r2 Matrix (?)
CpG Pair 1 | CpG Pair 2 | Distance | TT Count | TC Count | T* Count | CT Count | CC Count | C* Count | *T Count | *C Count | R Value | mafA | mafB |
109959353 | 109959355 | 2 | 474 | 70 | 544 | 116 | 280 | 396 | 590 | 350 | 0.59 | 0.42 | 0.37 |
109959353 | 109959360 | 7 | 321 | 70 | 391 | 191 | 81 | 272 | 512 | 151 | 0.14 | 0.41 | 0.23 |
109959353 | 109959392 | 39 | 59 | 24 | 83 | 15 | 45 | 60 | 74 | 69 | 0.46 | 0.42 | 0.48 |
109959353 | 109959432 | 79 | 229 | 46 | 275 | 149 | 82 | 231 | 378 | 128 | 0.21 | 0.46 | 0.25 |
109959353 | 109959462 | 109 | 25 | 7 | 32 | 7 | 13 | 20 | 32 | 20 | 0.43 | 0.38 | 0.38 |
109959355 | 109959360 | 5 | 384 | 75 | 459 | 164 | 89 | 253 | 548 | 164 | 0.21 | 0.36 | 0.23 |
109959355 | 109959392 | 37 | 33 | 8 | 41 | 2 | 32 | 34 | 35 | 40 | 0.74 | 0.45 | 0.47 |
109959355 | 109959432 | 77 | 235 | 51 | 286 | 108 | 69 | 177 | 343 | 120 | 0.23 | 0.38 | 0.26 |
109959355 | 109959462 | 107 | 35 | 15 | 50 | 9 | 16 | 25 | 44 | 31 | 0.33 | 0.33 | 0.41 |
109959360 | 109959392 | 32 | 30 | 24 | 54 | 6 | 9 | 15 | 36 | 33 | 0.13 | 0.22 | 0.48 |
109959360 | 109959432 | 72 | 212 | 72 | 284 | 64 | 21 | 85 | 276 | 93 | -0.01 | 0.23 | 0.25 |
109959360 | 109959462 | 102 | 58 | 37 | 95 | 15 | 7 | 22 | 73 | 44 | -0.06 | 0.19 | 0.38 |
109959360 | 109959476 | 116 | 12 | 12 | 24 | 2 | 1 | 3 | 14 | 13 | -0.10 | 0.11 | 0.48 |
109959392 | 109959432 | 40 | 11 | 0 | 11 | 4 | 6 | 10 | 15 | 6 | 0.66 | 0.48 | 0.29 |
109959392 | 109959462 | 70 | 116 | 32 | 148 | 55 | 41 | 96 | 171 | 73 | 0.23 | 0.39 | 0.30 |
109959392 | 109959476 | 84 | 101 | 41 | 142 | 22 | 76 | 98 | 123 | 117 | 0.48 | 0.41 | 0.49 |
109959392 | 109959482 | 90 | 86 | 13 | 99 | 31 | 39 | 70 | 117 | 52 | 0.45 | 0.41 | 0.31 |
109959392 | 109959502 | 110 | 14 | 2 | 16 | 5 | 7 | 12 | 19 | 9 | 0.49 | 0.43 | 0.32 |
109959392 | 109959505 | 113 | 11 | 3 | 14 | 2 | 5 | 7 | 13 | 8 | 0.48 | 0.33 | 0.38 |
109959432 | 109959462 | 30 | 82 | 34 | 116 | 27 | 23 | 50 | 109 | 57 | 0.16 | 0.30 | 0.34 |
109959432 | 109959476 | 44 | 25 | 15 | 40 | 6 | 13 | 19 | 31 | 28 | 0.29 | 0.32 | 0.47 |
109959432 | 109959482 | 50 | 62 | 17 | 79 | 19 | 22 | 41 | 81 | 39 | 0.33 | 0.34 | 0.33 |
109959432 | 109959502 | 70 | 258 | 51 | 309 | 119 | 43 | 162 | 377 | 94 | 0.12 | 0.34 | 0.20 |
109959432 | 109959505 | 73 | 185 | 129 | 314 | 65 | 96 | 161 | 250 | 225 | 0.18 | 0.34 | 0.47 |
109959432 | 109959511 | 79 | 101 | 197 | 298 | 59 | 99 | 158 | 160 | 296 | -0.03 | 0.35 | 0.35 |
109959432 | 109959519 | 87 | 91 | 157 | 248 | 32 | 98 | 130 | 123 | 255 | 0.12 | 0.34 | 0.33 |
109959462 | 109959476 | 14 | 258 | 204 | 462 | 45 | 156 | 201 | 303 | 360 | 0.31 | 0.30 | 0.46 |
109959462 | 109959482 | 20 | 265 | 81 | 346 | 75 | 80 | 155 | 340 | 161 | 0.28 | 0.31 | 0.32 |
109959462 | 109959502 | 40 | 21 | 7 | 28 | 15 | 1 | 16 | 36 | 8 | -0.23 | 0.36 | 0.18 |
109959462 | 109959505 | 43 | 25 | 21 | 46 | 14 | 8 | 22 | 39 | 29 | -0.09 | 0.32 | 0.43 |
109959462 | 109959511 | 49 | 20 | 44 | 64 | 4 | 22 | 26 | 24 | 66 | 0.16 | 0.29 | 0.27 |
109959462 | 109959519 | 57 | 28 | 51 | 79 | 2 | 31 | 33 | 30 | 82 | 0.30 | 0.29 | 0.27 |
109959462 | 109959553 | 91 | 11 | 52 | 63 | 3 | 31 | 34 | 14 | 83 | 0.12 | 0.35 | 0.14 |
109959462 | 109959568 | 106 | 12 | 28 | 40 | 2 | 19 | 21 | 14 | 47 | 0.23 | 0.34 | 0.23 |
109959476 | 109959482 | 6 | 360 | 28 | 388 | 227 | 210 | 437 | 587 | 238 | 0.45 | 0.47 | 0.29 |
109959476 | 109959502 | 26 | 99 | 15 | 114 | 88 | 44 | 132 | 187 | 59 | 0.24 | 0.46 | 0.24 |
109959476 | 109959505 | 29 | 60 | 41 | 101 | 44 | 64 | 108 | 104 | 105 | 0.19 | 0.48 | 0.50 |
109959476 | 109959511 | 35 | 6 | 17 | 23 | 4 | 23 | 27 | 10 | 40 | 0.14 | 0.46 | 0.20 |
109959476 | 109959519 | 43 | 7 | 4 | 11 | 0 | 17 | 17 | 7 | 21 | 0.72 | 0.39 | 0.25 |
109959476 | 109959553 | 77 | 14 | 31 | 45 | 10 | 83 | 93 | 24 | 114 | 0.25 | 0.33 | 0.17 |
109959476 | 109959568 | 92 | 13 | 17 | 30 | 8 | 59 | 67 | 21 | 76 | 0.35 | 0.31 | 0.22 |
109959482 | 109959502 | 20 | 198 | 49 | 247 | 70 | 31 | 101 | 268 | 80 | 0.12 | 0.29 | 0.23 |
109959482 | 109959505 | 23 | 119 | 98 | 217 | 33 | 58 | 91 | 152 | 156 | 0.17 | 0.30 | 0.49 |
109959482 | 109959511 | 29 | 34 | 60 | 94 | 6 | 45 | 51 | 40 | 105 | 0.26 | 0.35 | 0.28 |
109959482 | 109959519 | 37 | 4 | 5 | 9 | 0 | 8 | 8 | 4 | 13 | 0.52 | 0.47 | 0.24 |
109959482 | 109959553 | 71 | 16 | 74 | 90 | 9 | 40 | 49 | 25 | 114 | -0.01 | 0.35 | 0.18 |
109959482 | 109959568 | 86 | 14 | 52 | 66 | 10 | 27 | 37 | 24 | 79 | -0.07 | 0.36 | 0.23 |
109959502 | 109959505 | 3 | 425 | 241 | 666 | 25 | 154 | 179 | 450 | 395 | 0.41 | 0.21 | 0.47 |
109959502 | 109959511 | 9 | 218 | 324 | 542 | 18 | 118 | 136 | 236 | 442 | 0.23 | 0.20 | 0.35 |
109959502 | 109959519 | 17 | 150 | 267 | 417 | 19 | 87 | 106 | 169 | 354 | 0.15 | 0.20 | 0.32 |
109959502 | 109959553 | 51 | 7 | 19 | 26 | 2 | 9 | 11 | 9 | 28 | 0.09 | 0.30 | 0.24 |
109959502 | 109959568 | 66 | 11 | 16 | 27 | 3 | 8 | 11 | 14 | 24 | 0.13 | 0.29 | 0.37 |
109959505 | 109959511 | 6 | 210 | 181 | 391 | 40 | 294 | 334 | 250 | 475 | 0.44 | 0.46 | 0.34 |
109959505 | 109959519 | 14 | 122 | 191 | 313 | 59 | 197 | 256 | 181 | 388 | 0.17 | 0.45 | 0.32 |
109959505 | 109959553 | 48 | 2 | 9 | 11 | 3 | 15 | 18 | 5 | 24 | 0.02 | 0.38 | 0.17 |
109959505 | 109959568 | 63 | 7 | 7 | 14 | 2 | 14 | 16 | 9 | 21 | 0.41 | 0.47 | 0.30 |
109959511 | 109959519 | 8 | 129 | 89 | 218 | 73 | 327 | 400 | 202 | 416 | 0.42 | 0.35 | 0.33 |
109959511 | 109959553 | 42 | 1 | 2 | 3 | 1 | 7 | 8 | 2 | 9 | 0.24 | 0.27 | 0.18 |
109959511 | 109959568 | 57 | 4 | 1 | 5 | 2 | 7 | 9 | 6 | 8 | 0.56 | 0.36 | 0.43 |
109959519 | 109959553 | 34 | 1 | 6 | 7 | 1 | 6 | 7 | 2 | 12 | 0.00 | 0.50 | 0.14 |
109959553 | 109959568 | 15 | 12 | 11 | 23 | 22 | 103 | 125 | 34 | 114 | 0.30 | 0.16 | 0.23 |