r2 Matrix (?)
CpG Pair 1 | CpG Pair 2 | Distance | TT Count | TC Count | T* Count | CT Count | CC Count | C* Count | *T Count | *C Count | R Value | mafA | mafB |
3680687 | 3680696 | 9 | 2 | 1 | 3 | 1 | 9 | 10 | 3 | 10 | 0.57 | 0.23 | 0.23 |
3680687 | 3680703 | 16 | 2 | 0 | 2 | 0 | 9 | 9 | 2 | 9 | 1.00 | 0.18 | 0.18 |
3680696 | 3680703 | 7 | 2 | 2 | 4 | 0 | 7 | 7 | 2 | 9 | 0.62 | 0.36 | 0.18 |
3680703 | 3680705 | 2 | 2 | 2 | 4 | 6 | 4 | 10 | 8 | 6 | -0.09 | 0.29 | 0.43 |
3680703 | 3680712 | 9 | 2 | 2 | 4 | 0 | 9 | 9 | 2 | 11 | 0.64 | 0.31 | 0.15 |
3680703 | 3680714 | 11 | 2 | 2 | 4 | 0 | 8 | 8 | 2 | 10 | 0.63 | 0.33 | 0.17 |
3680703 | 3680717 | 14 | 2 | 2 | 4 | 0 | 7 | 7 | 2 | 9 | 0.62 | 0.36 | 0.18 |
3680705 | 3680712 | 7 | 2 | 6 | 8 | 0 | 5 | 5 | 2 | 11 | 0.34 | 0.38 | 0.15 |
3680705 | 3680714 | 9 | 2 | 5 | 7 | 0 | 5 | 5 | 2 | 10 | 0.38 | 0.42 | 0.17 |
3680705 | 3680717 | 12 | 0 | 6 | 6 | 2 | 3 | 5 | 2 | 9 | -0.52 | 0.45 | 0.18 |
3680712 | 3680714 | 2 | 3 | 0 | 3 | 0 | 12 | 12 | 3 | 12 | 1.00 | 0.20 | 0.20 |
3680712 | 3680717 | 5 | 0 | 3 | 3 | 2 | 9 | 11 | 2 | 12 | -0.21 | 0.21 | 0.14 |
3680714 | 3680717 | 3 | 0 | 3 | 3 | 2 | 10 | 12 | 2 | 13 | -0.20 | 0.20 | 0.13 |
3680732 | 3680738 | 6 | 2 | 1 | 3 | 4 | 12 | 16 | 6 | 13 | 0.33 | 0.16 | 0.32 |
3680738 | 3680753 | 15 | 3 | 0 | 3 | 8 | 5 | 13 | 11 | 5 | 0.32 | 0.19 | 0.31 |
3680738 | 3680756 | 18 | 2 | 0 | 2 | 4 | 8 | 12 | 6 | 8 | 0.47 | 0.14 | 0.43 |
3680738 | 3680759 | 21 | 0 | 2 | 2 | 7 | 3 | 10 | 7 | 5 | -0.53 | 0.17 | 0.42 |
3680753 | 3680756 | 3 | 4 | 6 | 10 | 5 | 5 | 10 | 9 | 11 | -0.10 | 0.50 | 0.45 |
3680753 | 3680759 | 6 | 4 | 5 | 9 | 6 | 3 | 9 | 10 | 8 | -0.22 | 0.50 | 0.44 |
3680753 | 3680762 | 9 | 6 | 1 | 7 | 2 | 7 | 9 | 8 | 8 | 0.63 | 0.44 | 0.50 |
3680756 | 3680759 | 3 | 4 | 5 | 9 | 7 | 4 | 11 | 11 | 9 | -0.19 | 0.45 | 0.45 |
3680756 | 3680762 | 6 | 3 | 6 | 9 | 6 | 3 | 9 | 9 | 9 | -0.33 | 0.50 | 0.50 |
3680759 | 3680762 | 3 | 8 | 5 | 13 | 4 | 4 | 8 | 12 | 9 | 0.11 | 0.38 | 0.43 |
3680759 | 3680775 | 16 | 3 | 3 | 6 | 0 | 6 | 6 | 3 | 9 | 0.58 | 0.50 | 0.25 |
3680759 | 3680780 | 21 | 4 | 2 | 6 | 2 | 3 | 5 | 6 | 5 | 0.27 | 0.45 | 0.45 |
3680762 | 3680775 | 13 | 4 | 6 | 10 | 1 | 8 | 9 | 5 | 14 | 0.33 | 0.47 | 0.26 |
3680762 | 3680780 | 18 | 7 | 2 | 9 | 3 | 6 | 9 | 10 | 8 | 0.45 | 0.50 | 0.44 |
3680762 | 3680784 | 22 | 3 | 6 | 9 | 0 | 8 | 8 | 3 | 14 | 0.44 | 0.47 | 0.18 |
3680762 | 3680786 | 24 | 6 | 3 | 9 | 1 | 6 | 7 | 7 | 9 | 0.52 | 0.44 | 0.44 |
3680762 | 3680795 | 33 | 2 | 6 | 8 | 0 | 3 | 3 | 2 | 9 | 0.29 | 0.27 | 0.18 |
3680775 | 3680780 | 5 | 8 | 1 | 9 | 6 | 12 | 18 | 14 | 13 | 0.52 | 0.33 | 0.48 |
3680775 | 3680784 | 9 | 5 | 4 | 9 | 0 | 17 | 17 | 5 | 21 | 0.67 | 0.35 | 0.19 |
3680775 | 3680786 | 11 | 8 | 1 | 9 | 3 | 13 | 16 | 11 | 14 | 0.68 | 0.36 | 0.44 |
3680775 | 3680795 | 20 | 3 | 5 | 8 | 1 | 11 | 12 | 4 | 16 | 0.36 | 0.40 | 0.20 |
3680780 | 3680784 | 4 | 5 | 11 | 16 | 0 | 16 | 16 | 5 | 27 | 0.43 | 0.50 | 0.16 |
3680780 | 3680786 | 6 | 8 | 7 | 15 | 3 | 13 | 16 | 11 | 20 | 0.36 | 0.48 | 0.35 |
3680780 | 3680795 | 15 | 3 | 11 | 14 | 1 | 11 | 12 | 4 | 22 | 0.18 | 0.46 | 0.15 |
3680784 | 3680786 | 2 | 5 | 0 | 5 | 6 | 22 | 28 | 11 | 22 | 0.60 | 0.15 | 0.33 |
3680784 | 3680795 | 11 | 0 | 5 | 5 | 4 | 19 | 23 | 4 | 24 | -0.19 | 0.18 | 0.14 |
3680786 | 3680795 | 9 | 4 | 6 | 10 | 1 | 20 | 21 | 5 | 26 | 0.45 | 0.32 | 0.16 |
3680795 | 3680817 | 22 | 1 | 1 | 2 | 1 | 9 | 10 | 2 | 10 | 0.40 | 0.17 | 0.17 |
3680795 | 3680819 | 24 | 2 | 0 | 2 | 2 | 7 | 9 | 4 | 7 | 0.62 | 0.18 | 0.36 |
3680817 | 3680819 | 2 | 4 | 3 | 7 | 7 | 10 | 17 | 11 | 13 | 0.15 | 0.29 | 0.46 |
3680817 | 3680822 | 5 | 7 | 0 | 7 | 2 | 13 | 15 | 9 | 13 | 0.82 | 0.32 | 0.41 |
3680817 | 3680825 | 8 | 7 | 0 | 7 | 4 | 8 | 12 | 11 | 8 | 0.65 | 0.37 | 0.42 |
3680817 | 3680827 | 10 | 2 | 4 | 6 | 5 | 6 | 11 | 7 | 10 | -0.12 | 0.35 | 0.41 |
3680817 | 3680836 | 19 | 5 | 0 | 5 | 3 | 4 | 7 | 8 | 4 | 0.60 | 0.42 | 0.33 |
3680817 | 3680839 | 22 | 2 | 3 | 5 | 2 | 4 | 6 | 4 | 7 | 0.07 | 0.45 | 0.36 |
3680819 | 3680822 | 3 | 4 | 8 | 12 | 5 | 6 | 11 | 9 | 14 | -0.12 | 0.48 | 0.39 |
3680819 | 3680825 | 6 | 8 | 4 | 12 | 4 | 5 | 9 | 12 | 9 | 0.22 | 0.43 | 0.43 |
3680819 | 3680827 | 8 | 3 | 7 | 10 | 4 | 5 | 9 | 7 | 12 | -0.15 | 0.47 | 0.37 |
3680819 | 3680836 | 17 | 5 | 4 | 9 | 3 | 2 | 5 | 8 | 6 | -0.04 | 0.36 | 0.43 |
3680819 | 3680839 | 20 | 3 | 6 | 9 | 2 | 2 | 4 | 5 | 8 | -0.16 | 0.31 | 0.38 |
3680822 | 3680825 | 3 | 8 | 1 | 9 | 4 | 8 | 12 | 12 | 9 | 0.56 | 0.43 | 0.43 |
3680822 | 3680827 | 5 | 3 | 5 | 8 | 4 | 7 | 11 | 7 | 12 | 0.01 | 0.42 | 0.37 |
3680822 | 3680836 | 14 | 6 | 0 | 6 | 3 | 5 | 8 | 9 | 5 | 0.65 | 0.43 | 0.36 |
3680822 | 3680839 | 17 | 2 | 4 | 6 | 2 | 5 | 7 | 4 | 9 | 0.05 | 0.46 | 0.31 |
3680825 | 3680827 | 2 | 6 | 6 | 12 | 1 | 7 | 8 | 7 | 13 | 0.39 | 0.40 | 0.35 |
3680825 | 3680836 | 11 | 8 | 2 | 10 | 1 | 4 | 5 | 9 | 6 | 0.58 | 0.33 | 0.40 |
3680825 | 3680839 | 14 | 5 | 5 | 10 | 0 | 4 | 4 | 5 | 9 | 0.47 | 0.29 | 0.36 |
3680827 | 3680836 | 9 | 5 | 2 | 7 | 6 | 6 | 12 | 11 | 8 | 0.21 | 0.37 | 0.42 |
3680827 | 3680839 | 12 | 5 | 2 | 7 | 1 | 10 | 11 | 6 | 12 | 0.65 | 0.39 | 0.33 |
3680827 | 3680847 | 20 | 5 | 1 | 6 | 7 | 1 | 8 | 12 | 2 | -0.06 | 0.43 | 0.14 |
3680836 | 3680839 | 3 | 6 | 6 | 12 | 1 | 6 | 7 | 7 | 12 | 0.36 | 0.37 | 0.37 |
3680836 | 3680847 | 11 | 9 | 0 | 9 | 4 | 2 | 6 | 13 | 2 | 0.48 | 0.40 | 0.13 |
3680839 | 3680847 | 8 | 6 | 0 | 6 | 9 | 3 | 12 | 15 | 3 | 0.32 | 0.33 | 0.17 |
3680839 | 3680853 | 14 | 4 | 0 | 4 | 1 | 7 | 8 | 5 | 7 | 0.84 | 0.33 | 0.42 |
3680847 | 3680853 | 6 | 7 | 6 | 13 | 0 | 4 | 4 | 7 | 10 | 0.46 | 0.24 | 0.41 |