r2 Matrix (?)
CpG Pair 1 | CpG Pair 2 | Distance | TT Count | TC Count | T* Count | CT Count | CC Count | C* Count | *T Count | *C Count | R Value | mafA | mafB |
129869077 | 129869089 | 12 | 41 | 22 | 63 | 15 | 73 | 88 | 56 | 95 | 0.49 | 0.42 | 0.37 |
129869077 | 129869113 | 36 | 19 | 6 | 25 | 8 | 18 | 26 | 27 | 24 | 0.45 | 0.49 | 0.47 |
129869077 | 129869115 | 38 | 19 | 6 | 25 | 11 | 15 | 26 | 30 | 21 | 0.34 | 0.49 | 0.41 |
129869077 | 129869134 | 57 | 4 | 1 | 5 | 3 | 5 | 8 | 7 | 6 | 0.41 | 0.38 | 0.46 |
129869077 | 129869144 | 67 | 2 | 2 | 4 | 0 | 8 | 8 | 2 | 10 | 0.63 | 0.33 | 0.17 |
129869089 | 129869113 | 24 | 49 | 19 | 68 | 34 | 76 | 110 | 83 | 95 | 0.40 | 0.38 | 0.47 |
129869089 | 129869115 | 26 | 38 | 19 | 57 | 28 | 65 | 93 | 66 | 84 | 0.36 | 0.38 | 0.44 |
129869113 | 129869115 | 2 | 94 | 43 | 137 | 33 | 111 | 144 | 127 | 154 | 0.46 | 0.49 | 0.45 |
129869113 | 129869134 | 21 | 24 | 5 | 29 | 12 | 32 | 44 | 36 | 37 | 0.54 | 0.40 | 0.49 |
129869113 | 129869144 | 31 | 7 | 8 | 15 | 1 | 18 | 19 | 8 | 26 | 0.48 | 0.44 | 0.24 |
129869113 | 129869147 | 34 | 4 | 4 | 8 | 1 | 5 | 6 | 5 | 9 | 0.34 | 0.43 | 0.36 |
129869113 | 129869180 | 67 | 3 | 1 | 4 | 2 | 11 | 13 | 5 | 12 | 0.56 | 0.24 | 0.29 |
129869113 | 129869189 | 76 | 2 | 4 | 6 | 2 | 15 | 17 | 4 | 19 | 0.25 | 0.26 | 0.17 |
129869113 | 129869200 | 87 | 3 | 3 | 6 | 3 | 12 | 15 | 6 | 15 | 0.30 | 0.29 | 0.29 |
129869113 | 129869206 | 93 | 1 | 4 | 5 | 1 | 9 | 10 | 2 | 13 | 0.14 | 0.33 | 0.13 |
129869115 | 129869134 | 19 | 22 | 5 | 27 | 16 | 38 | 54 | 38 | 43 | 0.49 | 0.33 | 0.47 |
129869115 | 129869144 | 29 | 7 | 7 | 14 | 1 | 27 | 28 | 8 | 34 | 0.56 | 0.33 | 0.19 |
129869115 | 129869147 | 32 | 4 | 3 | 7 | 3 | 13 | 16 | 7 | 16 | 0.38 | 0.30 | 0.30 |
129869115 | 129869180 | 65 | 3 | 0 | 3 | 1 | 11 | 12 | 4 | 11 | 0.83 | 0.20 | 0.27 |
129869115 | 129869189 | 74 | 1 | 2 | 3 | 3 | 15 | 18 | 4 | 17 | 0.15 | 0.14 | 0.19 |
129869115 | 129869200 | 85 | 3 | 0 | 3 | 3 | 17 | 20 | 6 | 17 | 0.65 | 0.13 | 0.26 |
129869134 | 129869144 | 10 | 37 | 40 | 77 | 13 | 86 | 99 | 50 | 126 | 0.38 | 0.44 | 0.28 |
129869134 | 129869147 | 13 | 34 | 35 | 69 | 19 | 66 | 85 | 53 | 101 | 0.28 | 0.45 | 0.34 |
129869134 | 129869162 | 28 | 19 | 19 | 38 | 16 | 49 | 65 | 35 | 68 | 0.26 | 0.37 | 0.34 |
129869134 | 129869189 | 55 | 0 | 5 | 5 | 4 | 10 | 14 | 4 | 15 | -0.31 | 0.26 | 0.21 |
129869134 | 129869200 | 66 | 12 | 6 | 18 | 6 | 29 | 35 | 18 | 35 | 0.49 | 0.34 | 0.34 |
129869134 | 129869206 | 72 | 11 | 6 | 17 | 4 | 29 | 33 | 15 | 35 | 0.54 | 0.34 | 0.30 |
129869134 | 129869211 | 77 | 8 | 15 | 23 | 3 | 33 | 36 | 11 | 48 | 0.33 | 0.39 | 0.19 |
129869134 | 129869226 | 92 | 6 | 15 | 21 | 4 | 23 | 27 | 10 | 38 | 0.17 | 0.44 | 0.21 |
129869144 | 129869147 | 3 | 66 | 37 | 103 | 44 | 151 | 195 | 110 | 188 | 0.41 | 0.35 | 0.37 |
129869144 | 129869162 | 18 | 62 | 24 | 86 | 34 | 127 | 161 | 96 | 151 | 0.50 | 0.35 | 0.39 |
129869144 | 129869171 | 27 | 24 | 18 | 42 | 14 | 55 | 69 | 38 | 73 | 0.38 | 0.38 | 0.34 |
129869144 | 129869189 | 45 | 1 | 3 | 4 | 4 | 9 | 13 | 5 | 12 | -0.05 | 0.24 | 0.29 |
129869144 | 129869200 | 56 | 10 | 9 | 19 | 17 | 42 | 59 | 27 | 51 | 0.21 | 0.24 | 0.35 |
129869144 | 129869206 | 62 | 11 | 10 | 21 | 15 | 48 | 63 | 26 | 58 | 0.27 | 0.25 | 0.31 |
129869144 | 129869211 | 67 | 13 | 13 | 26 | 12 | 60 | 72 | 25 | 73 | 0.34 | 0.27 | 0.26 |
129869144 | 129869226 | 82 | 10 | 16 | 26 | 12 | 51 | 63 | 22 | 67 | 0.20 | 0.29 | 0.25 |
129869147 | 129869162 | 15 | 64 | 33 | 97 | 38 | 128 | 166 | 102 | 161 | 0.43 | 0.37 | 0.39 |
129869147 | 129869171 | 24 | 29 | 18 | 47 | 14 | 65 | 79 | 43 | 83 | 0.45 | 0.37 | 0.34 |
129869147 | 129869180 | 33 | 4 | 4 | 8 | 3 | 12 | 15 | 7 | 16 | 0.31 | 0.35 | 0.30 |
129869147 | 129869189 | 42 | 3 | 1 | 4 | 1 | 7 | 8 | 4 | 8 | 0.62 | 0.33 | 0.33 |
129869147 | 129869200 | 53 | 13 | 8 | 21 | 14 | 39 | 53 | 27 | 47 | 0.33 | 0.28 | 0.36 |
129869147 | 129869206 | 59 | 15 | 7 | 22 | 10 | 50 | 60 | 25 | 57 | 0.50 | 0.27 | 0.30 |
129869147 | 129869211 | 64 | 15 | 12 | 27 | 9 | 60 | 69 | 24 | 72 | 0.44 | 0.28 | 0.25 |
129869147 | 129869226 | 79 | 12 | 14 | 26 | 11 | 52 | 63 | 23 | 66 | 0.30 | 0.29 | 0.26 |
129869162 | 129869171 | 9 | 36 | 29 | 65 | 19 | 73 | 92 | 55 | 102 | 0.36 | 0.41 | 0.35 |
129869162 | 129869180 | 18 | 14 | 9 | 23 | 8 | 22 | 30 | 22 | 31 | 0.34 | 0.43 | 0.42 |
129869162 | 129869189 | 27 | 8 | 5 | 13 | 5 | 14 | 19 | 13 | 19 | 0.35 | 0.41 | 0.41 |
129869162 | 129869200 | 38 | 13 | 6 | 19 | 8 | 37 | 45 | 21 | 43 | 0.49 | 0.30 | 0.33 |
129869162 | 129869206 | 44 | 16 | 7 | 23 | 5 | 45 | 50 | 21 | 52 | 0.61 | 0.32 | 0.29 |
129869162 | 129869211 | 49 | 16 | 13 | 29 | 7 | 52 | 59 | 23 | 65 | 0.46 | 0.33 | 0.26 |
129869162 | 129869226 | 64 | 13 | 14 | 27 | 8 | 51 | 59 | 21 | 65 | 0.37 | 0.31 | 0.24 |
129869171 | 129869180 | 9 | 43 | 9 | 52 | 10 | 60 | 70 | 53 | 69 | 0.68 | 0.43 | 0.43 |
129869171 | 129869189 | 18 | 23 | 19 | 42 | 9 | 46 | 55 | 32 | 65 | 0.41 | 0.43 | 0.33 |
129869171 | 129869200 | 29 | 19 | 10 | 29 | 5 | 31 | 36 | 24 | 41 | 0.53 | 0.45 | 0.37 |
129869171 | 129869206 | 35 | 5 | 4 | 9 | 3 | 16 | 19 | 8 | 20 | 0.41 | 0.32 | 0.29 |
129869171 | 129869211 | 40 | 7 | 5 | 12 | 3 | 16 | 19 | 10 | 21 | 0.44 | 0.39 | 0.32 |
129869171 | 129869226 | 55 | 8 | 6 | 14 | 3 | 17 | 20 | 11 | 23 | 0.44 | 0.41 | 0.32 |
129869180 | 129869189 | 9 | 33 | 27 | 60 | 10 | 80 | 90 | 43 | 107 | 0.47 | 0.40 | 0.29 |
129869180 | 129869200 | 20 | 24 | 14 | 38 | 5 | 63 | 68 | 29 | 77 | 0.60 | 0.36 | 0.27 |
129869180 | 129869206 | 26 | 8 | 13 | 21 | 4 | 40 | 44 | 12 | 53 | 0.35 | 0.32 | 0.18 |
129869180 | 129869211 | 31 | 4 | 10 | 14 | 2 | 31 | 33 | 6 | 41 | 0.31 | 0.30 | 0.13 |
129869180 | 129869226 | 46 | 4 | 1 | 5 | 2 | 7 | 9 | 6 | 8 | 0.56 | 0.36 | 0.43 |
129869189 | 129869200 | 11 | 38 | 15 | 53 | 15 | 100 | 115 | 53 | 115 | 0.59 | 0.32 | 0.32 |
129869189 | 129869206 | 17 | 20 | 21 | 41 | 14 | 72 | 86 | 34 | 93 | 0.34 | 0.32 | 0.27 |
129869189 | 129869211 | 22 | 15 | 22 | 37 | 3 | 68 | 71 | 18 | 90 | 0.46 | 0.34 | 0.17 |
129869200 | 129869206 | 6 | 70 | 45 | 115 | 28 | 178 | 206 | 98 | 223 | 0.49 | 0.36 | 0.31 |
129869200 | 129869211 | 11 | 57 | 52 | 109 | 14 | 177 | 191 | 71 | 229 | 0.51 | 0.36 | 0.24 |
129869200 | 129869226 | 26 | 36 | 34 | 70 | 11 | 98 | 109 | 47 | 132 | 0.46 | 0.39 | 0.26 |
129869200 | 129869260 | 60 | 1 | 2 | 3 | 5 | 4 | 9 | 6 | 6 | -0.19 | 0.25 | 0.50 |
129869200 | 129869264 | 64 | 1 | 1 | 2 | 1 | 8 | 9 | 2 | 9 | 0.39 | 0.18 | 0.18 |
129869200 | 129869270 | 70 | 2 | 2 | 4 | 1 | 10 | 11 | 3 | 12 | 0.45 | 0.27 | 0.20 |
129869200 | 129869278 | 78 | 3 | 0 | 3 | 6 | 4 | 10 | 9 | 4 | 0.36 | 0.23 | 0.31 |
129869200 | 129869282 | 82 | 3 | 0 | 3 | 2 | 7 | 9 | 5 | 7 | 0.68 | 0.25 | 0.42 |
129869206 | 129869211 | 5 | 60 | 44 | 104 | 21 | 204 | 225 | 81 | 248 | 0.52 | 0.32 | 0.25 |
129869206 | 129869226 | 20 | 39 | 28 | 67 | 22 | 118 | 140 | 61 | 146 | 0.44 | 0.32 | 0.29 |
129869206 | 129869260 | 54 | 3 | 1 | 4 | 3 | 4 | 7 | 6 | 5 | 0.31 | 0.36 | 0.45 |
129869206 | 129869270 | 64 | 3 | 2 | 5 | 2 | 10 | 12 | 5 | 12 | 0.43 | 0.29 | 0.29 |
129869206 | 129869278 | 72 | 4 | 0 | 4 | 7 | 5 | 12 | 11 | 5 | 0.39 | 0.25 | 0.31 |
129869206 | 129869282 | 76 | 4 | 0 | 4 | 2 | 10 | 12 | 6 | 10 | 0.74 | 0.25 | 0.38 |
129869206 | 129869288 | 82 | 4 | 0 | 4 | 2 | 7 | 9 | 6 | 7 | 0.72 | 0.31 | 0.46 |
129869211 | 129869226 | 15 | 47 | 34 | 81 | 34 | 137 | 171 | 81 | 171 | 0.38 | 0.32 | 0.32 |
129869211 | 129869270 | 59 | 3 | 1 | 4 | 2 | 11 | 13 | 5 | 12 | 0.56 | 0.24 | 0.29 |
129869211 | 129869278 | 67 | 4 | 0 | 4 | 8 | 5 | 13 | 12 | 5 | 0.36 | 0.24 | 0.29 |
129869211 | 129869282 | 71 | 3 | 1 | 4 | 3 | 10 | 13 | 6 | 11 | 0.46 | 0.24 | 0.35 |
129869211 | 129869288 | 77 | 4 | 0 | 4 | 3 | 7 | 10 | 7 | 7 | 0.63 | 0.29 | 0.50 |
129869226 | 129869254 | 28 | 1 | 2 | 3 | 8 | 11 | 19 | 9 | 13 | -0.06 | 0.14 | 0.41 |
129869226 | 129869270 | 44 | 3 | 3 | 6 | 1 | 7 | 8 | 4 | 10 | 0.41 | 0.43 | 0.29 |
129869226 | 129869278 | 52 | 6 | 0 | 6 | 4 | 4 | 8 | 10 | 4 | 0.55 | 0.43 | 0.29 |
129869226 | 129869282 | 56 | 4 | 2 | 6 | 1 | 7 | 8 | 5 | 9 | 0.56 | 0.43 | 0.36 |
129869226 | 129869288 | 62 | 5 | 1 | 6 | 1 | 6 | 7 | 6 | 7 | 0.69 | 0.46 | 0.46 |
129869254 | 129869260 | 6 | 18 | 9 | 27 | 3 | 19 | 22 | 21 | 28 | 0.53 | 0.45 | 0.43 |
129869254 | 129869264 | 10 | 12 | 12 | 24 | 0 | 20 | 20 | 12 | 32 | 0.56 | 0.45 | 0.27 |
129869254 | 129869270 | 16 | 11 | 13 | 24 | 1 | 15 | 16 | 12 | 28 | 0.42 | 0.40 | 0.30 |
129869254 | 129869278 | 24 | 15 | 1 | 16 | 6 | 5 | 11 | 21 | 6 | 0.46 | 0.41 | 0.22 |
129869254 | 129869282 | 28 | 8 | 7 | 15 | 1 | 6 | 7 | 9 | 13 | 0.37 | 0.32 | 0.41 |
129869260 | 129869264 | 4 | 9 | 12 | 21 | 5 | 27 | 32 | 14 | 39 | 0.30 | 0.40 | 0.26 |
129869260 | 129869270 | 10 | 13 | 10 | 23 | 2 | 26 | 28 | 15 | 36 | 0.54 | 0.45 | 0.29 |
129869260 | 129869278 | 18 | 16 | 3 | 19 | 13 | 6 | 19 | 29 | 9 | 0.19 | 0.50 | 0.24 |
129869260 | 129869282 | 22 | 8 | 9 | 17 | 7 | 9 | 16 | 15 | 18 | 0.03 | 0.48 | 0.45 |
129869260 | 129869288 | 28 | 6 | 4 | 10 | 5 | 2 | 7 | 11 | 6 | -0.12 | 0.41 | 0.35 |
129869264 | 129869270 | 6 | 5 | 10 | 15 | 9 | 29 | 38 | 14 | 39 | 0.10 | 0.28 | 0.26 |
129869264 | 129869278 | 14 | 10 | 0 | 10 | 21 | 9 | 30 | 31 | 9 | 0.31 | 0.25 | 0.23 |
129869264 | 129869282 | 18 | 4 | 5 | 9 | 9 | 16 | 25 | 13 | 21 | 0.08 | 0.26 | 0.38 |
129869264 | 129869288 | 24 | 4 | 0 | 4 | 6 | 8 | 14 | 10 | 8 | 0.48 | 0.22 | 0.44 |
129869270 | 129869278 | 8 | 15 | 3 | 18 | 29 | 15 | 44 | 44 | 18 | 0.17 | 0.29 | 0.29 |
129869270 | 129869282 | 12 | 9 | 6 | 15 | 11 | 30 | 41 | 20 | 36 | 0.31 | 0.27 | 0.36 |
129869270 | 129869288 | 18 | 5 | 6 | 11 | 11 | 18 | 29 | 16 | 24 | 0.07 | 0.28 | 0.40 |
129869278 | 129869282 | 4 | 17 | 21 | 38 | 2 | 15 | 17 | 19 | 36 | 0.32 | 0.31 | 0.35 |
129869278 | 129869288 | 10 | 16 | 10 | 26 | 0 | 14 | 14 | 16 | 24 | 0.60 | 0.35 | 0.40 |
129869282 | 129869288 | 6 | 13 | 6 | 19 | 6 | 20 | 26 | 19 | 26 | 0.45 | 0.42 | 0.42 |
129869314 | 129869343 | 29 | 11 | 1 | 12 | 5 | 5 | 10 | 16 | 6 | 0.47 | 0.45 | 0.27 |
129869314 | 129869346 | 32 | 4 | 0 | 4 | 3 | 4 | 7 | 7 | 4 | 0.57 | 0.36 | 0.36 |
129869314 | 129869371 | 57 | 11 | 4 | 15 | 3 | 10 | 13 | 14 | 14 | 0.50 | 0.46 | 0.50 |
129869314 | 129869374 | 60 | 11 | 2 | 13 | 5 | 8 | 13 | 16 | 10 | 0.47 | 0.50 | 0.38 |
129869343 | 129869346 | 3 | 34 | 8 | 42 | 5 | 7 | 12 | 39 | 15 | 0.36 | 0.22 | 0.28 |
129869343 | 129869371 | 28 | 17 | 1 | 18 | 1 | 6 | 7 | 18 | 7 | 0.80 | 0.28 | 0.28 |
129869343 | 129869374 | 31 | 12 | 0 | 12 | 2 | 3 | 5 | 14 | 3 | 0.72 | 0.29 | 0.18 |
129869346 | 129869371 | 25 | 16 | 1 | 17 | 2 | 6 | 8 | 18 | 7 | 0.72 | 0.32 | 0.28 |
129869346 | 129869374 | 28 | 13 | 0 | 13 | 1 | 3 | 4 | 14 | 3 | 0.83 | 0.24 | 0.18 |
129869371 | 129869374 | 3 | 47 | 8 | 55 | 8 | 18 | 26 | 55 | 26 | 0.55 | 0.32 | 0.32 |