | 3 | 6 | 5 | 0.67 | 0.27 | 0.45 |
54639849 | 54639864 | 15 | 32 | 9 | 41 | 1 | 16 | 17 | 33 | 25 | 0.66 | 0.29 | 0.43 |
54639849 | 54639868 | 19 | 28 | 5 | 33 | 0 | 13 | 13 | 28 | 18 | 0.78 | 0.28 | 0.39 |
54639849 | 54639871 | 22 | 28 | 2 | 30 | 2 | 9 | 11 | 30 | 11 | 0.75 | 0.27 | 0.27 |
54639849 | 54639874 | 25 | 18 | 4 | 22 | 1 | 9 | 10 | 19 | 13 | 0.68 | 0.31 | 0.41 |
54639864 | 54639868 | 4 | 45 | 1 | 46 | 3 | 34 | 37 | 48 | 35 | 0.90 | 0.45 | 0.42 |
54639864 | 54639871 | 7 | 44 | 0 | 44 | 7 | 27 | 34 | 51 | 27 | 0.83 | 0.44 | 0.35 |
54639864 | 54639874 | 10 | 38 | 0 | 38 | 2 | 28 | 30 | 40 | 28 | 0.94 | 0.44 | 0.41 |
54639864 | 54639897 | 33 | 9 | 0 | 9 | 3 | 4 | 7 | 12 | 4 | 0.66 | 0.44 | 0.25 |
54639868 | 54639871 | 3 | 52 | 0 | 52 | 6 | 30 | 36 | 58 | 30 | 0.86 | 0.41 | 0.34 |
54639868 | 54639874 | 6 | 44 | 2 | 46 | 2 | 30 | 32 | 46 | 32 | 0.89 | 0.41 | 0.41 |
54639868 | 54639897 | 29 | 15 | 1 | 16 | 3 | 6 | 9 | 18 | 7 | 0.65 | 0.36 | 0.28 |
54639868 | 54639900 | 32 | 12 | 0 | 12 | 1 | 4 | 5 | 13 | 4 | 0.86 | 0.29 | 0.24 |
54639871 | 54639874 | 3 | 54 | 7 | 61 | 6 | 30 | 36 | 60 | 37 | 0.71 | 0.37 | 0.38 |
54639871 | 54639897 | 26 | 24 | 3 | 27 | 8 | 8 | 16 | 32 | 11 | 0.43 | 0.37 | 0.26 |
54639871 | 54639900 | 29 | 20 | 1 | 21 | 2 | 11 | 13 | 22 | 12 | 0.81 | 0.38 | 0.35 |
54639874 | 54639897 | 23 | 29 | 2 | 31 | 6 | 9 | 15 | 35 | 11 | 0.59 | 0.33 | 0.24 |
54639874 | 54639900 | 26 | 20 | 6 | 26 | 4 | 7 | 11 | 24 | 13 | 0.39 | 0.30 | 0.35 |
54639897 | 54639900 | 3 | 31 | 12 | 43 | 3 | 8 | 11 | 34 | 20 | 0.37 | 0.20 | 0.37 |
54639931 | 54639935 | 4 | 12 | 6 | 18 | 2 | 5 | 7 | 14 | 11 | 0.34 | 0.28 | 0.44 |
54639931 | 54639954 | 23 | 6 | 7 | 13 | 1 | 6 | 7 | 7 | 13 | 0.32 | 0.35 | 0.35 |
54639935 | 54639954 | 19 | 8 | 4 | 12 | 0 | 12 | 12 | 8 | 16 | 0.71 | 0.50 | 0.33 |
54639935 | 54639966 | 31 | 4 | 2 | 6 | 1 | 7 | 8 | 5 | 9 | 0.56 | 0.43 | 0.36 |
54639954 | 54639966 | 12 | 14 | 0 | 14 | 7 | 25 | 32 | 21 | 25 | 0.72 | 0.30 | 0.46 |
54639954 | 54639973 | 19 | 10 | 1 | 11 | 6 | 15 | 21 | 16 | 16 | 0.59 | 0.34 | 0.50 |
54639954 | 54639977 | 23 | 9 | 1 | 10 | 5 | 14 | 19 | 14 | 15 | 0.61 | 0.34 | 0.48 |
54639954 | 54639981 | 27 | 8 | 1 | 9 | 5 | 12 | 17 | 13 | 13 | 0.57 | 0.35 | 0.50 |
54639954 | 54639985 | 31 | 6 | 1 | 7 | 5 | 7 | 12 | 11 | 8 | 0.43 | 0.37 | 0.42 |
54639966 | 54639973 | 7 | 25 | 2 | 27 | 4 | 25 | 29 | 29 | 27 | 0.79 | 0.48 | 0.48 |
54639966 | 54639977 | 11 | 22 | 3 | 25 | 1 | 26 | 27 | 23 | 29 | 0.85 | 0.48 | 0.44 |
54639966 | 54639981 | 15 | 23 | 2 | 25 | 3 | 21 | 24 | 26 | 23 | 0.80 | 0.49 | 0.47 |
54639966 | 54639985 | 19 | 20 | 2 | 22 | 1 | 20 | 21 | 21 | 22 | 0.86 | 0.49 | 0.49 |
54639966 | 54640049 | 83 | 6 | 1 | 7 | 1 | 3 | 4 | 7 | 4 | 0.61 | 0.36 | 0.36 |
54639973 | 54639977 | 4 | 29 | 5 | 34 | 0 | 29 | 29 | 29 | 34 | 0.85 | 0.46 | 0.46 |
54639973 | 54639981 | 8 | 29 | 3 | 32 | 3 | 25 | 28 | 32 | 28 | 0.80 | 0.47 | 0.47 |
54639973 | 54639985 | 12 | 25 | 4 | 29 | 2 | 23 | 25 | 27 | 27 | 0.78 | 0.46 | 0.50 |
54639973 | 54640049 | 76 | 8 | 1 | 9 | 0 | 4 | 4 | 8 | 5 | 0.84 | 0.31 | 0.38 |
54639973 | 54640052 | 79 | 6 | 2 | 8 | 0 | 4 | 4 | 6 | 6 | 0.71 | 0.33 | 0.50 |
54639973 | 54640057 | 84 | 6 | 2 | 8 | 1 | 3 | 4 | 7 | 5 | 0.48 | 0.33 | 0.42 |
54639977 | 54639981 | 4 | 27 | 4 | 31 | 8 | 24 | 32 | 35 | 28 | 0.62 | 0.49 | 0.44 |
54639977 | 54639985 | 8 | 28 | 0 | 28 | 3 | 27 | 30 | 31 | 27 | 0.90 | 0.48 | 0.47 |
54639977 | 54640006 | 29 | 7 | 0 | 7 | 2 | 3 | 5 | 9 | 3 | 0.68 | 0.42 | 0.25 |
54639977 | 54640049 | 72 | 7 | 0 | 7 | 1 | 5 | 6 | 8 | 5 | 0.85 | 0.46 | 0.38 |
54639977 | 54640052 | 75 | 6 | 0 | 6 | 0 | 6 | 6 | 6 | 6 | 1.00 | 0.50 | 0.50 |
54639977 | 54640057 | 80 | 6 | 0 | 6 | 1 | 5 | 6 | 7 | 5 | 0.84 | 0.50 | 0.42 |
54639981 | 54639985 | 4 | 31 | 6 | 37 | 4 | 22 | 26 | 35 | 28 | 0.68 | 0.41 | 0.44 |
54639981 | 54640006 | 25 | 9 | 2 | 11 | 4 | 2 | 6 | 13 | 4 | 0.17 | 0.35 | 0.24 |
54639981 | 54640049 | 68 | 7 | 1 | 8 | 1 | 4 | 5 | 8 | 5 | 0.68 | 0.38 | 0.38 |
54639981 | 54640052 | 71 | 5 | 2 | 7 | 1 | 4 | 5 | 6 | 6 | 0.51 | 0.42 | 0.50 |
54639981 | 54640057 | 76 | 5 | 2 | 7 | 2 | 3 | 5 | 7 | 5 | 0.31 | 0.42 | 0.42 |
54639985 | 54640006 | 21 | 13 | 0 | 13 | 3 | 4 | 7 | 16 | 4 | 0.68 | 0.35 | 0.20 |
54639985 | 54640049 | 64 | 6 | 0 | 6 | 1 | 5 | 6 | 7 | 5 | 0.84 | 0.50 | 0.42 |
54639985 | 54640052 | 67 | 5 | 0 | 5 | 0 | 6 | 6 | 5 | 6 | 1.00 | 0.45 | 0.45 |
54639985 | 54640057 | 72 | 5 | 0 | 5 | 1 | 5 | 6 | 6 | 5 | 0.83 | 0.45 | 0.45 |
54640006 | 54640017 | 11 | 6 | 6 | 12 | 4 | 14 | 18 | 10 | 20 | 0.29 | 0.40 | 0.33 |
54640006 | 54640021 | 15 | 6 | 6 | 12 | 4 | 14 | 18 | 10 | 20 | 0.29 | 0.40 | 0.33 |
54640006 | 54640023 | 17 | 6 | 4 | 10 | 1 | 16 | 17 | 7 | 20 | 0.60 | 0.37 | 0.26 |
54640006 | 54640030 | 24 | 6 | 3 | 9 | 4 | 11 | 15 | 10 | 14 | 0.39 | 0.38 | 0.42 |
54640006 | 54640034 | 28 | 2 | 3 | 5 | 3 | 8 | 11 | 5 | 11 | 0.13 | 0.31 | 0.31 |
54640017 | 54640021 | 4 | 14 | 3 | 17 | 5 | 22 | 27 | 19 | 25 | 0.63 | 0.39 | 0.43 |
54640017 | 54640023 | 6 | 10 | 6 | 16 | 4 | 21 | 25 | 14 | 27 | 0.48 | 0.39 | 0.34 |
54640017 | 54640030 | 13 | 13 | 2 | 15 | 5 | 17 | 22 | 18 | 19 | 0.63 | 0.41 | 0.49 |
54640017 | 54640034 | 17 | 8 | 4 | 12 | 8 | 10 | 18 | 16 | 14 | 0.22 | 0.40 | 0.47 |
54640017 | 54640049 | 32 | 3 | 1 | 4 | 2 | 5 | 7 | 5 | 6 | 0.45 | 0.36 | 0.45 |
54640021 | 54640023 | 2 | 12 | 6 | 18 | 2 | 26 | 28 | 14 | 32 | 0.63 | 0.39 | 0.30 |
54640021 | 54640030 | 9 | 14 | 3 | 17 | 4 | 21 | 25 | 18 | 24 | 0.66 | 0.40 | 0.43 |
54640021 | 54640034 | 13 | 10 | 4 | 14 | 6 | 15 | 21 | 16 | 19 | 0.42 | 0.40 | 0.46 |
54640021 | 54640049 | 28 | 4 | 1 | 5 | 1 | 9 | 10 | 5 | 10 | 0.70 | 0.33 | 0.33 |
54640021 | 54640052 | 31 | 3 | 0 | 3 | 1 | 7 | 8 | 4 | 7 | 0.81 | 0.27 | 0.36 |
54640023 | 54640030 | 7 | 11 | 2 | 13 | 7 | 22 | 29 | 18 | 24 | 0.56 | 0.31 | 0.43 |
54640023 | 54640034 | 11 | 7 | 3 | 10 | 9 | 16 | 25 | 16 | 19 | 0.31 | 0.29 | 0.46 |
54640023 | 54640049 | 26 | 4 | 1 | 5 | 1 | 9 | 10 | 5 | 10 | 0.70 | 0.33 | 0.33 |
54640023 | 54640052 | 29 | 2 | 0 | 2 | 2 | 7 | 9 | 4 | 7 | 0.62 | 0.18 | 0.36 |
54640030 | 54640034 | 4 | 9 | 6 | 15 | 9 | 14 | 23 | 18 | 20 | 0.20 | 0.39 | 0.47 |
54640030 | 54640049 | 19 | 5 | 2 | 7 | 1 | 8 | 9 | 6 | 10 | 0.62 | 0.44 | 0.38 |
54640030 | 54640052 | 22 | 5 | 0 | 5 | 1 | 7 | 8 | 6 | 7 | 0.85 | 0.38 | 0.46 |
54640030 | 54640105 | 75 | 2 | 2 | 4 | 1 | 6 | 7 | 3 | 8 | 0.39 | 0.36 | 0.27 |
54640034 | 54640049 | 15 | 8 | 4 | 12 | 0 | 8 | 8 | 8 | 12 | 0.67 | 0.40 | 0.40 |
54640034 | 54640052 | 18 | 6 | 3 | 9 | 2 | 5 | 7 | 8 | 8 | 0.38 | 0.44 | 0.50 |
54640049 | 54640052 | 3 | 18 | 4 | 22 | 4 | 16 | 20 | 22 | 20 | 0.62 | 0.48 | 0.48 |
54640049 | 54640057 | 8 | 16 | 3 | 19 | 3 | 13 | 16 | 19 | 16 | 0.66 | 0.46 | 0.46 |
54640049 | 54640075 | 26 | 8 | 4 | 12 | 0 | 9 | 9 | 8 | 13 | 0.68 | 0.43 | 0.38 |
54640052 | 54640057 | 5 | 18 | 2 | 20 | 2 | 14 | 16 | 20 | 16 | 0.78 | 0.44 | 0.44 |
54640052 | 54640075 | 23 | 9 | 2 | 11 | 0 | 11 | 11 | 9 | 13 | 0.83 | 0.50 | 0.41 |
54640057 | 54640075 | 18 | 9 | 3 | 12 | 0 | 12 | 12 | 9 | 15 | 0.78 | 0.50 | 0.38 |
54640075 | 54640081 | 6 | 4 | 3 | 7 | 4 | 14 | 18 | 8 | 17 | 0.34 | 0.28 | 0.32 |
54640075 | 54640093 | 18 | 2 | 3 | 5 | 3 | 10 | 13 | 5 | 13 | 0.17 | 0.28 | 0.28 |
54640075 | 54640095 | 20 | 0 | 3 | 3 | 7 | 5 | 12 | 7 | 8 | -0.47 | 0.20 | 0.47 |
54640081 | 54640093 | 12 | 8 | 1 | 9 | 4 | 16 | 20 | 12 | 17 | 0.65 | 0.31 | 0.41 |
54640081 | 54640095 | 14 | 6 | 0 | 6 | 12 | 8 | 20 | 18 | 8 | 0.36 | 0.23 | 0.31 |
54640081 | 54640105 | 24 | 4 | 1 | 5 | 0 | 17 | 17 | 4 | 18 | 0.87 | 0.23 | 0.18 |
54640093 | 54640095 | 2 | 16 | 1 | 17 | 12 | 12 | 24 | 28 | 13 | 0.47 | 0.41 | 0.32 |
54640093 | 54640105 | 12 | 10 | 5 | 15 | 0 | 22 | 22 | 10 | 27 | 0.74 | 0.41 | 0.27 |
54640095 | 54640105 | 10 | 11 | 16 | 27 | 0 | 11 | 11 | 11 | 27 | 0.41 | 0.29 | 0.29 |
54640105 | 54640123 | 18 | 7 | 3 | 10 | 0 | 13 | 13 | 7 | 16 | 0.75 | 0.43 | 0.30 |