r2 Matrix (?)
CpG Pair 1 | CpG Pair 2 | Distance | TT Count | TC Count | T* Count | CT Count | CC Count | C* Count | *T Count | *C Count | R Value | mafA | mafB |
130054650 | 130054659 | 9 | 7 | 3 | 10 | 0 | 12 | 12 | 7 | 15 | 0.75 | 0.45 | 0.32 |
130054650 | 130054667 | 17 | 5 | 1 | 6 | 0 | 8 | 8 | 5 | 9 | 0.86 | 0.43 | 0.36 |
130054650 | 130054715 | 65 | 3 | 2 | 5 | 8 | 2 | 10 | 11 | 4 | -0.21 | 0.33 | 0.27 |
130054650 | 130054734 | 84 | 3 | 1 | 4 | 4 | 4 | 8 | 7 | 5 | 0.24 | 0.33 | 0.42 |
130054659 | 130054667 | 8 | 7 | 0 | 7 | 0 | 14 | 14 | 7 | 14 | 1.00 | 0.33 | 0.33 |
130054659 | 130054679 | 20 | 4 | 0 | 4 | 0 | 8 | 8 | 4 | 8 | 1.00 | 0.33 | 0.33 |
130054659 | 130054715 | 56 | 2 | 0 | 2 | 7 | 4 | 11 | 9 | 4 | 0.28 | 0.15 | 0.31 |
130054659 | 130054734 | 75 | 4 | 1 | 5 | 4 | 8 | 12 | 8 | 9 | 0.43 | 0.29 | 0.47 |
130054659 | 130054741 | 82 | 3 | 0 | 3 | 3 | 5 | 8 | 6 | 5 | 0.56 | 0.27 | 0.45 |
130054667 | 130054679 | 12 | 8 | 0 | 8 | 0 | 11 | 11 | 8 | 11 | 1.00 | 0.42 | 0.42 |
130054667 | 130054691 | 24 | 5 | 0 | 5 | 0 | 8 | 8 | 5 | 8 | 1.00 | 0.38 | 0.38 |
130054667 | 130054715 | 48 | 2 | 0 | 2 | 6 | 3 | 9 | 8 | 3 | 0.29 | 0.18 | 0.27 |
130054667 | 130054734 | 67 | 4 | 0 | 4 | 4 | 8 | 12 | 8 | 8 | 0.58 | 0.25 | 0.50 |
130054667 | 130054741 | 74 | 3 | 0 | 3 | 2 | 9 | 11 | 5 | 9 | 0.70 | 0.21 | 0.36 |
130054679 | 130054691 | 12 | 11 | 1 | 12 | 3 | 23 | 26 | 14 | 24 | 0.77 | 0.32 | 0.37 |
130054679 | 130054734 | 55 | 4 | 0 | 4 | 1 | 6 | 7 | 5 | 6 | 0.83 | 0.36 | 0.45 |
130054679 | 130054741 | 62 | 3 | 0 | 3 | 1 | 9 | 10 | 4 | 9 | 0.82 | 0.23 | 0.31 |
130054679 | 130054748 | 69 | 3 | 0 | 3 | 2 | 9 | 11 | 5 | 9 | 0.70 | 0.21 | 0.36 |
130054679 | 130054775 | 96 | 4 | 1 | 5 | 4 | 10 | 14 | 8 | 11 | 0.46 | 0.26 | 0.42 |
130054691 | 130054715 | 24 | 9 | 0 | 9 | 5 | 5 | 10 | 14 | 5 | 0.57 | 0.47 | 0.26 |
130054691 | 130054741 | 50 | 2 | 0 | 2 | 0 | 9 | 9 | 2 | 9 | 1.00 | 0.18 | 0.18 |
130054691 | 130054748 | 57 | 2 | 0 | 2 | 2 | 12 | 14 | 4 | 12 | 0.66 | 0.12 | 0.25 |
130054691 | 130054775 | 84 | 7 | 3 | 10 | 6 | 11 | 17 | 13 | 14 | 0.34 | 0.37 | 0.48 |
130054715 | 130054734 | 19 | 22 | 26 | 48 | 4 | 2 | 6 | 26 | 28 | -0.13 | 0.11 | 0.48 |
130054715 | 130054748 | 33 | 4 | 10 | 14 | 1 | 2 | 3 | 5 | 12 | -0.04 | 0.18 | 0.29 |
130054715 | 130054775 | 60 | 12 | 10 | 22 | 2 | 1 | 3 | 14 | 11 | -0.08 | 0.12 | 0.44 |
130054715 | 130054793 | 78 | 3 | 14 | 17 | 0 | 2 | 2 | 3 | 16 | 0.15 | 0.11 | 0.16 |
130054715 | 130054808 | 93 | 5 | 14 | 19 | 0 | 3 | 3 | 5 | 17 | 0.21 | 0.14 | 0.23 |
130054715 | 130054811 | 96 | 9 | 8 | 17 | 2 | 1 | 3 | 11 | 9 | -0.10 | 0.15 | 0.45 |
130054734 | 130054741 | 7 | 28 | 7 | 35 | 6 | 38 | 44 | 34 | 45 | 0.67 | 0.44 | 0.43 |
130054734 | 130054748 | 14 | 19 | 2 | 21 | 6 | 23 | 29 | 25 | 25 | 0.69 | 0.42 | 0.50 |
130054734 | 130054775 | 41 | 4 | 0 | 4 | 2 | 6 | 8 | 6 | 6 | 0.71 | 0.33 | 0.50 |
130054734 | 130054793 | 59 | 2 | 8 | 10 | 0 | 6 | 6 | 2 | 14 | 0.29 | 0.38 | 0.12 |
130054734 | 130054808 | 74 | 6 | 14 | 20 | 0 | 8 | 8 | 6 | 22 | 0.33 | 0.29 | 0.21 |
130054734 | 130054811 | 77 | 9 | 11 | 20 | 8 | 0 | 8 | 17 | 11 | -0.51 | 0.29 | 0.39 |
130054734 | 130054823 | 89 | 3 | 12 | 15 | 0 | 7 | 7 | 3 | 19 | 0.27 | 0.32 | 0.14 |
130054734 | 130054828 | 94 | 7 | 7 | 14 | 2 | 1 | 3 | 9 | 8 | -0.13 | 0.18 | 0.47 |
130054741 | 130054748 | 7 | 22 | 3 | 25 | 7 | 38 | 45 | 29 | 41 | 0.70 | 0.36 | 0.41 |
130054741 | 130054775 | 34 | 5 | 0 | 5 | 3 | 9 | 12 | 8 | 9 | 0.69 | 0.29 | 0.47 |
130054741 | 130054808 | 67 | 5 | 7 | 12 | 0 | 15 | 15 | 5 | 22 | 0.53 | 0.44 | 0.19 |
130054741 | 130054811 | 70 | 5 | 7 | 12 | 12 | 4 | 16 | 17 | 11 | -0.34 | 0.43 | 0.39 |
130054741 | 130054823 | 82 | 3 | 9 | 12 | 0 | 13 | 13 | 3 | 22 | 0.38 | 0.48 | 0.12 |
130054741 | 130054828 | 87 | 5 | 6 | 11 | 4 | 6 | 10 | 9 | 12 | 0.06 | 0.48 | 0.43 |
130054748 | 130054775 | 27 | 15 | 2 | 17 | 5 | 18 | 23 | 20 | 20 | 0.66 | 0.42 | 0.50 |
130054748 | 130054808 | 60 | 4 | 6 | 10 | 0 | 12 | 12 | 4 | 18 | 0.52 | 0.45 | 0.18 |
130054748 | 130054811 | 63 | 3 | 7 | 10 | 11 | 2 | 13 | 14 | 9 | -0.56 | 0.43 | 0.39 |
130054748 | 130054823 | 75 | 3 | 12 | 15 | 0 | 11 | 11 | 3 | 23 | 0.31 | 0.42 | 0.12 |
130054748 | 130054828 | 80 | 6 | 9 | 15 | 2 | 7 | 9 | 8 | 16 | 0.18 | 0.38 | 0.33 |
130054775 | 130054793 | 18 | 4 | 12 | 16 | 0 | 12 | 12 | 4 | 24 | 0.35 | 0.43 | 0.14 |
130054775 | 130054828 | 53 | 1 | 7 | 8 | 4 | 5 | 9 | 5 | 12 | -0.35 | 0.47 | 0.29 |
130054793 | 130054808 | 15 | 7 | 6 | 13 | 5 | 47 | 52 | 12 | 53 | 0.46 | 0.20 | 0.18 |
130054793 | 130054811 | 18 | 12 | 1 | 13 | 29 | 18 | 47 | 41 | 19 | 0.27 | 0.22 | 0.32 |
130054793 | 130054823 | 30 | 4 | 4 | 8 | 1 | 27 | 28 | 5 | 31 | 0.56 | 0.22 | 0.14 |
130054793 | 130054828 | 35 | 3 | 0 | 3 | 6 | 3 | 9 | 9 | 3 | 0.33 | 0.25 | 0.25 |
130054793 | 130054879 | 86 | 4 | 4 | 8 | 3 | 16 | 19 | 7 | 20 | 0.36 | 0.30 | 0.26 |
130054793 | 130054881 | 88 | 3 | 4 | 7 | 3 | 16 | 19 | 6 | 20 | 0.28 | 0.27 | 0.23 |
130054793 | 130054894 | 101 | 2 | 2 | 4 | 1 | 13 | 14 | 3 | 15 | 0.48 | 0.22 | 0.17 |
130054808 | 130054811 | 3 | 25 | 2 | 27 | 115 | 33 | 148 | 140 | 35 | 0.13 | 0.15 | 0.20 |
130054808 | 130054823 | 15 | 13 | 8 | 21 | 2 | 125 | 127 | 15 | 133 | 0.70 | 0.14 | 0.10 |
130054808 | 130054828 | 20 | 13 | 3 | 16 | 49 | 56 | 105 | 62 | 59 | 0.23 | 0.13 | 0.49 |
130054808 | 130054879 | 71 | 9 | 4 | 13 | 17 | 69 | 86 | 26 | 73 | 0.38 | 0.13 | 0.26 |
130054808 | 130054881 | 73 | 7 | 5 | 12 | 18 | 70 | 88 | 25 | 75 | 0.28 | 0.12 | 0.25 |
130054808 | 130054894 | 86 | 5 | 6 | 11 | 10 | 74 | 84 | 15 | 80 | 0.29 | 0.12 | 0.16 |
130054808 | 130054910 | 102 | 2 | 1 | 3 | 7 | 18 | 25 | 9 | 19 | 0.26 | 0.11 | 0.32 |
130054811 | 130054823 | 12 | 21 | 126 | 147 | 0 | 25 | 25 | 21 | 151 | 0.15 | 0.15 | 0.12 |
130054811 | 130054828 | 17 | 70 | 55 | 125 | 4 | 16 | 20 | 74 | 71 | 0.25 | 0.14 | 0.49 |
130054811 | 130054894 | 83 | 19 | 83 | 102 | 1 | 11 | 12 | 20 | 94 | 0.08 | 0.11 | 0.18 |
130054811 | 130054910 | 99 | 13 | 16 | 29 | 1 | 6 | 7 | 14 | 22 | 0.25 | 0.19 | 0.39 |
130054823 | 130054828 | 5 | 23 | 3 | 26 | 106 | 120 | 226 | 129 | 123 | 0.25 | 0.10 | 0.49 |
130054823 | 130054879 | 56 | 12 | 7 | 19 | 25 | 114 | 139 | 37 | 121 | 0.35 | 0.12 | 0.23 |
130054823 | 130054881 | 58 | 10 | 8 | 18 | 29 | 121 | 150 | 39 | 129 | 0.27 | 0.11 | 0.23 |
130054828 | 130054879 | 51 | 30 | 54 | 84 | 5 | 63 | 68 | 35 | 117 | 0.34 | 0.45 | 0.23 |
130054828 | 130054881 | 53 | 35 | 56 | 91 | 5 | 68 | 73 | 40 | 124 | 0.37 | 0.45 | 0.24 |
130054828 | 130054894 | 66 | 14 | 89 | 103 | 9 | 91 | 100 | 23 | 180 | 0.07 | 0.49 | 0.11 |
130054828 | 130054910 | 82 | 29 | 19 | 48 | 24 | 29 | 53 | 53 | 48 | 0.15 | 0.48 | 0.48 |
130054828 | 130054927 | 99 | 3 | 13 | 16 | 0 | 13 | 13 | 3 | 26 | 0.31 | 0.45 | 0.10 |
130054879 | 130054881 | 2 | 61 | 5 | 66 | 10 | 252 | 262 | 71 | 257 | 0.86 | 0.20 | 0.22 |
130054879 | 130054894 | 15 | 20 | 35 | 55 | 21 | 188 | 209 | 41 | 223 | 0.29 | 0.21 | 0.16 |
130054879 | 130054910 | 31 | 10 | 6 | 16 | 23 | 24 | 47 | 33 | 30 | 0.12 | 0.25 | 0.48 |
130054879 | 130054927 | 48 | 1 | 5 | 6 | 6 | 30 | 36 | 7 | 35 | 0.00 | 0.14 | 0.17 |
130054881 | 130054894 | 13 | 19 | 45 | 64 | 24 | 200 | 224 | 43 | 245 | 0.22 | 0.22 | 0.15 |
130054881 | 130054910 | 29 | 13 | 9 | 22 | 34 | 29 | 63 | 47 | 38 | 0.04 | 0.26 | 0.45 |
130054881 | 130054927 | 46 | 2 | 5 | 7 | 4 | 30 | 34 | 6 | 35 | 0.18 | 0.17 | 0.15 |
130054894 | 130054910 | 16 | 22 | 3 | 25 | 82 | 74 | 156 | 104 | 77 | 0.25 | 0.14 | 0.43 |
130054905 | 130054910 | 5 | 20 | 6 | 26 | 110 | 81 | 191 | 130 | 87 | 0.13 | 0.12 | 0.40 |
130054905 | 130054927 | 22 | 11 | 4 | 15 | 1 | 74 | 75 | 12 | 78 | 0.79 | 0.17 | 0.13 |
130054910 | 130054927 | 17 | 14 | 65 | 79 | 5 | 47 | 52 | 19 | 112 | 0.11 | 0.40 | 0.15 |