r2 Matrix (?)
CpG Pair 1 | CpG Pair 2 | Distance | TT Count | TC Count | T* Count | CT Count | CC Count | C* Count | *T Count | *C Count | R Value | mafA | mafB |
1642620 | 1642640 | 20 | 51 | 0 | 51 | 5 | 82 | 87 | 56 | 82 | 0.93 | 0.37 | 0.41 |
1642620 | 1642653 | 33 | 6 | 0 | 6 | 0 | 14 | 14 | 6 | 14 | 1.00 | 0.30 | 0.30 |
1642620 | 1642673 | 53 | 6 | 1 | 7 | 0 | 11 | 11 | 6 | 12 | 0.89 | 0.39 | 0.33 |
1642620 | 1642683 | 63 | 20 | 1 | 21 | 1 | 29 | 30 | 21 | 30 | 0.92 | 0.41 | 0.41 |
1642620 | 1642698 | 78 | 33 | 2 | 35 | 3 | 43 | 46 | 36 | 45 | 0.88 | 0.43 | 0.44 |
1642620 | 1642703 | 83 | 34 | 1 | 35 | 4 | 49 | 53 | 38 | 50 | 0.89 | 0.40 | 0.43 |
1642620 | 1642728 | 108 | 10 | 0 | 10 | 0 | 32 | 32 | 10 | 32 | 1.00 | 0.24 | 0.24 |
1642640 | 1642653 | 13 | 44 | 4 | 48 | 3 | 82 | 85 | 47 | 86 | 0.89 | 0.36 | 0.35 |
1642640 | 1642660 | 20 | 25 | 7 | 32 | 4 | 51 | 55 | 29 | 58 | 0.72 | 0.37 | 0.33 |
1642640 | 1642673 | 33 | 6 | 2 | 8 | 1 | 19 | 20 | 7 | 21 | 0.73 | 0.29 | 0.25 |
1642640 | 1642683 | 43 | 14 | 1 | 15 | 1 | 18 | 19 | 15 | 19 | 0.88 | 0.44 | 0.44 |
1642640 | 1642698 | 58 | 26 | 3 | 29 | 2 | 39 | 41 | 28 | 42 | 0.85 | 0.41 | 0.40 |
1642640 | 1642703 | 63 | 33 | 2 | 35 | 4 | 49 | 53 | 37 | 51 | 0.86 | 0.40 | 0.42 |
1642640 | 1642728 | 88 | 19 | 3 | 22 | 1 | 62 | 63 | 20 | 65 | 0.88 | 0.26 | 0.24 |
1642640 | 1642740 | 100 | 10 | 1 | 11 | 2 | 32 | 34 | 12 | 33 | 0.83 | 0.24 | 0.27 |
1642653 | 1642660 | 7 | 98 | 4 | 102 | 4 | 143 | 147 | 102 | 147 | 0.93 | 0.41 | 0.41 |
1642653 | 1642673 | 20 | 74 | 1 | 75 | 4 | 107 | 111 | 78 | 108 | 0.94 | 0.40 | 0.42 |
1642653 | 1642683 | 30 | 16 | 0 | 16 | 0 | 34 | 34 | 16 | 34 | 1.00 | 0.32 | 0.32 |
1642653 | 1642698 | 45 | 3 | 0 | 3 | 1 | 14 | 15 | 4 | 14 | 0.84 | 0.17 | 0.22 |
1642653 | 1642703 | 50 | 9 | 0 | 9 | 2 | 21 | 23 | 11 | 21 | 0.86 | 0.28 | 0.34 |
1642653 | 1642728 | 75 | 19 | 1 | 20 | 5 | 68 | 73 | 24 | 69 | 0.83 | 0.22 | 0.26 |
1642653 | 1642740 | 87 | 18 | 0 | 18 | 5 | 59 | 64 | 23 | 59 | 0.85 | 0.22 | 0.28 |
1642660 | 1642673 | 13 | 90 | 4 | 94 | 7 | 151 | 158 | 97 | 155 | 0.91 | 0.37 | 0.38 |
1642660 | 1642683 | 23 | 32 | 1 | 33 | 3 | 79 | 82 | 35 | 80 | 0.92 | 0.29 | 0.30 |
1642660 | 1642703 | 43 | 4 | 0 | 4 | 2 | 11 | 13 | 6 | 11 | 0.75 | 0.24 | 0.35 |
1642660 | 1642728 | 68 | 17 | 1 | 18 | 3 | 63 | 66 | 20 | 64 | 0.87 | 0.21 | 0.24 |
1642660 | 1642740 | 80 | 25 | 0 | 25 | 7 | 67 | 74 | 32 | 67 | 0.84 | 0.25 | 0.32 |
1642673 | 1642683 | 10 | 63 | 2 | 65 | 1 | 131 | 132 | 64 | 133 | 0.96 | 0.33 | 0.32 |
1642673 | 1642698 | 25 | 25 | 1 | 26 | 1 | 46 | 47 | 26 | 47 | 0.94 | 0.36 | 0.36 |
1642673 | 1642703 | 30 | 16 | 1 | 17 | 4 | 28 | 32 | 20 | 29 | 0.79 | 0.35 | 0.41 |
1642673 | 1642728 | 55 | 13 | 1 | 14 | 3 | 46 | 49 | 16 | 47 | 0.83 | 0.22 | 0.25 |
1642673 | 1642740 | 67 | 24 | 2 | 26 | 6 | 61 | 67 | 30 | 63 | 0.80 | 0.28 | 0.32 |
1642683 | 1642698 | 15 | 66 | 1 | 67 | 5 | 96 | 101 | 71 | 97 | 0.93 | 0.40 | 0.42 |
1642683 | 1642703 | 20 | 57 | 1 | 58 | 11 | 75 | 86 | 68 | 76 | 0.84 | 0.40 | 0.47 |
1642683 | 1642728 | 45 | 11 | 0 | 11 | 0 | 26 | 26 | 11 | 26 | 1.00 | 0.30 | 0.30 |
1642683 | 1642740 | 57 | 21 | 0 | 21 | 6 | 37 | 43 | 27 | 37 | 0.82 | 0.33 | 0.42 |
1642698 | 1642703 | 5 | 129 | 2 | 131 | 12 | 165 | 177 | 141 | 167 | 0.91 | 0.43 | 0.46 |
1642698 | 1642728 | 30 | 21 | 1 | 22 | 0 | 43 | 43 | 21 | 44 | 0.97 | 0.34 | 0.32 |
1642698 | 1642740 | 42 | 7 | 0 | 7 | 1 | 8 | 9 | 8 | 8 | 0.88 | 0.44 | 0.50 |
1642703 | 1642728 | 25 | 38 | 5 | 43 | 0 | 63 | 63 | 38 | 68 | 0.91 | 0.41 | 0.36 |
1642728 | 1642740 | 12 | 66 | 6 | 72 | 11 | 123 | 134 | 77 | 129 | 0.82 | 0.35 | 0.37 |