r2 Matrix (?)
CpG Pair 1 | CpG Pair 2 | Distance | TT Count | TC Count | T* Count | CT Count | CC Count | C* Count | *T Count | *C Count | R Value | mafA | mafB |
130859528 | 130859535 | 7 | 78 | 0 | 78 | 3 | 67 | 70 | 81 | 67 | 0.96 | 0.47 | 0.45 |
130859528 | 130859537 | 9 | 77 | 0 | 77 | 6 | 61 | 67 | 83 | 61 | 0.92 | 0.47 | 0.42 |
130859528 | 130859544 | 16 | 69 | 1 | 70 | 2 | 54 | 56 | 71 | 55 | 0.95 | 0.44 | 0.44 |
130859528 | 130859556 | 28 | 38 | 1 | 39 | 2 | 26 | 28 | 40 | 27 | 0.91 | 0.42 | 0.40 |
130859528 | 130859559 | 31 | 35 | 1 | 36 | 5 | 20 | 25 | 40 | 21 | 0.80 | 0.41 | 0.34 |
130859528 | 130859588 | 60 | 25 | 1 | 26 | 1 | 14 | 15 | 26 | 15 | 0.90 | 0.37 | 0.37 |
130859528 | 130859593 | 65 | 33 | 1 | 34 | 2 | 19 | 21 | 35 | 20 | 0.88 | 0.38 | 0.36 |
130859528 | 130859609 | 81 | 47 | 1 | 48 | 5 | 27 | 32 | 52 | 28 | 0.84 | 0.40 | 0.35 |
130859528 | 130859645 | 117 | 5 | 0 | 5 | 2 | 4 | 6 | 7 | 4 | 0.69 | 0.45 | 0.36 |
130859535 | 130859537 | 2 | 106 | 0 | 106 | 5 | 87 | 92 | 111 | 87 | 0.95 | 0.46 | 0.44 |
130859535 | 130859544 | 9 | 96 | 1 | 97 | 3 | 80 | 83 | 99 | 81 | 0.95 | 0.46 | 0.45 |
130859535 | 130859556 | 21 | 64 | 1 | 65 | 5 | 51 | 56 | 69 | 52 | 0.90 | 0.46 | 0.43 |
130859535 | 130859559 | 24 | 61 | 1 | 62 | 6 | 47 | 53 | 67 | 48 | 0.88 | 0.46 | 0.42 |
130859535 | 130859567 | 32 | 16 | 0 | 16 | 9 | 13 | 22 | 25 | 13 | 0.61 | 0.42 | 0.34 |
130859535 | 130859588 | 53 | 27 | 1 | 28 | 0 | 17 | 17 | 27 | 18 | 0.95 | 0.38 | 0.40 |
130859535 | 130859593 | 58 | 36 | 1 | 37 | 1 | 24 | 25 | 37 | 25 | 0.93 | 0.40 | 0.40 |
130859535 | 130859609 | 74 | 63 | 1 | 64 | 7 | 35 | 42 | 70 | 36 | 0.84 | 0.40 | 0.34 |
130859535 | 130859645 | 110 | 12 | 0 | 12 | 5 | 11 | 16 | 17 | 11 | 0.70 | 0.43 | 0.39 |
130859535 | 130859655 | 120 | 5 | 0 | 5 | 0 | 9 | 9 | 5 | 9 | 1.00 | 0.36 | 0.36 |
130859537 | 130859544 | 7 | 104 | 6 | 110 | 2 | 84 | 86 | 106 | 90 | 0.92 | 0.44 | 0.46 |
130859537 | 130859556 | 19 | 72 | 5 | 77 | 5 | 55 | 60 | 77 | 60 | 0.85 | 0.44 | 0.44 |
130859537 | 130859559 | 22 | 71 | 3 | 74 | 5 | 52 | 57 | 76 | 55 | 0.88 | 0.44 | 0.42 |
130859537 | 130859567 | 30 | 24 | 0 | 24 | 11 | 19 | 30 | 35 | 19 | 0.66 | 0.44 | 0.35 |
130859537 | 130859588 | 51 | 26 | 2 | 28 | 0 | 15 | 15 | 26 | 17 | 0.91 | 0.35 | 0.40 |
130859537 | 130859593 | 56 | 35 | 2 | 37 | 1 | 22 | 23 | 36 | 24 | 0.90 | 0.38 | 0.40 |
130859537 | 130859609 | 72 | 66 | 2 | 68 | 5 | 35 | 40 | 71 | 37 | 0.86 | 0.37 | 0.34 |
130859537 | 130859645 | 108 | 15 | 0 | 15 | 5 | 15 | 20 | 20 | 15 | 0.75 | 0.43 | 0.43 |
130859537 | 130859655 | 118 | 5 | 0 | 5 | 0 | 12 | 12 | 5 | 12 | 1.00 | 0.29 | 0.29 |
130859544 | 130859556 | 12 | 85 | 3 | 88 | 8 | 67 | 75 | 93 | 70 | 0.86 | 0.46 | 0.43 |
130859544 | 130859559 | 15 | 83 | 2 | 85 | 7 | 64 | 71 | 90 | 66 | 0.89 | 0.46 | 0.42 |
130859544 | 130859567 | 23 | 35 | 1 | 36 | 17 | 24 | 41 | 52 | 25 | 0.59 | 0.47 | 0.32 |
130859544 | 130859588 | 44 | 21 | 0 | 21 | 0 | 14 | 14 | 21 | 14 | 1.00 | 0.40 | 0.40 |
130859544 | 130859593 | 49 | 29 | 0 | 29 | 1 | 21 | 22 | 30 | 21 | 0.96 | 0.43 | 0.41 |
130859544 | 130859609 | 65 | 64 | 1 | 65 | 7 | 37 | 44 | 71 | 38 | 0.85 | 0.40 | 0.35 |
130859544 | 130859645 | 101 | 20 | 1 | 21 | 6 | 20 | 26 | 26 | 21 | 0.72 | 0.45 | 0.45 |
130859544 | 130859655 | 111 | 6 | 1 | 7 | 0 | 16 | 16 | 6 | 17 | 0.90 | 0.30 | 0.26 |
130859556 | 130859559 | 3 | 105 | 15 | 120 | 10 | 97 | 107 | 115 | 112 | 0.78 | 0.47 | 0.49 |
130859556 | 130859567 | 11 | 57 | 11 | 68 | 30 | 49 | 79 | 87 | 60 | 0.47 | 0.46 | 0.41 |
130859556 | 130859588 | 32 | 13 | 1 | 14 | 3 | 24 | 27 | 16 | 25 | 0.80 | 0.34 | 0.39 |
130859556 | 130859593 | 37 | 13 | 0 | 13 | 0 | 13 | 13 | 13 | 13 | 1.00 | 0.50 | 0.50 |
130859556 | 130859609 | 53 | 43 | 4 | 47 | 5 | 25 | 30 | 48 | 29 | 0.75 | 0.39 | 0.38 |
130859556 | 130859645 | 89 | 30 | 9 | 39 | 7 | 36 | 43 | 37 | 45 | 0.61 | 0.48 | 0.45 |
130859556 | 130859655 | 99 | 14 | 8 | 22 | 0 | 35 | 35 | 14 | 43 | 0.72 | 0.39 | 0.25 |
130859556 | 130859665 | 109 | 5 | 2 | 7 | 1 | 12 | 13 | 6 | 14 | 0.66 | 0.35 | 0.30 |
130859556 | 130859669 | 113 | 3 | 1 | 4 | 0 | 13 | 13 | 3 | 14 | 0.83 | 0.24 | 0.18 |
130859559 | 130859567 | 8 | 69 | 1 | 70 | 30 | 67 | 97 | 99 | 68 | 0.68 | 0.42 | 0.41 |
130859559 | 130859588 | 29 | 21 | 5 | 26 | 2 | 33 | 35 | 23 | 38 | 0.77 | 0.43 | 0.38 |
130859559 | 130859593 | 34 | 17 | 2 | 19 | 2 | 19 | 21 | 19 | 21 | 0.80 | 0.47 | 0.47 |
130859559 | 130859609 | 50 | 43 | 4 | 47 | 3 | 25 | 28 | 46 | 29 | 0.80 | 0.37 | 0.39 |
130859559 | 130859645 | 86 | 31 | 3 | 34 | 7 | 47 | 54 | 38 | 50 | 0.77 | 0.39 | 0.43 |
130859559 | 130859655 | 96 | 17 | 4 | 21 | 0 | 44 | 44 | 17 | 48 | 0.86 | 0.32 | 0.26 |
130859559 | 130859665 | 106 | 8 | 2 | 10 | 1 | 16 | 17 | 9 | 18 | 0.76 | 0.37 | 0.33 |
130859559 | 130859669 | 110 | 6 | 2 | 8 | 0 | 16 | 16 | 6 | 18 | 0.82 | 0.33 | 0.25 |
130859567 | 130859588 | 21 | 46 | 21 | 67 | 1 | 30 | 31 | 47 | 51 | 0.61 | 0.32 | 0.48 |
130859567 | 130859593 | 26 | 32 | 17 | 49 | 1 | 18 | 19 | 33 | 35 | 0.54 | 0.28 | 0.49 |
130859567 | 130859609 | 42 | 17 | 8 | 25 | 0 | 6 | 6 | 17 | 14 | 0.54 | 0.19 | 0.45 |
130859567 | 130859645 | 78 | 31 | 17 | 48 | 6 | 37 | 43 | 37 | 54 | 0.52 | 0.47 | 0.41 |
130859567 | 130859655 | 88 | 23 | 19 | 42 | 0 | 38 | 38 | 23 | 57 | 0.60 | 0.47 | 0.29 |
130859567 | 130859665 | 98 | 15 | 15 | 30 | 1 | 17 | 18 | 16 | 32 | 0.46 | 0.38 | 0.33 |
130859567 | 130859669 | 102 | 12 | 14 | 26 | 0 | 17 | 17 | 12 | 31 | 0.50 | 0.40 | 0.28 |
130859588 | 130859593 | 5 | 124 | 10 | 134 | 4 | 85 | 89 | 128 | 95 | 0.87 | 0.40 | 0.43 |
130859588 | 130859609 | 21 | 71 | 2 | 73 | 11 | 39 | 50 | 82 | 41 | 0.78 | 0.41 | 0.33 |
130859588 | 130859645 | 57 | 23 | 5 | 28 | 4 | 24 | 28 | 27 | 29 | 0.68 | 0.50 | 0.48 |
130859588 | 130859655 | 67 | 35 | 8 | 43 | 1 | 38 | 39 | 36 | 46 | 0.79 | 0.48 | 0.44 |
130859588 | 130859665 | 77 | 40 | 7 | 47 | 2 | 38 | 40 | 42 | 45 | 0.80 | 0.46 | 0.48 |
130859588 | 130859669 | 81 | 40 | 6 | 46 | 0 | 40 | 40 | 40 | 46 | 0.87 | 0.47 | 0.47 |
130859593 | 130859609 | 16 | 97 | 3 | 100 | 17 | 57 | 74 | 114 | 60 | 0.77 | 0.43 | 0.34 |
130859593 | 130859645 | 52 | 20 | 1 | 21 | 5 | 21 | 26 | 25 | 22 | 0.76 | 0.45 | 0.47 |
130859593 | 130859655 | 62 | 39 | 3 | 42 | 2 | 35 | 37 | 41 | 38 | 0.87 | 0.47 | 0.48 |
130859593 | 130859665 | 72 | 48 | 3 | 51 | 3 | 43 | 46 | 51 | 46 | 0.88 | 0.47 | 0.47 |
130859593 | 130859669 | 76 | 49 | 3 | 52 | 0 | 45 | 45 | 49 | 48 | 0.94 | 0.46 | 0.49 |
130859593 | 130859702 | 109 | 7 | 0 | 7 | 1 | 4 | 5 | 8 | 4 | 0.84 | 0.42 | 0.33 |
130859609 | 130859645 | 36 | 12 | 2 | 14 | 2 | 3 | 5 | 14 | 5 | 0.46 | 0.26 | 0.26 |
130859609 | 130859655 | 46 | 32 | 4 | 36 | 1 | 14 | 15 | 33 | 18 | 0.78 | 0.29 | 0.35 |
130859609 | 130859665 | 56 | 55 | 7 | 62 | 1 | 29 | 30 | 56 | 36 | 0.82 | 0.33 | 0.39 |
130859609 | 130859669 | 60 | 65 | 9 | 74 | 0 | 32 | 32 | 65 | 41 | 0.83 | 0.30 | 0.39 |
130859609 | 130859702 | 93 | 46 | 4 | 50 | 8 | 46 | 54 | 54 | 50 | 0.77 | 0.48 | 0.48 |
130859609 | 130859706 | 97 | 34 | 4 | 38 | 7 | 44 | 51 | 41 | 48 | 0.75 | 0.43 | 0.46 |
130859645 | 130859655 | 10 | 234 | 20 | 254 | 4 | 203 | 207 | 238 | 223 | 0.90 | 0.45 | 0.48 |
130859645 | 130859665 | 20 | 145 | 10 | 155 | 5 | 115 | 120 | 150 | 125 | 0.89 | 0.44 | 0.45 |
130859645 | 130859669 | 24 | 107 | 9 | 116 | 2 | 102 | 104 | 109 | 111 | 0.90 | 0.47 | 0.50 |
130859645 | 130859702 | 57 | 137 | 12 | 149 | 18 | 66 | 84 | 155 | 78 | 0.72 | 0.36 | 0.33 |
130859645 | 130859706 | 61 | 136 | 20 | 156 | 15 | 85 | 100 | 151 | 105 | 0.72 | 0.39 | 0.41 |
130859645 | 130859735 | 90 | 77 | 6 | 83 | 12 | 70 | 82 | 89 | 76 | 0.78 | 0.50 | 0.46 |
130859645 | 130859737 | 92 | 59 | 4 | 63 | 6 | 59 | 65 | 65 | 63 | 0.84 | 0.49 | 0.49 |
130859645 | 130859740 | 95 | 54 | 2 | 56 | 6 | 50 | 56 | 60 | 52 | 0.86 | 0.50 | 0.46 |
130859645 | 130859743 | 98 | 45 | 1 | 46 | 7 | 30 | 37 | 52 | 31 | 0.81 | 0.45 | 0.37 |
130859655 | 130859665 | 10 | 213 | 3 | 216 | 6 | 173 | 179 | 219 | 176 | 0.95 | 0.45 | 0.45 |
130859655 | 130859669 | 14 | 174 | 2 | 176 | 2 | 160 | 162 | 176 | 162 | 0.98 | 0.48 | 0.48 |
130859655 | 130859702 | 47 | 103 | 0 | 103 | 8 | 57 | 65 | 111 | 57 | 0.90 | 0.39 | 0.34 |
130859655 | 130859706 | 51 | 107 | 3 | 110 | 6 | 78 | 84 | 113 | 81 | 0.91 | 0.43 | 0.42 |
130859655 | 130859735 | 80 | 96 | 3 | 99 | 13 | 84 | 97 | 109 | 87 | 0.84 | 0.49 | 0.44 |
130859655 | 130859737 | 82 | 79 | 1 | 80 | 9 | 76 | 85 | 88 | 77 | 0.88 | 0.48 | 0.47 |
130859655 | 130859740 | 85 | 74 | 2 | 76 | 11 | 63 | 74 | 85 | 65 | 0.83 | 0.49 | 0.43 |
130859655 | 130859743 | 88 | 64 | 1 | 65 | 10 | 42 | 52 | 74 | 43 | 0.82 | 0.44 | 0.37 |
130859665 | 130859669 | 4 | 236 | 8 | 244 | 4 | 202 | 206 | 240 | 210 | 0.95 | 0.46 | 0.47 |
130859665 | 130859702 | 37 | 50 | 2 | 52 | 5 | 23 | 28 | 55 | 25 | 0.81 | 0.35 | 0.31 |
130859665 | 130859706 | 41 | 58 | 3 | 61 | 4 | 38 | 42 | 62 | 41 | 0.86 | 0.41 | 0.40 |
130859665 | 130859735 | 70 | 91 | 4 | 95 | 9 | 69 | 78 | 100 | 73 | 0.85 | 0.45 | 0.42 |
130859665 | 130859737 | 72 | 79 | 2 | 81 | 8 | 64 | 72 | 87 | 66 | 0.87 | 0.47 | 0.43 |
130859665 | 130859740 | 75 | 74 | 2 | 76 | 11 | 56 | 67 | 85 | 58 | 0.82 | 0.47 | 0.41 |
130859665 | 130859743 | 78 | 65 | 1 | 66 | 9 | 39 | 48 | 74 | 40 | 0.82 | 0.42 | 0.35 |
130859669 | 130859702 | 33 | 51 | 0 | 51 | 4 | 31 | 35 | 55 | 31 | 0.91 | 0.41 | 0.36 |
130859669 | 130859706 | 37 | 42 | 1 | 43 | 2 | 29 | 31 | 44 | 30 | 0.92 | 0.42 | 0.41 |
130859669 | 130859735 | 66 | 77 | 3 | 80 | 7 | 64 | 71 | 84 | 67 | 0.87 | 0.47 | 0.44 |
130859669 | 130859737 | 68 | 68 | 2 | 70 | 7 | 61 | 68 | 75 | 63 | 0.87 | 0.49 | 0.46 |
130859669 | 130859740 | 71 | 65 | 2 | 67 | 9 | 55 | 64 | 74 | 57 | 0.84 | 0.49 | 0.44 |
130859669 | 130859743 | 74 | 58 | 1 | 59 | 8 | 39 | 47 | 66 | 40 | 0.83 | 0.44 | 0.38 |
130859702 | 130859706 | 4 | 261 | 32 | 293 | 14 | 155 | 169 | 275 | 187 | 0.79 | 0.37 | 0.40 |
130859702 | 130859735 | 33 | 39 | 4 | 43 | 4 | 17 | 21 | 43 | 21 | 0.72 | 0.33 | 0.33 |
130859702 | 130859737 | 35 | 5 | 1 | 6 | 0 | 5 | 5 | 5 | 6 | 0.83 | 0.45 | 0.45 |
130859706 | 130859735 | 29 | 50 | 3 | 53 | 7 | 40 | 47 | 57 | 43 | 0.80 | 0.47 | 0.43 |
130859706 | 130859737 | 31 | 16 | 1 | 17 | 0 | 30 | 30 | 16 | 31 | 0.95 | 0.36 | 0.34 |
130859706 | 130859740 | 34 | 10 | 1 | 11 | 2 | 13 | 15 | 12 | 14 | 0.77 | 0.42 | 0.46 |
130859735 | 130859737 | 2 | 118 | 11 | 129 | 7 | 102 | 109 | 125 | 113 | 0.85 | 0.46 | 0.47 |
130859735 | 130859740 | 5 | 113 | 10 | 123 | 7 | 87 | 94 | 120 | 97 | 0.84 | 0.43 | 0.45 |
130859735 | 130859743 | 8 | 98 | 5 | 103 | 9 | 63 | 72 | 107 | 68 | 0.83 | 0.41 | 0.39 |
130859737 | 130859740 | 3 | 112 | 7 | 119 | 8 | 90 | 98 | 120 | 97 | 0.86 | 0.45 | 0.45 |
130859737 | 130859743 | 6 | 97 | 5 | 102 | 10 | 63 | 73 | 107 | 68 | 0.82 | 0.42 | 0.39 |
130859740 | 130859743 | 3 | 97 | 5 | 102 | 11 | 63 | 74 | 108 | 68 | 0.81 | 0.42 | 0.39 |