r2 Matrix (?)
CpG Pair 1 | CpG Pair 2 | Distance | TT Count | TC Count | T* Count | CT Count | CC Count | C* Count | *T Count | *C Count | R Value | mafA | mafB |
3000157 | 3000169 | 12 | 63 | 70 | 133 | 111 | 863 | 974 | 174 | 933 | 0.32 | 0.12 | 0.16 |
3000157 | 3000172 | 15 | 63 | 60 | 123 | 215 | 654 | 869 | 278 | 714 | 0.19 | 0.12 | 0.28 |
3000157 | 3000253 | 96 | 3 | 3 | 6 | 5 | 48 | 53 | 8 | 51 | 0.36 | 0.10 | 0.14 |
3000157 | 3000262 | 105 | 1 | 4 | 5 | 5 | 29 | 34 | 6 | 33 | 0.05 | 0.13 | 0.15 |
3000157 | 3000274 | 117 | 2 | 1 | 3 | 1 | 10 | 11 | 3 | 11 | 0.58 | 0.21 | 0.21 |
3000169 | 3000172 | 3 | 129 | 121 | 250 | 309 | 995 | 1304 | 438 | 1116 | 0.23 | 0.16 | 0.28 |
3000169 | 3000221 | 52 | 6 | 3 | 9 | 8 | 31 | 39 | 14 | 34 | 0.40 | 0.19 | 0.29 |
3000169 | 3000224 | 55 | 3 | 6 | 9 | 6 | 34 | 40 | 9 | 40 | 0.18 | 0.18 | 0.18 |
3000169 | 3000253 | 84 | 1 | 12 | 13 | 11 | 54 | 65 | 12 | 66 | -0.10 | 0.17 | 0.15 |
3000169 | 3000262 | 93 | 1 | 9 | 10 | 7 | 44 | 51 | 8 | 53 | -0.04 | 0.16 | 0.13 |
3000169 | 3000274 | 105 | 3 | 2 | 5 | 3 | 18 | 21 | 6 | 20 | 0.43 | 0.19 | 0.23 |
3000172 | 3000221 | 49 | 9 | 3 | 12 | 4 | 21 | 25 | 13 | 24 | 0.58 | 0.32 | 0.35 |
3000172 | 3000224 | 52 | 5 | 9 | 14 | 2 | 22 | 24 | 7 | 31 | 0.34 | 0.37 | 0.18 |
3000172 | 3000253 | 81 | 2 | 19 | 21 | 10 | 43 | 53 | 12 | 62 | -0.11 | 0.28 | 0.16 |
3000172 | 3000262 | 90 | 1 | 16 | 17 | 7 | 37 | 44 | 8 | 53 | -0.13 | 0.28 | 0.13 |
3000172 | 3000274 | 102 | 1 | 8 | 9 | 6 | 13 | 19 | 7 | 21 | -0.22 | 0.32 | 0.25 |
3000221 | 3000224 | 3 | 199 | 239 | 438 | 196 | 1214 | 1410 | 395 | 1453 | 0.33 | 0.24 | 0.21 |
3000221 | 3000274 | 53 | 3 | 3 | 6 | 3 | 22 | 25 | 6 | 25 | 0.38 | 0.19 | 0.19 |
3000221 | 3000290 | 69 | 23 | 42 | 65 | 47 | 232 | 279 | 70 | 274 | 0.18 | 0.19 | 0.20 |
3000221 | 3000296 | 75 | 22 | 47 | 69 | 67 | 227 | 294 | 89 | 274 | 0.08 | 0.19 | 0.25 |
3000221 | 3000307 | 86 | 20 | 47 | 67 | 24 | 259 | 283 | 44 | 306 | 0.25 | 0.19 | 0.13 |
3000221 | 3000319 | 98 | 13 | 38 | 51 | 68 | 120 | 188 | 81 | 158 | -0.09 | 0.21 | 0.34 |
3000224 | 3000274 | 50 | 1 | 2 | 3 | 4 | 19 | 23 | 5 | 21 | 0.13 | 0.12 | 0.19 |
3000224 | 3000290 | 66 | 28 | 36 | 64 | 41 | 228 | 269 | 69 | 264 | 0.28 | 0.19 | 0.21 |
3000224 | 3000296 | 72 | 27 | 41 | 68 | 60 | 224 | 284 | 87 | 265 | 0.17 | 0.19 | 0.25 |
3000224 | 3000307 | 83 | 15 | 52 | 67 | 28 | 247 | 275 | 43 | 299 | 0.15 | 0.20 | 0.13 |
3000224 | 3000319 | 95 | 20 | 28 | 48 | 63 | 125 | 188 | 83 | 153 | 0.07 | 0.20 | 0.35 |
3000253 | 3000262 | 9 | 47 | 188 | 235 | 88 | 625 | 713 | 135 | 813 | 0.10 | 0.25 | 0.14 |
3000253 | 3000274 | 21 | 49 | 125 | 174 | 84 | 276 | 360 | 133 | 401 | 0.05 | 0.33 | 0.25 |
3000253 | 3000290 | 37 | 0 | 2 | 2 | 3 | 6 | 9 | 3 | 8 | -0.29 | 0.18 | 0.27 |
3000253 | 3000296 | 43 | 1 | 1 | 2 | 1 | 9 | 10 | 2 | 10 | 0.40 | 0.17 | 0.17 |
3000253 | 3000307 | 54 | 1 | 2 | 3 | 2 | 12 | 14 | 3 | 14 | 0.19 | 0.18 | 0.18 |
3000253 | 3000319 | 66 | 3 | 3 | 6 | 8 | 13 | 21 | 11 | 16 | 0.10 | 0.22 | 0.41 |
3000253 | 3000334 | 81 | 5 | 0 | 5 | 6 | 20 | 26 | 11 | 20 | 0.59 | 0.16 | 0.35 |
3000253 | 3000345 | 92 | 5 | 0 | 5 | 7 | 18 | 25 | 12 | 18 | 0.55 | 0.17 | 0.40 |
3000253 | 3000355 | 102 | 1 | 1 | 2 | 9 | 7 | 16 | 10 | 8 | -0.04 | 0.11 | 0.44 |
3000262 | 3000274 | 12 | 83 | 58 | 141 | 137 | 594 | 731 | 220 | 652 | 0.34 | 0.16 | 0.25 |
3000262 | 3000290 | 28 | 16 | 38 | 54 | 35 | 193 | 228 | 51 | 231 | 0.15 | 0.19 | 0.18 |
3000262 | 3000296 | 34 | 3 | 7 | 10 | 12 | 57 | 69 | 15 | 64 | 0.11 | 0.13 | 0.19 |
3000262 | 3000319 | 57 | 3 | 2 | 5 | 6 | 10 | 16 | 9 | 12 | 0.19 | 0.24 | 0.43 |
3000262 | 3000334 | 72 | 6 | 1 | 7 | 8 | 19 | 27 | 14 | 20 | 0.46 | 0.21 | 0.41 |
3000262 | 3000345 | 83 | 6 | 1 | 7 | 9 | 18 | 27 | 15 | 19 | 0.43 | 0.21 | 0.44 |
3000262 | 3000355 | 93 | 3 | 0 | 3 | 11 | 8 | 19 | 14 | 8 | 0.30 | 0.14 | 0.36 |
3000274 | 3000290 | 16 | 71 | 136 | 207 | 60 | 402 | 462 | 131 | 538 | 0.25 | 0.31 | 0.20 |
3000274 | 3000296 | 22 | 53 | 102 | 155 | 50 | 255 | 305 | 103 | 357 | 0.20 | 0.34 | 0.22 |
3000274 | 3000307 | 33 | 9 | 43 | 52 | 7 | 83 | 90 | 16 | 126 | 0.14 | 0.37 | 0.11 |
3000274 | 3000334 | 60 | 3 | 3 | 6 | 6 | 11 | 17 | 9 | 14 | 0.13 | 0.26 | 0.39 |
3000274 | 3000345 | 71 | 8 | 1 | 9 | 4 | 13 | 17 | 12 | 14 | 0.62 | 0.35 | 0.46 |
3000274 | 3000355 | 81 | 7 | 0 | 7 | 6 | 8 | 14 | 13 | 8 | 0.56 | 0.33 | 0.38 |
3000290 | 3000296 | 6 | 142 | 208 | 350 | 236 | 926 | 1162 | 378 | 1134 | 0.20 | 0.23 | 0.25 |
3000290 | 3000307 | 17 | 89 | 190 | 279 | 106 | 815 | 921 | 195 | 1005 | 0.23 | 0.23 | 0.16 |
3000290 | 3000319 | 29 | 50 | 97 | 147 | 141 | 298 | 439 | 191 | 395 | 0.02 | 0.25 | 0.33 |
3000296 | 3000307 | 11 | 114 | 219 | 333 | 98 | 863 | 961 | 212 | 1082 | 0.28 | 0.26 | 0.16 |
3000296 | 3000319 | 23 | 64 | 108 | 172 | 155 | 337 | 492 | 219 | 445 | 0.05 | 0.26 | 0.33 |
3000307 | 3000319 | 12 | 59 | 72 | 131 | 186 | 435 | 621 | 245 | 507 | 0.12 | 0.17 | 0.33 |
3000307 | 3000334 | 27 | 12 | 3 | 15 | 10 | 30 | 40 | 22 | 33 | 0.50 | 0.27 | 0.40 |
3000319 | 3000334 | 15 | 25 | 11 | 36 | 20 | 60 | 80 | 45 | 71 | 0.42 | 0.31 | 0.39 |
3000319 | 3000345 | 26 | 9 | 11 | 20 | 14 | 16 | 30 | 23 | 27 | -0.02 | 0.40 | 0.46 |
3000334 | 3000345 | 11 | 48 | 18 | 66 | 33 | 63 | 96 | 81 | 81 | 0.38 | 0.41 | 0.50 |
3000334 | 3000355 | 21 | 30 | 18 | 48 | 32 | 32 | 64 | 62 | 50 | 0.12 | 0.43 | 0.45 |
3000345 | 3000355 | 10 | 62 | 18 | 80 | 24 | 47 | 71 | 86 | 65 | 0.44 | 0.47 | 0.43 |