r2 Matrix (?)
CpG Pair 1 | CpG Pair 2 | Distance | TT Count | TC Count | T* Count | CT Count | CC Count | C* Count | *T Count | *C Count | R Value | mafA | mafB |
1776504 | 1776507 | 3 | 16 | 5 | 21 | 1 | 8 | 9 | 17 | 13 | 0.60 | 0.30 | 0.43 |
1776504 | 1776520 | 16 | 13 | 5 | 18 | 0 | 8 | 8 | 13 | 13 | 0.67 | 0.31 | 0.50 |
1776504 | 1776530 | 26 | 7 | 2 | 9 | 0 | 4 | 4 | 7 | 6 | 0.72 | 0.31 | 0.46 |
1776507 | 1776520 | 13 | 16 | 1 | 17 | 0 | 15 | 15 | 16 | 16 | 0.94 | 0.47 | 0.50 |
1776507 | 1776530 | 23 | 10 | 0 | 10 | 0 | 9 | 9 | 10 | 9 | 1.00 | 0.47 | 0.47 |
1776507 | 1776533 | 26 | 7 | 0 | 7 | 0 | 8 | 8 | 7 | 8 | 1.00 | 0.47 | 0.47 |
1776520 | 1776530 | 10 | 12 | 1 | 13 | 0 | 15 | 15 | 12 | 16 | 0.93 | 0.46 | 0.43 |
1776520 | 1776533 | 13 | 9 | 1 | 10 | 0 | 14 | 14 | 9 | 15 | 0.92 | 0.42 | 0.38 |
1776530 | 1776533 | 3 | 16 | 0 | 16 | 0 | 20 | 20 | 16 | 20 | 1.00 | 0.44 | 0.44 |
1776530 | 1776543 | 13 | 9 | 0 | 9 | 0 | 12 | 12 | 9 | 12 | 1.00 | 0.43 | 0.43 |
1776530 | 1776549 | 19 | 7 | 0 | 7 | 0 | 10 | 10 | 7 | 10 | 1.00 | 0.41 | 0.41 |
1776530 | 1776555 | 25 | 7 | 0 | 7 | 1 | 5 | 6 | 8 | 5 | 0.85 | 0.46 | 0.38 |
1776533 | 1776543 | 10 | 9 | 0 | 9 | 0 | 13 | 13 | 9 | 13 | 1.00 | 0.41 | 0.41 |
1776533 | 1776549 | 16 | 7 | 0 | 7 | 0 | 11 | 11 | 7 | 11 | 1.00 | 0.39 | 0.39 |
1776533 | 1776555 | 22 | 7 | 0 | 7 | 1 | 6 | 7 | 8 | 6 | 0.87 | 0.50 | 0.43 |
1776543 | 1776549 | 6 | 7 | 0 | 7 | 0 | 15 | 15 | 7 | 15 | 1.00 | 0.32 | 0.32 |
1776543 | 1776555 | 12 | 7 | 0 | 7 | 2 | 9 | 11 | 9 | 9 | 0.80 | 0.39 | 0.50 |
1776543 | 1776558 | 15 | 3 | 0 | 3 | 2 | 7 | 9 | 5 | 7 | 0.68 | 0.25 | 0.42 |
1776549 | 1776555 | 6 | 10 | 0 | 10 | 2 | 9 | 11 | 12 | 9 | 0.83 | 0.48 | 0.43 |
1776549 | 1776558 | 9 | 6 | 0 | 6 | 2 | 7 | 9 | 8 | 7 | 0.76 | 0.40 | 0.47 |
1776555 | 1776558 | 3 | 13 | 1 | 14 | 2 | 8 | 10 | 15 | 9 | 0.74 | 0.42 | 0.38 |
1776555 | 1776569 | 14 | 4 | 6 | 10 | 0 | 6 | 6 | 4 | 12 | 0.45 | 0.38 | 0.25 |
1776558 | 1776569 | 11 | 5 | 8 | 13 | 0 | 6 | 6 | 5 | 14 | 0.41 | 0.32 | 0.26 |
1776569 | 1776589 | 20 | 4 | 2 | 6 | 6 | 6 | 12 | 10 | 8 | 0.16 | 0.33 | 0.44 |
1776589 | 1776610 | 21 | 9 | 1 | 10 | 2 | 1 | 3 | 11 | 2 | 0.27 | 0.23 | 0.15 |
1776610 | 1776619 | 9 | 26 | 0 | 26 | 0 | 4 | 4 | 26 | 4 | 1.00 | 0.13 | 0.13 |
1776610 | 1776630 | 20 | 15 | 2 | 17 | 0 | 4 | 4 | 15 | 6 | 0.77 | 0.19 | 0.29 |
1776619 | 1776630 | 11 | 23 | 4 | 27 | 0 | 4 | 4 | 23 | 8 | 0.65 | 0.13 | 0.26 |
1776619 | 1776639 | 20 | 15 | 2 | 17 | 0 | 3 | 3 | 15 | 5 | 0.73 | 0.15 | 0.25 |
1776630 | 1776639 | 9 | 22 | 0 | 22 | 0 | 8 | 8 | 22 | 8 | 1.00 | 0.27 | 0.27 |
1776630 | 1776649 | 19 | 14 | 0 | 14 | 0 | 5 | 5 | 14 | 5 | 1.00 | 0.26 | 0.26 |
1776630 | 1776653 | 23 | 9 | 0 | 9 | 0 | 3 | 3 | 9 | 3 | 1.00 | 0.25 | 0.25 |
1776639 | 1776649 | 10 | 20 | 0 | 20 | 1 | 10 | 11 | 21 | 10 | 0.93 | 0.35 | 0.32 |
1776639 | 1776653 | 14 | 15 | 0 | 15 | 1 | 7 | 8 | 16 | 7 | 0.91 | 0.35 | 0.30 |
1776649 | 1776653 | 4 | 19 | 0 | 19 | 1 | 9 | 10 | 20 | 9 | 0.93 | 0.34 | 0.31 |
1776682 | 1776685 | 3 | 15 | 0 | 15 | 0 | 6 | 6 | 15 | 6 | 1.00 | 0.29 | 0.29 |
1776766 | 1776778 | 12 | 74 | 4 | 78 | 26 | 26 | 52 | 100 | 30 | 0.52 | 0.40 | 0.23 |
1776766 | 1776786 | 20 | 71 | 9 | 80 | 23 | 28 | 51 | 94 | 37 | 0.47 | 0.39 | 0.28 |
1776766 | 1776794 | 28 | 56 | 4 | 60 | 24 | 19 | 43 | 80 | 23 | 0.44 | 0.42 | 0.22 |
1776766 | 1776800 | 34 | 17 | 2 | 19 | 9 | 10 | 19 | 26 | 12 | 0.45 | 0.50 | 0.32 |
1776778 | 1776786 | 8 | 176 | 20 | 196 | 7 | 60 | 67 | 183 | 80 | 0.75 | 0.25 | 0.30 |
1776778 | 1776794 | 16 | 159 | 13 | 172 | 31 | 33 | 64 | 190 | 46 | 0.49 | 0.27 | 0.19 |
1776778 | 1776800 | 22 | 112 | 12 | 124 | 8 | 41 | 49 | 120 | 53 | 0.72 | 0.28 | 0.31 |
1776786 | 1776794 | 8 | 235 | 11 | 246 | 54 | 63 | 117 | 289 | 74 | 0.57 | 0.32 | 0.20 |
1776786 | 1776800 | 14 | 188 | 11 | 199 | 24 | 76 | 100 | 212 | 87 | 0.73 | 0.33 | 0.29 |
1776786 | 1776814 | 28 | 74 | 4 | 78 | 12 | 28 | 40 | 86 | 32 | 0.69 | 0.34 | 0.27 |
1776786 | 1776819 | 33 | 25 | 5 | 30 | 14 | 9 | 23 | 39 | 14 | 0.25 | 0.43 | 0.26 |
1776794 | 1776800 | 6 | 288 | 51 | 339 | 16 | 63 | 79 | 304 | 114 | 0.57 | 0.19 | 0.27 |
1776794 | 1776814 | 20 | 166 | 23 | 189 | 11 | 36 | 47 | 177 | 59 | 0.59 | 0.20 | 0.25 |
1776794 | 1776819 | 25 | 125 | 12 | 137 | 9 | 26 | 35 | 134 | 38 | 0.64 | 0.20 | 0.22 |
1776794 | 1776823 | 29 | 63 | 12 | 75 | 2 | 13 | 15 | 65 | 25 | 0.59 | 0.17 | 0.28 |
1776794 | 1776826 | 32 | 42 | 4 | 46 | 3 | 8 | 11 | 45 | 12 | 0.62 | 0.19 | 0.21 |
1776794 | 1776829 | 35 | 8 | 2 | 10 | 4 | 2 | 6 | 12 | 4 | 0.15 | 0.38 | 0.25 |
1776800 | 1776814 | 14 | 242 | 16 | 258 | 18 | 68 | 86 | 260 | 84 | 0.73 | 0.25 | 0.24 |
1776800 | 1776819 | 19 | 195 | 9 | 204 | 27 | 47 | 74 | 222 | 56 | 0.65 | 0.27 | 0.20 |
1776800 | 1776823 | 23 | 137 | 10 | 147 | 11 | 39 | 50 | 148 | 49 | 0.72 | 0.25 | 0.25 |
1776800 | 1776826 | 26 | 115 | 6 | 121 | 13 | 29 | 42 | 128 | 35 | 0.68 | 0.26 | 0.21 |
1776800 | 1776829 | 29 | 82 | 4 | 86 | 13 | 20 | 33 | 95 | 24 | 0.62 | 0.28 | 0.20 |
1776814 | 1776819 | 5 | 325 | 20 | 345 | 49 | 82 | 131 | 374 | 102 | 0.62 | 0.28 | 0.21 |
1776814 | 1776823 | 9 | 262 | 27 | 289 | 29 | 77 | 106 | 291 | 104 | 0.64 | 0.27 | 0.26 |
1776814 | 1776826 | 12 | 244 | 16 | 260 | 26 | 73 | 99 | 270 | 89 | 0.70 | 0.28 | 0.25 |
1776814 | 1776829 | 15 | 209 | 15 | 224 | 29 | 57 | 86 | 238 | 72 | 0.63 | 0.28 | 0.23 |
1776814 | 1776836 | 22 | 127 | 8 | 135 | 12 | 47 | 59 | 139 | 55 | 0.75 | 0.30 | 0.28 |
1776819 | 1776823 | 4 | 315 | 48 | 363 | 28 | 69 | 97 | 343 | 117 | 0.54 | 0.21 | 0.25 |
1776819 | 1776826 | 7 | 294 | 40 | 334 | 30 | 60 | 90 | 324 | 100 | 0.53 | 0.21 | 0.24 |
1776819 | 1776829 | 10 | 255 | 39 | 294 | 32 | 49 | 81 | 287 | 88 | 0.46 | 0.22 | 0.23 |
1776819 | 1776836 | 17 | 177 | 23 | 200 | 15 | 46 | 61 | 192 | 69 | 0.61 | 0.23 | 0.26 |
1776823 | 1776826 | 3 | 345 | 35 | 380 | 44 | 83 | 127 | 389 | 118 | 0.58 | 0.25 | 0.23 |
1776823 | 1776829 | 6 | 302 | 41 | 343 | 49 | 65 | 114 | 351 | 106 | 0.46 | 0.25 | 0.23 |
1776823 | 1776836 | 13 | 224 | 30 | 254 | 29 | 58 | 87 | 253 | 88 | 0.55 | 0.26 | 0.26 |
1776823 | 1776858 | 35 | 5 | 1 | 6 | 1 | 4 | 5 | 6 | 5 | 0.63 | 0.45 | 0.45 |
1776826 | 1776829 | 3 | 355 | 47 | 402 | 46 | 81 | 127 | 401 | 128 | 0.52 | 0.24 | 0.24 |
1776826 | 1776836 | 10 | 287 | 30 | 317 | 24 | 75 | 99 | 311 | 105 | 0.65 | 0.24 | 0.25 |
1776826 | 1776858 | 32 | 49 | 17 | 66 | 3 | 19 | 22 | 52 | 36 | 0.53 | 0.25 | 0.41 |
1776829 | 1776836 | 7 | 333 | 28 | 361 | 31 | 89 | 120 | 364 | 117 | 0.67 | 0.25 | 0.24 |
1776829 | 1776858 | 29 | 90 | 26 | 116 | 12 | 29 | 41 | 102 | 55 | 0.45 | 0.26 | 0.35 |
1776836 | 1776858 | 22 | 175 | 39 | 214 | 10 | 49 | 59 | 185 | 88 | 0.57 | 0.22 | 0.32 |
1776836 | 1776867 | 31 | 48 | 1 | 49 | 5 | 11 | 16 | 53 | 12 | 0.74 | 0.25 | 0.18 |
1776858 | 1776867 | 9 | 265 | 8 | 273 | 49 | 66 | 115 | 314 | 74 | 0.63 | 0.30 | 0.19 |
1776858 | 1776873 | 15 | 188 | 18 | 206 | 51 | 36 | 87 | 239 | 54 | 0.39 | 0.30 | 0.18 |
1776858 | 1776884 | 26 | 73 | 13 | 86 | 20 | 16 | 36 | 93 | 29 | 0.31 | 0.30 | 0.24 |
1776858 | 1776892 | 34 | 7 | 1 | 8 | 7 | 1 | 8 | 14 | 2 | 0.00 | 0.50 | 0.12 |
1776867 | 1776873 | 6 | 305 | 25 | 330 | 28 | 44 | 72 | 333 | 69 | 0.54 | 0.18 | 0.17 |
1776867 | 1776884 | 17 | 167 | 26 | 193 | 9 | 29 | 38 | 176 | 55 | 0.55 | 0.16 | 0.24 |
1776867 | 1776892 | 25 | 91 | 12 | 103 | 14 | 8 | 22 | 105 | 20 | 0.26 | 0.18 | 0.16 |
1776873 | 1776884 | 11 | 215 | 42 | 257 | 18 | 34 | 52 | 233 | 76 | 0.43 | 0.17 | 0.25 |
1776873 | 1776892 | 19 | 149 | 23 | 172 | 24 | 9 | 33 | 173 | 32 | 0.14 | 0.16 | 0.16 |
1776873 | 1776903 | 30 | 63 | 6 | 69 | 4 | 6 | 10 | 67 | 12 | 0.47 | 0.13 | 0.15 |
1776884 | 1776892 | 8 | 240 | 25 | 265 | 70 | 28 | 98 | 310 | 53 | 0.24 | 0.27 | 0.15 |
1776884 | 1776903 | 19 | 169 | 4 | 173 | 38 | 28 | 66 | 207 | 32 | 0.53 | 0.28 | 0.13 |
1776884 | 1776909 | 25 | 100 | 15 | 115 | 22 | 21 | 43 | 122 | 36 | 0.38 | 0.27 | 0.23 |
1776884 | 1776919 | 35 | 6 | 2 | 8 | 0 | 3 | 3 | 6 | 5 | 0.67 | 0.27 | 0.45 |
1776892 | 1776903 | 11 | 290 | 31 | 321 | 32 | 19 | 51 | 322 | 50 | 0.28 | 0.14 | 0.13 |
1776892 | 1776909 | 17 | 213 | 41 | 254 | 15 | 23 | 38 | 228 | 64 | 0.36 | 0.13 | 0.22 |
1776892 | 1776919 | 27 | 107 | 20 | 127 | 8 | 11 | 19 | 115 | 31 | 0.35 | 0.13 | 0.21 |
1776892 | 1776924 | 32 | 58 | 16 | 74 | 4 | 9 | 13 | 62 | 25 | 0.38 | 0.15 | 0.29 |
1776903 | 1776909 | 6 | 349 | 55 | 404 | 15 | 37 | 52 | 364 | 92 | 0.46 | 0.11 | 0.20 |
1776903 | 1776919 | 16 | 248 | 24 | 272 | 9 | 28 | 37 | 257 | 52 | 0.58 | 0.12 | 0.17 |
1776903 | 1776924 | 21 | 192 | 29 | 221 | 3 | 25 | 28 | 195 | 54 | 0.58 | 0.11 | 0.22 |
1776909 | 1776919 | 10 | 314 | 25 | 339 | 30 | 57 | 87 | 344 | 82 | 0.59 | 0.20 | 0.19 |
1776909 | 1776924 | 15 | 256 | 36 | 292 | 23 | 51 | 74 | 279 | 87 | 0.53 | 0.20 | 0.24 |
1776909 | 1776937 | 28 | 102 | 21 | 123 | 7 | 23 | 30 | 109 | 44 | 0.52 | 0.20 | 0.29 |
1776919 | 1776924 | 5 | 361 | 50 | 411 | 26 | 60 | 86 | 387 | 110 | 0.53 | 0.17 | 0.22 |
1776919 | 1776937 | 18 | 200 | 36 | 236 | 16 | 35 | 51 | 216 | 71 | 0.47 | 0.18 | 0.25 |
1776924 | 1776937 | 13 | 228 | 32 | 260 | 24 | 56 | 80 | 252 | 88 | 0.56 | 0.24 | 0.26 |