r2 Matrix (?)
CpG Pair 1 | CpG Pair 2 | Distance | TT Count | TC Count | T* Count | CT Count | CC Count | C* Count | *T Count | *C Count | R Value | mafA | mafB |
123439500 | 123439504 | 4 | 14 | 3 | 17 | 3 | 18 | 21 | 17 | 21 | 0.68 | 0.45 | 0.45 |
123439500 | 123439519 | 19 | 4 | 2 | 6 | 1 | 6 | 7 | 5 | 8 | 0.54 | 0.46 | 0.38 |
123439500 | 123439522 | 22 | 5 | 0 | 5 | 2 | 5 | 7 | 7 | 5 | 0.71 | 0.42 | 0.42 |
123439504 | 123439519 | 15 | 5 | 3 | 8 | 3 | 5 | 8 | 8 | 8 | 0.25 | 0.50 | 0.50 |
123439504 | 123439522 | 18 | 6 | 2 | 8 | 1 | 6 | 7 | 7 | 8 | 0.61 | 0.47 | 0.47 |
123439504 | 123439533 | 29 | 6 | 0 | 6 | 2 | 3 | 5 | 8 | 3 | 0.67 | 0.45 | 0.27 |
123439519 | 123439522 | 3 | 12 | 7 | 19 | 11 | 9 | 20 | 23 | 16 | 0.08 | 0.49 | 0.41 |
123439519 | 123439533 | 14 | 17 | 2 | 19 | 10 | 7 | 17 | 27 | 9 | 0.35 | 0.47 | 0.25 |
123439519 | 123439542 | 23 | 9 | 1 | 10 | 7 | 5 | 12 | 16 | 6 | 0.35 | 0.45 | 0.27 |
123439519 | 123439544 | 25 | 6 | 1 | 7 | 6 | 3 | 9 | 12 | 4 | 0.22 | 0.44 | 0.25 |
123439519 | 123439546 | 27 | 4 | 1 | 5 | 5 | 2 | 7 | 9 | 3 | 0.10 | 0.42 | 0.25 |
123439522 | 123439533 | 11 | 26 | 1 | 27 | 9 | 9 | 18 | 35 | 10 | 0.55 | 0.40 | 0.22 |
123439522 | 123439542 | 20 | 18 | 2 | 20 | 5 | 6 | 11 | 23 | 8 | 0.49 | 0.35 | 0.26 |
123439522 | 123439544 | 22 | 15 | 2 | 17 | 4 | 4 | 8 | 19 | 6 | 0.42 | 0.32 | 0.24 |
123439522 | 123439546 | 24 | 15 | 0 | 15 | 3 | 4 | 7 | 18 | 4 | 0.69 | 0.32 | 0.18 |
123439533 | 123439542 | 9 | 45 | 7 | 52 | 2 | 13 | 15 | 47 | 20 | 0.67 | 0.22 | 0.30 |
123439533 | 123439544 | 11 | 43 | 6 | 49 | 2 | 10 | 12 | 45 | 16 | 0.64 | 0.20 | 0.26 |
123439533 | 123439546 | 13 | 41 | 5 | 46 | 2 | 9 | 11 | 43 | 14 | 0.65 | 0.19 | 0.25 |
123439533 | 123439561 | 28 | 14 | 3 | 17 | 2 | 4 | 6 | 16 | 7 | 0.47 | 0.26 | 0.30 |
123439542 | 123439544 | 2 | 59 | 6 | 65 | 8 | 16 | 24 | 67 | 22 | 0.59 | 0.27 | 0.25 |
123439542 | 123439546 | 4 | 58 | 4 | 62 | 6 | 17 | 23 | 64 | 21 | 0.69 | 0.27 | 0.25 |
123439542 | 123439561 | 19 | 29 | 7 | 36 | 4 | 11 | 15 | 33 | 18 | 0.51 | 0.29 | 0.35 |
123439542 | 123439626 | 84 | 6 | 3 | 9 | 1 | 3 | 4 | 7 | 6 | 0.39 | 0.31 | 0.46 |
123439542 | 123439631 | 89 | 3 | 4 | 7 | 1 | 3 | 4 | 4 | 7 | 0.18 | 0.36 | 0.36 |
123439544 | 123439546 | 2 | 60 | 7 | 67 | 5 | 17 | 22 | 65 | 24 | 0.65 | 0.25 | 0.27 |
123439544 | 123439561 | 17 | 32 | 7 | 39 | 3 | 13 | 16 | 35 | 20 | 0.60 | 0.29 | 0.36 |
123439544 | 123439577 | 33 | 4 | 3 | 7 | 0 | 4 | 4 | 4 | 7 | 0.57 | 0.36 | 0.36 |
123439544 | 123439626 | 82 | 7 | 3 | 10 | 0 | 3 | 3 | 7 | 6 | 0.59 | 0.23 | 0.46 |
123439544 | 123439631 | 87 | 4 | 4 | 8 | 0 | 3 | 3 | 4 | 7 | 0.46 | 0.27 | 0.36 |
123439546 | 123439561 | 15 | 35 | 5 | 40 | 3 | 15 | 18 | 38 | 20 | 0.69 | 0.31 | 0.34 |
123439546 | 123439577 | 31 | 6 | 3 | 9 | 1 | 4 | 5 | 7 | 7 | 0.45 | 0.36 | 0.50 |
123439546 | 123439626 | 80 | 7 | 3 | 10 | 0 | 2 | 2 | 7 | 5 | 0.53 | 0.17 | 0.42 |
123439561 | 123439577 | 16 | 39 | 8 | 47 | 8 | 14 | 22 | 47 | 22 | 0.47 | 0.32 | 0.32 |
123439561 | 123439626 | 65 | 5 | 3 | 8 | 1 | 2 | 3 | 6 | 5 | 0.26 | 0.27 | 0.45 |
123439577 | 123439596 | 19 | 24 | 1 | 25 | 5 | 10 | 15 | 29 | 11 | 0.68 | 0.38 | 0.28 |
123439596 | 123439626 | 30 | 12 | 5 | 17 | 0 | 2 | 2 | 12 | 7 | 0.45 | 0.11 | 0.37 |
123439626 | 123439631 | 5 | 36 | 13 | 49 | 3 | 26 | 29 | 39 | 39 | 0.61 | 0.37 | 0.50 |
123439626 | 123439636 | 10 | 41 | 2 | 43 | 9 | 16 | 25 | 50 | 18 | 0.65 | 0.37 | 0.26 |
123439626 | 123439641 | 15 | 20 | 18 | 38 | 4 | 17 | 21 | 24 | 35 | 0.33 | 0.36 | 0.41 |
123439631 | 123439636 | 5 | 46 | 1 | 47 | 19 | 23 | 42 | 65 | 24 | 0.59 | 0.47 | 0.27 |
123439631 | 123439641 | 10 | 24 | 17 | 41 | 10 | 29 | 39 | 34 | 46 | 0.33 | 0.49 | 0.42 |
123439636 | 123439641 | 5 | 35 | 35 | 70 | 4 | 20 | 24 | 39 | 55 | 0.29 | 0.26 | 0.41 |
123439641 | 123439671 | 30 | 5 | 3 | 8 | 3 | 1 | 4 | 8 | 4 | -0.12 | 0.33 | 0.33 |
123439671 | 123439675 | 4 | 4 | 0 | 4 | 7 | 19 | 26 | 11 | 19 | 0.52 | 0.13 | 0.37 |
123439671 | 123439682 | 11 | 4 | 0 | 4 | 3 | 18 | 21 | 7 | 18 | 0.70 | 0.16 | 0.28 |
123439671 | 123439692 | 21 | 1 | 1 | 2 | 5 | 11 | 16 | 6 | 12 | 0.12 | 0.11 | 0.33 |
123439675 | 123439682 | 7 | 9 | 0 | 9 | 0 | 22 | 22 | 9 | 22 | 1.00 | 0.29 | 0.29 |
123439675 | 123439692 | 17 | 5 | 2 | 7 | 5 | 12 | 17 | 10 | 14 | 0.39 | 0.29 | 0.42 |
123439682 | 123439692 | 10 | 6 | 3 | 9 | 5 | 13 | 18 | 11 | 16 | 0.37 | 0.33 | 0.41 |
123439713 | 123439718 | 5 | 8 | 2 | 10 | 1 | 11 | 12 | 9 | 13 | 0.73 | 0.45 | 0.41 |
123439755 | 123439764 | 9 | 6 | 1 | 7 | 3 | 11 | 14 | 9 | 12 | 0.61 | 0.33 | 0.43 |
123439755 | 123439770 | 15 | 5 | 1 | 6 | 1 | 9 | 10 | 6 | 10 | 0.73 | 0.38 | 0.38 |
123439764 | 123439770 | 6 | 5 | 4 | 9 | 3 | 12 | 15 | 8 | 16 | 0.36 | 0.38 | 0.33 |
123439806 | 123439811 | 5 | 13 | 6 | 19 | 3 | 15 | 18 | 16 | 21 | 0.52 | 0.49 | 0.43 |
123439806 | 123439813 | 7 | 15 | 2 | 17 | 5 | 13 | 18 | 20 | 15 | 0.61 | 0.49 | 0.43 |
123439811 | 123439813 | 2 | 12 | 3 | 15 | 8 | 13 | 21 | 20 | 16 | 0.42 | 0.42 | 0.44 |
123439839 | 123439847 | 8 | 11 | 2 | 13 | 4 | 26 | 30 | 15 | 28 | 0.69 | 0.30 | 0.35 |
123439839 | 123439849 | 10 | 8 | 4 | 12 | 10 | 18 | 28 | 18 | 22 | 0.28 | 0.30 | 0.45 |
123439839 | 123439852 | 13 | 6 | 3 | 9 | 6 | 19 | 25 | 12 | 22 | 0.39 | 0.26 | 0.35 |
123439839 | 123439856 | 17 | 5 | 1 | 6 | 6 | 15 | 21 | 11 | 16 | 0.46 | 0.22 | 0.41 |
123439839 | 123439864 | 25 | 2 | 3 | 5 | 2 | 8 | 10 | 4 | 11 | 0.21 | 0.33 | 0.27 |
123439847 | 123439849 | 2 | 14 | 3 | 17 | 7 | 24 | 31 | 21 | 27 | 0.58 | 0.35 | 0.44 |
123439847 | 123439852 | 5 | 11 | 2 | 13 | 4 | 25 | 29 | 15 | 27 | 0.68 | 0.31 | 0.36 |
123439847 | 123439856 | 9 | 8 | 2 | 10 | 6 | 19 | 25 | 14 | 21 | 0.52 | 0.29 | 0.40 |
123439847 | 123439864 | 17 | 6 | 1 | 7 | 2 | 14 | 16 | 8 | 15 | 0.71 | 0.30 | 0.35 |
123439847 | 123439868 | 21 | 3 | 0 | 3 | 2 | 11 | 13 | 5 | 11 | 0.71 | 0.19 | 0.31 |
123439849 | 123439852 | 3 | 15 | 2 | 17 | 0 | 25 | 25 | 15 | 27 | 0.90 | 0.40 | 0.36 |
123439849 | 123439856 | 7 | 10 | 4 | 14 | 4 | 17 | 21 | 14 | 21 | 0.52 | 0.40 | 0.40 |
123439849 | 123439864 | 15 | 6 | 2 | 8 | 2 | 13 | 15 | 8 | 15 | 0.62 | 0.35 | 0.35 |
123439849 | 123439868 | 19 | 4 | 1 | 5 | 1 | 10 | 11 | 5 | 11 | 0.71 | 0.31 | 0.31 |
123439852 | 123439856 | 4 | 10 | 2 | 12 | 4 | 20 | 24 | 14 | 22 | 0.65 | 0.33 | 0.39 |
123439852 | 123439864 | 12 | 5 | 2 | 7 | 3 | 14 | 17 | 8 | 16 | 0.52 | 0.29 | 0.33 |
123439852 | 123439868 | 16 | 4 | 0 | 4 | 1 | 12 | 13 | 5 | 12 | 0.86 | 0.24 | 0.29 |
123439856 | 123439864 | 8 | 8 | 5 | 13 | 3 | 13 | 16 | 11 | 18 | 0.44 | 0.45 | 0.38 |
123439856 | 123439868 | 12 | 5 | 3 | 8 | 3 | 11 | 14 | 8 | 14 | 0.41 | 0.36 | 0.36 |
123439856 | 123439876 | 20 | 3 | 3 | 6 | 2 | 4 | 6 | 5 | 7 | 0.17 | 0.50 | 0.42 |
123439864 | 123439868 | 4 | 8 | 3 | 11 | 2 | 14 | 16 | 10 | 17 | 0.61 | 0.41 | 0.37 |
123439864 | 123439876 | 12 | 6 | 3 | 9 | 1 | 7 | 8 | 7 | 10 | 0.55 | 0.47 | 0.41 |
123439868 | 123439876 | 8 | 7 | 3 | 10 | 2 | 9 | 11 | 9 | 12 | 0.52 | 0.48 | 0.43 |