r2 Matrix (?)
CpG Pair 1 | CpG Pair 2 | Distance | TT Count | TC Count | T* Count | CT Count | CC Count | C* Count | *T Count | *C Count | R Value | mafA | mafB |
28173893 | 28173898 | 5 | 16 | 0 | 16 | 0 | 2 | 2 | 16 | 2 | 1.00 | 0.11 | 0.11 |
28173893 | 28173904 | 11 | 16 | 0 | 16 | 0 | 2 | 2 | 16 | 2 | 1.00 | 0.11 | 0.11 |
28173893 | 28173910 | 17 | 14 | 2 | 16 | 0 | 2 | 2 | 14 | 4 | 0.66 | 0.11 | 0.22 |
28173893 | 28173914 | 21 | 12 | 1 | 13 | 0 | 2 | 2 | 12 | 3 | 0.78 | 0.13 | 0.20 |
28173893 | 28173921 | 28 | 12 | 4 | 16 | 0 | 2 | 2 | 12 | 6 | 0.50 | 0.11 | 0.33 |
28173893 | 28173925 | 32 | 12 | 1 | 13 | 1 | 1 | 2 | 13 | 2 | 0.42 | 0.13 | 0.13 |
28173898 | 28173904 | 6 | 28 | 1 | 29 | 1 | 4 | 5 | 29 | 5 | 0.77 | 0.15 | 0.15 |
28173898 | 28173910 | 12 | 25 | 4 | 29 | 1 | 4 | 5 | 26 | 8 | 0.55 | 0.15 | 0.24 |
28173898 | 28173914 | 16 | 24 | 2 | 26 | 1 | 4 | 5 | 25 | 6 | 0.67 | 0.16 | 0.19 |
28173898 | 28173921 | 23 | 23 | 6 | 29 | 2 | 3 | 5 | 25 | 9 | 0.32 | 0.15 | 0.26 |
28173898 | 28173925 | 27 | 23 | 3 | 26 | 2 | 3 | 5 | 25 | 6 | 0.45 | 0.16 | 0.19 |
28173904 | 28173910 | 6 | 41 | 5 | 46 | 1 | 11 | 12 | 42 | 16 | 0.73 | 0.21 | 0.28 |
28173904 | 28173914 | 10 | 40 | 3 | 43 | 2 | 10 | 12 | 42 | 13 | 0.74 | 0.22 | 0.24 |
28173904 | 28173921 | 17 | 37 | 9 | 46 | 4 | 8 | 12 | 41 | 17 | 0.42 | 0.21 | 0.29 |
28173904 | 28173925 | 21 | 37 | 6 | 43 | 2 | 10 | 12 | 39 | 16 | 0.63 | 0.22 | 0.29 |
28173904 | 28173927 | 23 | 37 | 1 | 38 | 6 | 6 | 12 | 43 | 7 | 0.58 | 0.24 | 0.14 |
28173904 | 28173938 | 34 | 10 | 3 | 13 | 0 | 2 | 2 | 10 | 5 | 0.56 | 0.13 | 0.33 |
28173910 | 28173914 | 4 | 54 | 3 | 57 | 9 | 13 | 22 | 63 | 16 | 0.60 | 0.28 | 0.20 |
28173910 | 28173921 | 11 | 53 | 7 | 60 | 4 | 18 | 22 | 57 | 25 | 0.68 | 0.27 | 0.30 |
28173910 | 28173925 | 15 | 51 | 6 | 57 | 8 | 14 | 22 | 59 | 20 | 0.55 | 0.28 | 0.25 |
28173910 | 28173927 | 17 | 52 | 1 | 53 | 12 | 9 | 21 | 64 | 10 | 0.54 | 0.28 | 0.14 |
28173910 | 28173931 | 21 | 16 | 3 | 19 | 7 | 0 | 7 | 23 | 3 | -0.22 | 0.27 | 0.12 |
28173910 | 28173938 | 28 | 25 | 6 | 31 | 1 | 7 | 8 | 26 | 13 | 0.58 | 0.21 | 0.33 |
28173910 | 28173942 | 32 | 18 | 2 | 20 | 2 | 4 | 6 | 20 | 6 | 0.57 | 0.23 | 0.23 |
28173914 | 28173921 | 7 | 56 | 16 | 72 | 5 | 16 | 21 | 61 | 32 | 0.47 | 0.23 | 0.34 |
28173914 | 28173925 | 11 | 62 | 8 | 70 | 1 | 19 | 20 | 63 | 27 | 0.76 | 0.22 | 0.30 |
28173914 | 28173927 | 13 | 66 | 2 | 68 | 11 | 9 | 20 | 77 | 11 | 0.53 | 0.23 | 0.12 |
28173914 | 28173938 | 24 | 32 | 10 | 42 | 0 | 11 | 11 | 32 | 21 | 0.63 | 0.21 | 0.40 |
28173914 | 28173942 | 28 | 29 | 1 | 30 | 0 | 10 | 10 | 29 | 11 | 0.94 | 0.25 | 0.28 |
28173921 | 28173925 | 4 | 70 | 9 | 79 | 16 | 22 | 38 | 86 | 31 | 0.49 | 0.32 | 0.26 |
28173921 | 28173927 | 6 | 75 | 2 | 77 | 25 | 10 | 35 | 100 | 12 | 0.39 | 0.31 | 0.11 |
28173921 | 28173938 | 17 | 49 | 4 | 53 | 1 | 23 | 24 | 50 | 27 | 0.86 | 0.31 | 0.35 |
28173921 | 28173942 | 21 | 39 | 3 | 42 | 10 | 12 | 22 | 49 | 15 | 0.53 | 0.34 | 0.23 |
28173921 | 28173950 | 29 | 21 | 4 | 25 | 3 | 3 | 6 | 24 | 7 | 0.32 | 0.19 | 0.23 |
28173921 | 28173956 | 35 | 12 | 1 | 13 | 1 | 1 | 2 | 13 | 2 | 0.42 | 0.13 | 0.13 |
28173925 | 28173927 | 2 | 85 | 0 | 85 | 19 | 12 | 31 | 104 | 12 | 0.56 | 0.27 | 0.10 |
28173925 | 28173938 | 13 | 53 | 10 | 63 | 1 | 18 | 19 | 54 | 28 | 0.70 | 0.23 | 0.34 |
28173925 | 28173942 | 17 | 50 | 3 | 53 | 4 | 12 | 16 | 54 | 15 | 0.71 | 0.23 | 0.22 |
28173925 | 28173950 | 25 | 27 | 3 | 30 | 2 | 4 | 6 | 29 | 7 | 0.53 | 0.17 | 0.19 |
28173931 | 28173938 | 7 | 15 | 14 | 29 | 3 | 1 | 4 | 18 | 15 | -0.15 | 0.12 | 0.45 |
28173931 | 28173942 | 11 | 14 | 9 | 23 | 3 | 0 | 3 | 17 | 9 | -0.26 | 0.12 | 0.35 |
28173931 | 28173950 | 19 | 6 | 7 | 13 | 2 | 0 | 2 | 8 | 7 | -0.37 | 0.13 | 0.47 |
28173938 | 28173942 | 4 | 86 | 1 | 87 | 19 | 18 | 37 | 105 | 19 | 0.60 | 0.30 | 0.15 |
28173938 | 28173950 | 12 | 69 | 2 | 71 | 10 | 10 | 20 | 79 | 12 | 0.58 | 0.22 | 0.13 |
28173938 | 28173960 | 22 | 48 | 1 | 49 | 5 | 9 | 14 | 53 | 10 | 0.71 | 0.22 | 0.16 |
28173938 | 28173967 | 29 | 34 | 1 | 35 | 6 | 5 | 11 | 40 | 6 | 0.54 | 0.24 | 0.13 |
28173938 | 28173973 | 35 | 11 | 0 | 11 | 3 | 2 | 5 | 14 | 2 | 0.56 | 0.31 | 0.12 |
28173942 | 28173950 | 8 | 100 | 6 | 106 | 4 | 13 | 17 | 104 | 19 | 0.68 | 0.14 | 0.15 |
28173942 | 28173960 | 18 | 74 | 9 | 83 | 4 | 9 | 13 | 78 | 18 | 0.51 | 0.14 | 0.19 |
28173942 | 28173967 | 25 | 62 | 6 | 68 | 5 | 6 | 11 | 67 | 12 | 0.44 | 0.14 | 0.15 |
28173942 | 28173971 | 29 | 46 | 4 | 50 | 7 | 3 | 10 | 53 | 7 | 0.26 | 0.17 | 0.12 |
28173942 | 28173973 | 31 | 38 | 2 | 40 | 4 | 5 | 9 | 42 | 7 | 0.56 | 0.18 | 0.14 |
28173942 | 28173977 | 35 | 9 | 1 | 10 | 1 | 2 | 3 | 10 | 3 | 0.57 | 0.23 | 0.23 |
28173950 | 28173956 | 6 | 144 | 2 | 146 | 10 | 17 | 27 | 154 | 19 | 0.71 | 0.16 | 0.11 |
28173950 | 28173960 | 10 | 119 | 16 | 135 | 10 | 16 | 26 | 129 | 32 | 0.46 | 0.16 | 0.20 |
28173950 | 28173967 | 17 | 113 | 7 | 120 | 10 | 13 | 23 | 123 | 20 | 0.54 | 0.16 | 0.14 |
28173950 | 28173971 | 21 | 99 | 2 | 101 | 12 | 11 | 23 | 111 | 13 | 0.58 | 0.19 | 0.10 |
28173950 | 28173973 | 23 | 91 | 1 | 92 | 9 | 13 | 22 | 100 | 14 | 0.70 | 0.19 | 0.12 |
28173950 | 28173977 | 27 | 58 | 7 | 65 | 10 | 3 | 13 | 68 | 10 | 0.14 | 0.17 | 0.13 |
28173956 | 28173960 | 4 | 149 | 20 | 169 | 2 | 22 | 24 | 151 | 42 | 0.64 | 0.12 | 0.22 |
28173956 | 28173967 | 11 | 146 | 8 | 154 | 3 | 18 | 21 | 149 | 26 | 0.74 | 0.12 | 0.15 |
28173956 | 28173973 | 17 | 119 | 5 | 124 | 10 | 12 | 22 | 129 | 17 | 0.56 | 0.15 | 0.12 |
28173956 | 28173977 | 21 | 84 | 8 | 92 | 8 | 9 | 17 | 92 | 17 | 0.44 | 0.16 | 0.16 |
28173956 | 28173990 | 34 | 15 | 3 | 18 | 1 | 2 | 3 | 16 | 5 | 0.41 | 0.14 | 0.24 |
28173960 | 28173967 | 7 | 155 | 2 | 157 | 17 | 30 | 47 | 172 | 32 | 0.72 | 0.23 | 0.16 |
28173960 | 28173973 | 13 | 127 | 2 | 129 | 25 | 21 | 46 | 152 | 23 | 0.57 | 0.26 | 0.13 |
28173960 | 28173977 | 17 | 96 | 6 | 102 | 20 | 16 | 36 | 116 | 22 | 0.46 | 0.26 | 0.16 |
28173960 | 28173990 | 30 | 31 | 4 | 35 | 2 | 13 | 15 | 33 | 17 | 0.73 | 0.30 | 0.34 |
28173967 | 28173971 | 4 | 173 | 5 | 178 | 19 | 18 | 37 | 192 | 23 | 0.56 | 0.17 | 0.11 |
28173967 | 28173973 | 6 | 161 | 8 | 169 | 16 | 20 | 36 | 177 | 28 | 0.56 | 0.18 | 0.14 |
28173967 | 28173977 | 10 | 132 | 8 | 140 | 10 | 18 | 28 | 142 | 26 | 0.60 | 0.17 | 0.15 |
28173967 | 28173990 | 23 | 53 | 11 | 64 | 5 | 12 | 17 | 58 | 23 | 0.48 | 0.21 | 0.28 |
28173971 | 28173973 | 2 | 173 | 9 | 182 | 4 | 20 | 24 | 177 | 29 | 0.72 | 0.12 | 0.14 |
28173971 | 28173977 | 6 | 134 | 17 | 151 | 9 | 9 | 18 | 143 | 26 | 0.33 | 0.11 | 0.15 |
28173971 | 28173990 | 19 | 56 | 16 | 72 | 3 | 7 | 10 | 59 | 23 | 0.35 | 0.12 | 0.28 |
28173973 | 28173977 | 4 | 130 | 17 | 147 | 14 | 9 | 23 | 144 | 26 | 0.26 | 0.14 | 0.15 |
28173973 | 28173990 | 17 | 55 | 14 | 69 | 4 | 9 | 13 | 59 | 23 | 0.40 | 0.16 | 0.28 |
28173977 | 28173990 | 13 | 56 | 11 | 67 | 3 | 12 | 15 | 59 | 23 | 0.55 | 0.18 | 0.28 |