r2 Matrix (?)
CpG Pair 1 | CpG Pair 2 | Distance | TT Count | TC Count | T* Count | CT Count | CC Count | C* Count | *T Count | *C Count | R Value | mafA | mafB |
9435629 | 9435651 | 22 | 10 | 2 | 12 | 3 | 36 | 39 | 13 | 38 | 0.74 | 0.24 | 0.25 |
9435651 | 9435676 | 25 | 3 | 0 | 3 | 0 | 9 | 9 | 3 | 9 | 1.00 | 0.25 | 0.25 |
9435676 | 9435688 | 12 | 3 | 0 | 3 | 1 | 24 | 25 | 4 | 24 | 0.85 | 0.11 | 0.14 |
9435676 | 9435763 | 87 | 2 | 0 | 2 | 0 | 9 | 9 | 2 | 9 | 1.00 | 0.18 | 0.18 |
9435688 | 9435703 | 15 | 3 | 4 | 7 | 5 | 34 | 39 | 8 | 38 | 0.28 | 0.15 | 0.17 |
9435688 | 9435772 | 84 | 1 | 2 | 3 | 2 | 18 | 20 | 3 | 20 | 0.23 | 0.13 | 0.13 |
9435703 | 9435721 | 18 | 7 | 0 | 7 | 2 | 26 | 28 | 9 | 26 | 0.85 | 0.20 | 0.26 |
9435703 | 9435733 | 30 | 3 | 1 | 4 | 0 | 13 | 13 | 3 | 14 | 0.83 | 0.24 | 0.18 |
9435703 | 9435736 | 33 | 2 | 1 | 3 | 0 | 10 | 10 | 2 | 11 | 0.78 | 0.23 | 0.15 |
9435703 | 9435772 | 69 | 3 | 2 | 5 | 3 | 25 | 28 | 6 | 27 | 0.46 | 0.15 | 0.18 |
9435703 | 9435774 | 71 | 3 | 2 | 5 | 2 | 26 | 28 | 5 | 28 | 0.53 | 0.15 | 0.15 |
9435721 | 9435733 | 12 | 8 | 7 | 15 | 0 | 30 | 30 | 8 | 37 | 0.66 | 0.33 | 0.18 |
9435721 | 9435736 | 15 | 8 | 4 | 12 | 0 | 28 | 28 | 8 | 32 | 0.76 | 0.30 | 0.20 |
9435721 | 9435739 | 18 | 5 | 4 | 9 | 1 | 18 | 19 | 6 | 22 | 0.57 | 0.32 | 0.21 |
9435721 | 9435742 | 21 | 4 | 3 | 7 | 1 | 15 | 16 | 5 | 18 | 0.57 | 0.30 | 0.22 |
9435721 | 9435748 | 27 | 4 | 2 | 6 | 0 | 12 | 12 | 4 | 14 | 0.76 | 0.33 | 0.22 |
9435721 | 9435751 | 30 | 3 | 1 | 4 | 0 | 9 | 9 | 3 | 10 | 0.82 | 0.31 | 0.23 |
9435721 | 9435772 | 51 | 3 | 0 | 3 | 1 | 10 | 11 | 4 | 10 | 0.83 | 0.21 | 0.29 |
9435721 | 9435774 | 53 | 3 | 0 | 3 | 1 | 10 | 11 | 4 | 10 | 0.83 | 0.21 | 0.29 |
9435721 | 9435779 | 58 | 2 | 1 | 3 | 1 | 10 | 11 | 3 | 11 | 0.58 | 0.21 | 0.21 |
9435721 | 9435789 | 68 | 2 | 2 | 4 | 1 | 10 | 11 | 3 | 12 | 0.45 | 0.27 | 0.20 |
9435721 | 9435791 | 70 | 3 | 1 | 4 | 0 | 12 | 12 | 3 | 13 | 0.83 | 0.25 | 0.19 |
9435736 | 9435739 | 3 | 15 | 3 | 18 | 5 | 92 | 97 | 20 | 95 | 0.75 | 0.16 | 0.17 |
9435736 | 9435742 | 6 | 15 | 1 | 16 | 11 | 83 | 94 | 26 | 84 | 0.68 | 0.15 | 0.24 |
9435736 | 9435748 | 12 | 13 | 2 | 15 | 2 | 86 | 88 | 15 | 88 | 0.84 | 0.15 | 0.15 |
9435736 | 9435751 | 15 | 14 | 1 | 15 | 11 | 70 | 81 | 25 | 71 | 0.66 | 0.16 | 0.26 |
9435736 | 9435763 | 27 | 4 | 1 | 5 | 2 | 21 | 23 | 6 | 22 | 0.67 | 0.18 | 0.21 |
9435739 | 9435742 | 3 | 15 | 3 | 18 | 11 | 92 | 103 | 26 | 95 | 0.63 | 0.15 | 0.21 |
9435739 | 9435748 | 9 | 12 | 5 | 17 | 3 | 96 | 99 | 15 | 101 | 0.71 | 0.15 | 0.13 |
9435739 | 9435751 | 12 | 16 | 1 | 17 | 10 | 82 | 92 | 26 | 83 | 0.71 | 0.16 | 0.24 |
9435739 | 9435763 | 24 | 4 | 1 | 5 | 3 | 31 | 34 | 7 | 32 | 0.62 | 0.13 | 0.18 |
9435742 | 9435748 | 6 | 16 | 10 | 26 | 0 | 103 | 103 | 16 | 113 | 0.75 | 0.20 | 0.12 |
9435742 | 9435751 | 9 | 20 | 6 | 26 | 9 | 87 | 96 | 29 | 93 | 0.65 | 0.21 | 0.24 |
9435742 | 9435763 | 21 | 6 | 1 | 7 | 1 | 44 | 45 | 7 | 45 | 0.83 | 0.13 | 0.13 |
9435748 | 9435751 | 3 | 19 | 0 | 19 | 18 | 112 | 130 | 37 | 112 | 0.67 | 0.13 | 0.25 |
9435748 | 9435763 | 15 | 9 | 0 | 9 | 3 | 68 | 71 | 12 | 68 | 0.85 | 0.11 | 0.15 |
9435748 | 9435774 | 26 | 5 | 0 | 5 | 1 | 35 | 36 | 6 | 35 | 0.90 | 0.12 | 0.15 |
9435751 | 9435763 | 12 | 14 | 9 | 23 | 2 | 75 | 77 | 16 | 84 | 0.67 | 0.23 | 0.16 |
9435751 | 9435770 | 19 | 9 | 7 | 16 | 4 | 55 | 59 | 13 | 62 | 0.54 | 0.21 | 0.17 |
9435751 | 9435772 | 21 | 7 | 9 | 16 | 5 | 48 | 53 | 12 | 57 | 0.38 | 0.23 | 0.17 |
9435751 | 9435774 | 23 | 7 | 8 | 15 | 1 | 44 | 45 | 8 | 52 | 0.57 | 0.25 | 0.13 |
9435751 | 9435779 | 28 | 4 | 3 | 7 | 3 | 22 | 25 | 7 | 25 | 0.45 | 0.22 | 0.22 |
9435751 | 9435781 | 30 | 2 | 2 | 4 | 4 | 17 | 21 | 6 | 19 | 0.27 | 0.16 | 0.24 |
9435763 | 9435770 | 7 | 17 | 6 | 23 | 10 | 130 | 140 | 27 | 136 | 0.62 | 0.14 | 0.17 |
9435763 | 9435772 | 9 | 14 | 8 | 22 | 11 | 125 | 136 | 25 | 133 | 0.53 | 0.14 | 0.16 |
9435763 | 9435774 | 11 | 16 | 6 | 22 | 7 | 119 | 126 | 23 | 125 | 0.66 | 0.15 | 0.16 |
9435763 | 9435779 | 16 | 13 | 4 | 17 | 8 | 95 | 103 | 21 | 99 | 0.63 | 0.14 | 0.17 |
9435763 | 9435781 | 18 | 11 | 5 | 16 | 7 | 91 | 98 | 18 | 96 | 0.59 | 0.14 | 0.16 |
9435763 | 9435791 | 28 | 5 | 2 | 7 | 5 | 51 | 56 | 10 | 53 | 0.54 | 0.11 | 0.16 |
9435770 | 9435772 | 2 | 19 | 12 | 31 | 11 | 157 | 168 | 30 | 169 | 0.56 | 0.16 | 0.15 |
9435770 | 9435774 | 4 | 20 | 9 | 29 | 9 | 151 | 160 | 29 | 160 | 0.63 | 0.15 | 0.15 |
9435770 | 9435779 | 9 | 16 | 9 | 25 | 11 | 125 | 136 | 27 | 134 | 0.54 | 0.16 | 0.17 |
9435770 | 9435781 | 11 | 15 | 8 | 23 | 7 | 124 | 131 | 22 | 132 | 0.61 | 0.15 | 0.14 |
9435770 | 9435791 | 21 | 6 | 6 | 12 | 10 | 83 | 93 | 16 | 89 | 0.35 | 0.11 | 0.15 |
9435772 | 9435774 | 2 | 21 | 10 | 31 | 10 | 175 | 185 | 31 | 185 | 0.62 | 0.14 | 0.14 |
9435772 | 9435779 | 7 | 18 | 7 | 25 | 13 | 149 | 162 | 31 | 156 | 0.58 | 0.13 | 0.17 |
9435772 | 9435781 | 9 | 18 | 5 | 23 | 5 | 152 | 157 | 23 | 157 | 0.75 | 0.13 | 0.13 |
9435772 | 9435791 | 19 | 11 | 3 | 14 | 9 | 109 | 118 | 20 | 112 | 0.61 | 0.11 | 0.15 |
9435774 | 9435779 | 5 | 21 | 8 | 29 | 13 | 152 | 165 | 34 | 160 | 0.60 | 0.15 | 0.18 |
9435774 | 9435781 | 7 | 19 | 9 | 28 | 7 | 152 | 159 | 26 | 161 | 0.65 | 0.15 | 0.14 |
9435774 | 9435789 | 15 | 10 | 13 | 23 | 6 | 120 | 126 | 16 | 133 | 0.45 | 0.15 | 0.11 |
9435774 | 9435791 | 17 | 13 | 8 | 21 | 10 | 107 | 117 | 23 | 115 | 0.51 | 0.15 | 0.17 |
9435779 | 9435781 | 2 | 22 | 13 | 35 | 9 | 157 | 166 | 31 | 170 | 0.60 | 0.17 | 0.15 |
9435779 | 9435789 | 10 | 12 | 15 | 27 | 7 | 128 | 135 | 19 | 143 | 0.46 | 0.17 | 0.12 |
9435779 | 9435791 | 12 | 14 | 9 | 23 | 12 | 116 | 128 | 26 | 125 | 0.49 | 0.15 | 0.17 |
9435781 | 9435789 | 8 | 10 | 12 | 22 | 8 | 137 | 145 | 18 | 149 | 0.44 | 0.13 | 0.11 |
9435781 | 9435791 | 10 | 14 | 5 | 19 | 11 | 126 | 137 | 25 | 131 | 0.58 | 0.12 | 0.16 |
9435781 | 9435854 | 73 | 0 | 2 | 2 | 2 | 7 | 9 | 2 | 9 | -0.22 | 0.18 | 0.18 |
9435789 | 9435791 | 2 | 13 | 7 | 20 | 20 | 147 | 167 | 33 | 154 | 0.43 | 0.11 | 0.18 |
9435830 | 9435835 | 5 | 22 | 6 | 28 | 6 | 111 | 117 | 28 | 117 | 0.73 | 0.19 | 0.19 |
9435830 | 9435854 | 24 | 5 | 2 | 7 | 5 | 41 | 46 | 10 | 43 | 0.52 | 0.13 | 0.19 |
9435835 | 9435854 | 19 | 7 | 3 | 10 | 5 | 64 | 69 | 12 | 67 | 0.58 | 0.13 | 0.15 |
9435835 | 9435866 | 31 | 3 | 0 | 3 | 1 | 22 | 23 | 4 | 22 | 0.85 | 0.12 | 0.15 |
9435854 | 9435866 | 12 | 12 | 6 | 18 | 9 | 71 | 80 | 21 | 77 | 0.52 | 0.18 | 0.21 |
9435854 | 9435871 | 17 | 8 | 7 | 15 | 6 | 51 | 57 | 14 | 58 | 0.44 | 0.21 | 0.19 |
9435854 | 9435888 | 34 | 2 | 1 | 3 | 0 | 10 | 10 | 2 | 11 | 0.78 | 0.23 | 0.15 |
9435866 | 9435871 | 5 | 18 | 9 | 27 | 8 | 71 | 79 | 26 | 80 | 0.57 | 0.25 | 0.25 |
9435866 | 9435888 | 22 | 9 | 4 | 13 | 7 | 27 | 34 | 16 | 31 | 0.46 | 0.28 | 0.34 |
9435871 | 9435888 | 17 | 10 | 7 | 17 | 7 | 33 | 40 | 17 | 40 | 0.41 | 0.30 | 0.30 |