r2 Matrix (?)
CpG Pair 1 | CpG Pair 2 | Distance | TT Count | TC Count | T* Count | CT Count | CC Count | C* Count | *T Count | *C Count | R Value | mafA | mafB |
1887398 | 1887410 | 12 | 11 | 1 | 12 | 1 | 3 | 4 | 12 | 4 | 0.67 | 0.25 | 0.25 |
1887410 | 1887425 | 15 | 8 | 6 | 14 | 3 | 2 | 5 | 11 | 8 | -0.03 | 0.26 | 0.42 |
1887410 | 1887434 | 24 | 6 | 5 | 11 | 1 | 1 | 2 | 7 | 6 | 0.03 | 0.15 | 0.46 |
1887425 | 1887434 | 9 | 15 | 2 | 17 | 0 | 18 | 18 | 15 | 20 | 0.89 | 0.49 | 0.43 |
1887425 | 1887447 | 22 | 8 | 3 | 11 | 2 | 10 | 12 | 10 | 13 | 0.56 | 0.48 | 0.43 |
1887434 | 1887447 | 13 | 11 | 2 | 13 | 4 | 14 | 18 | 15 | 16 | 0.62 | 0.42 | 0.48 |
1887434 | 1887461 | 27 | 7 | 0 | 7 | 2 | 2 | 4 | 9 | 2 | 0.62 | 0.36 | 0.18 |
1887447 | 1887461 | 14 | 12 | 1 | 13 | 4 | 14 | 18 | 16 | 15 | 0.69 | 0.42 | 0.48 |
1887447 | 1887475 | 28 | 2 | 1 | 3 | 2 | 9 | 11 | 4 | 10 | 0.44 | 0.21 | 0.29 |
1887461 | 1887475 | 14 | 15 | 5 | 20 | 4 | 14 | 18 | 19 | 19 | 0.53 | 0.47 | 0.50 |
1887461 | 1887488 | 27 | 9 | 0 | 9 | 3 | 3 | 6 | 12 | 3 | 0.61 | 0.40 | 0.20 |
1887475 | 1887488 | 13 | 21 | 1 | 22 | 11 | 8 | 19 | 32 | 9 | 0.45 | 0.46 | 0.22 |
1887475 | 1887499 | 24 | 8 | 0 | 8 | 7 | 4 | 11 | 15 | 4 | 0.44 | 0.42 | 0.21 |
1887488 | 1887499 | 11 | 18 | 7 | 25 | 4 | 3 | 7 | 22 | 10 | 0.13 | 0.22 | 0.31 |
1887488 | 1887506 | 18 | 12 | 6 | 18 | 3 | 2 | 5 | 15 | 8 | 0.06 | 0.22 | 0.35 |
1887499 | 1887506 | 7 | 17 | 1 | 18 | 0 | 12 | 12 | 17 | 13 | 0.93 | 0.40 | 0.43 |
1887499 | 1887515 | 16 | 6 | 2 | 8 | 0 | 9 | 9 | 6 | 11 | 0.78 | 0.47 | 0.35 |
1887506 | 1887515 | 9 | 6 | 3 | 9 | 0 | 9 | 9 | 6 | 12 | 0.71 | 0.50 | 0.33 |
1887535 | 1887538 | 3 | 12 | 12 | 24 | 1 | 2 | 3 | 13 | 14 | 0.10 | 0.11 | 0.48 |
1887535 | 1887552 | 17 | 13 | 8 | 21 | 3 | 0 | 3 | 16 | 8 | -0.27 | 0.12 | 0.33 |
1887535 | 1887561 | 26 | 7 | 4 | 11 | 2 | 1 | 3 | 9 | 5 | -0.03 | 0.21 | 0.36 |
1887538 | 1887552 | 14 | 14 | 0 | 14 | 9 | 9 | 18 | 23 | 9 | 0.55 | 0.44 | 0.28 |
1887538 | 1887561 | 23 | 9 | 0 | 9 | 7 | 6 | 13 | 16 | 6 | 0.51 | 0.41 | 0.27 |
1887552 | 1887561 | 9 | 30 | 3 | 33 | 2 | 9 | 11 | 32 | 12 | 0.71 | 0.25 | 0.27 |
1887552 | 1887567 | 15 | 23 | 5 | 28 | 8 | 0 | 8 | 31 | 5 | -0.21 | 0.22 | 0.14 |
1887552 | 1887571 | 19 | 20 | 6 | 26 | 7 | 0 | 7 | 27 | 6 | -0.24 | 0.21 | 0.18 |
1887561 | 1887567 | 6 | 37 | 4 | 41 | 9 | 4 | 13 | 46 | 8 | 0.25 | 0.24 | 0.15 |
1887561 | 1887571 | 10 | 32 | 8 | 40 | 9 | 2 | 11 | 41 | 10 | -0.02 | 0.22 | 0.20 |
1887567 | 1887571 | 4 | 49 | 5 | 54 | 2 | 6 | 8 | 51 | 11 | 0.58 | 0.13 | 0.18 |
1887571 | 1887599 | 28 | 10 | 6 | 16 | 2 | 0 | 2 | 12 | 6 | -0.25 | 0.11 | 0.33 |
1887599 | 1887605 | 6 | 25 | 0 | 25 | 6 | 4 | 10 | 31 | 4 | 0.57 | 0.29 | 0.11 |
1887599 | 1887607 | 8 | 16 | 7 | 23 | 6 | 3 | 9 | 22 | 10 | 0.03 | 0.28 | 0.31 |
1887599 | 1887626 | 27 | 7 | 2 | 9 | 1 | 2 | 3 | 8 | 4 | 0.41 | 0.25 | 0.33 |
1887605 | 1887607 | 2 | 29 | 9 | 38 | 6 | 1 | 7 | 35 | 10 | -0.08 | 0.16 | 0.22 |
1887605 | 1887626 | 21 | 17 | 4 | 21 | 3 | 1 | 4 | 20 | 5 | 0.06 | 0.16 | 0.20 |
1887626 | 1887654 | 28 | 12 | 6 | 18 | 1 | 13 | 14 | 13 | 19 | 0.60 | 0.44 | 0.41 |
1887626 | 1887657 | 31 | 11 | 2 | 13 | 1 | 9 | 10 | 12 | 11 | 0.74 | 0.43 | 0.48 |
1887626 | 1887659 | 33 | 0 | 6 | 6 | 4 | 3 | 7 | 4 | 9 | -0.62 | 0.46 | 0.31 |
1887654 | 1887657 | 3 | 23 | 0 | 23 | 2 | 23 | 25 | 25 | 23 | 0.92 | 0.48 | 0.48 |
1887654 | 1887659 | 5 | 9 | 9 | 18 | 13 | 7 | 20 | 22 | 16 | -0.15 | 0.47 | 0.42 |
1887654 | 1887667 | 13 | 8 | 3 | 11 | 3 | 8 | 11 | 11 | 11 | 0.46 | 0.50 | 0.50 |
1887657 | 1887659 | 2 | 10 | 10 | 20 | 15 | 8 | 23 | 25 | 18 | -0.15 | 0.47 | 0.42 |
1887657 | 1887667 | 10 | 9 | 3 | 12 | 4 | 11 | 15 | 13 | 14 | 0.48 | 0.44 | 0.48 |
1887657 | 1887675 | 18 | 10 | 0 | 10 | 7 | 2 | 9 | 17 | 2 | 0.36 | 0.47 | 0.11 |
1887659 | 1887667 | 8 | 10 | 9 | 19 | 3 | 5 | 8 | 13 | 14 | 0.14 | 0.30 | 0.48 |
1887659 | 1887675 | 16 | 12 | 0 | 12 | 5 | 2 | 7 | 17 | 2 | 0.45 | 0.37 | 0.11 |
1887667 | 1887675 | 8 | 13 | 1 | 14 | 10 | 2 | 12 | 23 | 3 | 0.15 | 0.46 | 0.12 |
1887675 | 1887678 | 3 | 22 | 2 | 24 | 2 | 1 | 3 | 24 | 3 | 0.25 | 0.11 | 0.11 |
1887678 | 1887701 | 23 | 10 | 2 | 12 | 1 | 1 | 2 | 11 | 3 | 0.28 | 0.14 | 0.21 |
1887701 | 1887729 | 28 | 6 | 2 | 8 | 0 | 6 | 6 | 6 | 8 | 0.75 | 0.43 | 0.43 |
1887729 | 1887741 | 12 | 25 | 1 | 26 | 0 | 12 | 12 | 25 | 13 | 0.94 | 0.32 | 0.34 |
1887729 | 1887745 | 16 | 19 | 4 | 23 | 2 | 9 | 11 | 21 | 13 | 0.62 | 0.32 | 0.38 |
1887741 | 1887745 | 4 | 21 | 3 | 24 | 2 | 18 | 20 | 23 | 21 | 0.77 | 0.45 | 0.48 |
1887745 | 1887769 | 24 | 2 | 3 | 5 | 9 | 1 | 10 | 11 | 4 | -0.53 | 0.33 | 0.27 |
1887745 | 1887771 | 26 | 3 | 2 | 5 | 10 | 0 | 10 | 13 | 2 | -0.56 | 0.33 | 0.13 |