r2 Matrix (?)
CpG Pair 1 | CpG Pair 2 | Distance | TT Count | TC Count | T* Count | CT Count | CC Count | C* Count | *T Count | *C Count | R Value | mafA | mafB |
129869089 | 129869113 | 24 | 31 | 45 | 76 | 6 | 15 | 21 | 37 | 60 | 0.10 | 0.22 | 0.38 |
129869089 | 129869115 | 26 | 26 | 35 | 61 | 2 | 11 | 13 | 28 | 46 | 0.21 | 0.18 | 0.38 |
129869089 | 129869134 | 45 | 10 | 0 | 10 | 4 | 5 | 9 | 14 | 5 | 0.63 | 0.47 | 0.26 |
129869089 | 129869144 | 55 | 16 | 0 | 16 | 3 | 6 | 9 | 19 | 6 | 0.75 | 0.36 | 0.24 |
129869089 | 129869162 | 73 | 11 | 0 | 11 | 4 | 4 | 8 | 15 | 4 | 0.61 | 0.42 | 0.21 |
129869113 | 129869115 | 2 | 85 | 16 | 101 | 3 | 107 | 110 | 88 | 123 | 0.82 | 0.48 | 0.42 |
129869113 | 129869134 | 21 | 24 | 0 | 24 | 15 | 5 | 20 | 39 | 5 | 0.39 | 0.45 | 0.11 |
129869113 | 129869144 | 31 | 12 | 3 | 15 | 6 | 3 | 9 | 18 | 6 | 0.15 | 0.38 | 0.25 |
129869115 | 129869134 | 19 | 21 | 0 | 21 | 20 | 8 | 28 | 41 | 8 | 0.38 | 0.43 | 0.16 |
129869115 | 129869144 | 29 | 11 | 1 | 12 | 9 | 8 | 17 | 20 | 9 | 0.41 | 0.41 | 0.31 |
129869115 | 129869147 | 32 | 6 | 0 | 6 | 6 | 3 | 9 | 12 | 3 | 0.41 | 0.40 | 0.20 |
129869115 | 129869200 | 85 | 3 | 0 | 3 | 2 | 6 | 8 | 5 | 6 | 0.67 | 0.27 | 0.45 |
129869134 | 129869144 | 10 | 100 | 12 | 112 | 4 | 24 | 28 | 104 | 36 | 0.69 | 0.20 | 0.26 |
129869134 | 129869147 | 13 | 95 | 4 | 99 | 10 | 16 | 26 | 105 | 20 | 0.64 | 0.21 | 0.16 |
129869134 | 129869162 | 28 | 77 | 6 | 83 | 8 | 13 | 21 | 85 | 19 | 0.57 | 0.20 | 0.18 |
129869134 | 129869189 | 55 | 7 | 2 | 9 | 0 | 2 | 2 | 7 | 4 | 0.62 | 0.18 | 0.36 |
129869134 | 129869200 | 66 | 45 | 5 | 50 | 2 | 12 | 14 | 47 | 17 | 0.71 | 0.22 | 0.27 |
129869134 | 129869206 | 72 | 47 | 4 | 51 | 2 | 13 | 15 | 49 | 17 | 0.76 | 0.23 | 0.26 |
129869134 | 129869211 | 77 | 52 | 2 | 54 | 4 | 13 | 17 | 56 | 15 | 0.76 | 0.24 | 0.21 |
129869134 | 129869226 | 92 | 45 | 2 | 47 | 3 | 12 | 15 | 48 | 14 | 0.78 | 0.24 | 0.23 |
129869144 | 129869147 | 3 | 175 | 7 | 182 | 26 | 40 | 66 | 201 | 47 | 0.64 | 0.27 | 0.19 |
129869144 | 129869162 | 18 | 164 | 3 | 167 | 18 | 42 | 60 | 182 | 45 | 0.75 | 0.26 | 0.20 |
129869144 | 129869171 | 27 | 72 | 2 | 74 | 9 | 21 | 30 | 81 | 23 | 0.73 | 0.29 | 0.22 |
129869144 | 129869189 | 45 | 7 | 1 | 8 | 2 | 3 | 5 | 9 | 4 | 0.50 | 0.38 | 0.31 |
129869144 | 129869200 | 56 | 52 | 2 | 54 | 3 | 17 | 20 | 55 | 19 | 0.83 | 0.27 | 0.26 |
129869144 | 129869206 | 62 | 59 | 2 | 61 | 2 | 18 | 20 | 61 | 20 | 0.87 | 0.25 | 0.25 |
129869144 | 129869211 | 67 | 69 | 1 | 70 | 7 | 17 | 24 | 76 | 18 | 0.77 | 0.26 | 0.19 |
129869144 | 129869226 | 82 | 69 | 3 | 72 | 8 | 18 | 26 | 77 | 21 | 0.70 | 0.27 | 0.21 |
129869147 | 129869162 | 15 | 177 | 22 | 199 | 19 | 28 | 47 | 196 | 50 | 0.47 | 0.19 | 0.20 |
129869147 | 129869171 | 24 | 86 | 10 | 96 | 8 | 19 | 27 | 94 | 29 | 0.58 | 0.22 | 0.24 |
129869147 | 129869180 | 33 | 16 | 2 | 18 | 1 | 3 | 4 | 17 | 5 | 0.59 | 0.18 | 0.23 |
129869147 | 129869189 | 42 | 8 | 2 | 10 | 0 | 2 | 2 | 8 | 4 | 0.63 | 0.17 | 0.33 |
129869147 | 129869200 | 53 | 53 | 6 | 59 | 2 | 12 | 14 | 55 | 18 | 0.69 | 0.19 | 0.25 |
129869147 | 129869206 | 59 | 59 | 7 | 66 | 2 | 12 | 14 | 61 | 19 | 0.67 | 0.17 | 0.24 |
129869147 | 129869211 | 64 | 70 | 7 | 77 | 5 | 11 | 16 | 75 | 18 | 0.57 | 0.17 | 0.19 |
129869147 | 129869226 | 79 | 75 | 7 | 82 | 5 | 15 | 20 | 80 | 22 | 0.64 | 0.20 | 0.22 |
129869147 | 129869254 | 107 | 4 | 3 | 7 | 4 | 0 | 4 | 8 | 3 | -0.46 | 0.36 | 0.27 |
129869162 | 129869171 | 9 | 92 | 5 | 97 | 3 | 25 | 28 | 95 | 30 | 0.82 | 0.22 | 0.24 |
129869162 | 129869180 | 18 | 17 | 1 | 18 | 2 | 4 | 6 | 19 | 5 | 0.65 | 0.25 | 0.21 |
129869162 | 129869189 | 27 | 7 | 1 | 8 | 3 | 2 | 5 | 10 | 3 | 0.32 | 0.38 | 0.23 |
129869162 | 129869200 | 38 | 49 | 7 | 56 | 4 | 10 | 14 | 53 | 17 | 0.55 | 0.20 | 0.24 |
129869162 | 129869206 | 44 | 55 | 7 | 62 | 3 | 11 | 14 | 58 | 18 | 0.61 | 0.18 | 0.24 |
129869162 | 129869211 | 49 | 68 | 4 | 72 | 4 | 13 | 17 | 72 | 17 | 0.71 | 0.19 | 0.19 |
129869162 | 129869226 | 64 | 74 | 8 | 82 | 4 | 14 | 18 | 78 | 22 | 0.63 | 0.18 | 0.22 |
129869162 | 129869254 | 92 | 6 | 2 | 8 | 3 | 1 | 4 | 9 | 3 | 0.00 | 0.33 | 0.25 |
129869171 | 129869180 | 9 | 60 | 2 | 62 | 6 | 15 | 21 | 66 | 17 | 0.73 | 0.25 | 0.20 |
129869171 | 129869189 | 18 | 46 | 4 | 50 | 6 | 9 | 15 | 52 | 13 | 0.55 | 0.23 | 0.20 |
129869171 | 129869200 | 29 | 31 | 3 | 34 | 1 | 8 | 9 | 32 | 11 | 0.75 | 0.21 | 0.26 |
129869171 | 129869206 | 35 | 12 | 2 | 14 | 0 | 3 | 3 | 12 | 5 | 0.72 | 0.18 | 0.29 |
129869171 | 129869211 | 40 | 15 | 1 | 16 | 2 | 1 | 3 | 17 | 2 | 0.32 | 0.16 | 0.11 |
129869171 | 129869226 | 55 | 30 | 4 | 34 | 2 | 7 | 9 | 32 | 11 | 0.61 | 0.21 | 0.26 |
129869171 | 129869254 | 83 | 7 | 3 | 10 | 3 | 1 | 4 | 10 | 4 | -0.05 | 0.29 | 0.29 |
129869180 | 129869189 | 9 | 68 | 7 | 75 | 7 | 18 | 25 | 75 | 25 | 0.63 | 0.25 | 0.25 |
129869180 | 129869200 | 20 | 45 | 5 | 50 | 2 | 18 | 20 | 47 | 23 | 0.77 | 0.29 | 0.33 |
129869180 | 129869206 | 26 | 24 | 3 | 27 | 2 | 12 | 14 | 26 | 15 | 0.73 | 0.34 | 0.37 |
129869180 | 129869211 | 31 | 13 | 2 | 15 | 2 | 6 | 8 | 15 | 8 | 0.62 | 0.35 | 0.35 |
129869180 | 129869226 | 46 | 8 | 2 | 10 | 0 | 2 | 2 | 8 | 4 | 0.63 | 0.17 | 0.33 |
129869180 | 129869254 | 74 | 7 | 2 | 9 | 2 | 0 | 2 | 9 | 2 | -0.22 | 0.18 | 0.18 |
129869189 | 129869200 | 11 | 62 | 9 | 71 | 4 | 27 | 31 | 66 | 36 | 0.72 | 0.30 | 0.35 |
129869189 | 129869206 | 17 | 40 | 8 | 48 | 4 | 21 | 25 | 44 | 29 | 0.65 | 0.34 | 0.40 |
129869189 | 129869211 | 22 | 33 | 3 | 36 | 2 | 17 | 19 | 35 | 20 | 0.80 | 0.35 | 0.36 |
129869189 | 129869254 | 65 | 10 | 2 | 12 | 1 | 1 | 2 | 11 | 3 | 0.28 | 0.14 | 0.21 |
129869189 | 129869260 | 71 | 10 | 0 | 10 | 1 | 2 | 3 | 11 | 2 | 0.78 | 0.23 | 0.15 |
129869189 | 129869264 | 75 | 10 | 0 | 10 | 1 | 2 | 3 | 11 | 2 | 0.78 | 0.23 | 0.15 |
129869189 | 129869270 | 81 | 12 | 0 | 12 | 0 | 3 | 3 | 12 | 3 | 1.00 | 0.20 | 0.20 |
129869189 | 129869278 | 89 | 10 | 0 | 10 | 0 | 3 | 3 | 10 | 3 | 1.00 | 0.23 | 0.23 |
129869189 | 129869282 | 93 | 8 | 1 | 9 | 0 | 2 | 2 | 8 | 3 | 0.77 | 0.18 | 0.27 |
129869200 | 129869206 | 6 | 112 | 4 | 116 | 5 | 46 | 51 | 117 | 50 | 0.87 | 0.31 | 0.30 |
129869200 | 129869211 | 11 | 103 | 2 | 105 | 9 | 36 | 45 | 112 | 38 | 0.82 | 0.30 | 0.25 |
129869200 | 129869226 | 26 | 68 | 1 | 69 | 2 | 21 | 23 | 70 | 22 | 0.91 | 0.25 | 0.24 |
129869200 | 129869260 | 60 | 9 | 0 | 9 | 2 | 2 | 4 | 11 | 2 | 0.64 | 0.31 | 0.15 |
129869200 | 129869264 | 64 | 9 | 0 | 9 | 2 | 2 | 4 | 11 | 2 | 0.64 | 0.31 | 0.15 |
129869200 | 129869270 | 70 | 11 | 0 | 11 | 3 | 4 | 7 | 14 | 4 | 0.67 | 0.39 | 0.22 |
129869200 | 129869278 | 78 | 10 | 0 | 10 | 2 | 4 | 6 | 12 | 4 | 0.74 | 0.38 | 0.25 |
129869200 | 129869282 | 82 | 9 | 0 | 9 | 0 | 5 | 5 | 9 | 5 | 1.00 | 0.36 | 0.36 |
129869206 | 129869211 | 5 | 118 | 5 | 123 | 11 | 37 | 48 | 129 | 42 | 0.76 | 0.28 | 0.25 |
129869206 | 129869226 | 20 | 82 | 3 | 85 | 5 | 19 | 24 | 87 | 22 | 0.78 | 0.22 | 0.20 |
129869206 | 129869260 | 54 | 9 | 1 | 10 | 1 | 1 | 2 | 10 | 2 | 0.40 | 0.17 | 0.17 |
129869206 | 129869264 | 58 | 9 | 1 | 10 | 1 | 1 | 2 | 10 | 2 | 0.40 | 0.17 | 0.17 |
129869206 | 129869270 | 64 | 12 | 2 | 14 | 3 | 2 | 5 | 15 | 4 | 0.28 | 0.26 | 0.21 |
129869206 | 129869278 | 72 | 11 | 2 | 13 | 2 | 2 | 4 | 13 | 4 | 0.35 | 0.24 | 0.24 |
129869206 | 129869282 | 76 | 10 | 2 | 12 | 0 | 3 | 3 | 10 | 5 | 0.71 | 0.20 | 0.33 |
129869211 | 129869226 | 15 | 100 | 6 | 106 | 4 | 22 | 26 | 104 | 28 | 0.77 | 0.20 | 0.21 |
129869211 | 129869270 | 59 | 13 | 0 | 13 | 1 | 5 | 6 | 14 | 5 | 0.88 | 0.32 | 0.26 |
129869211 | 129869278 | 67 | 12 | 0 | 12 | 0 | 5 | 5 | 12 | 5 | 1.00 | 0.29 | 0.29 |
129869211 | 129869282 | 71 | 9 | 2 | 11 | 1 | 3 | 4 | 10 | 5 | 0.53 | 0.27 | 0.33 |
129869211 | 129869288 | 77 | 5 | 2 | 7 | 1 | 3 | 4 | 6 | 5 | 0.45 | 0.36 | 0.45 |
129869226 | 129869254 | 28 | 15 | 9 | 24 | 5 | 1 | 6 | 20 | 10 | -0.18 | 0.20 | 0.33 |
129869254 | 129869260 | 6 | 14 | 0 | 14 | 0 | 2 | 2 | 14 | 2 | 1.00 | 0.12 | 0.12 |
129869254 | 129869264 | 10 | 14 | 0 | 14 | 0 | 2 | 2 | 14 | 2 | 1.00 | 0.12 | 0.12 |
129869254 | 129869270 | 16 | 11 | 0 | 11 | 0 | 2 | 2 | 11 | 2 | 1.00 | 0.15 | 0.15 |
129869260 | 129869264 | 4 | 14 | 0 | 14 | 0 | 5 | 5 | 14 | 5 | 1.00 | 0.26 | 0.26 |
129869260 | 129869270 | 10 | 12 | 0 | 12 | 0 | 5 | 5 | 12 | 5 | 1.00 | 0.29 | 0.29 |
129869260 | 129869278 | 18 | 9 | 0 | 9 | 0 | 5 | 5 | 9 | 5 | 1.00 | 0.36 | 0.36 |
129869260 | 129869282 | 22 | 8 | 0 | 8 | 0 | 4 | 4 | 8 | 4 | 1.00 | 0.33 | 0.33 |
129869264 | 129869270 | 6 | 11 | 0 | 11 | 0 | 5 | 5 | 11 | 5 | 1.00 | 0.31 | 0.31 |
129869264 | 129869278 | 14 | 8 | 0 | 8 | 0 | 5 | 5 | 8 | 5 | 1.00 | 0.38 | 0.38 |
129869264 | 129869282 | 18 | 7 | 0 | 7 | 0 | 4 | 4 | 7 | 4 | 1.00 | 0.36 | 0.36 |
129869270 | 129869278 | 8 | 16 | 0 | 16 | 0 | 9 | 9 | 16 | 9 | 1.00 | 0.36 | 0.36 |
129869270 | 129869282 | 12 | 13 | 2 | 15 | 1 | 7 | 8 | 14 | 9 | 0.72 | 0.35 | 0.39 |
129869270 | 129869288 | 18 | 6 | 2 | 8 | 1 | 7 | 8 | 7 | 9 | 0.63 | 0.50 | 0.44 |
129869278 | 129869282 | 4 | 14 | 2 | 16 | 1 | 7 | 8 | 15 | 9 | 0.73 | 0.33 | 0.38 |
129869278 | 129869288 | 10 | 7 | 2 | 9 | 1 | 7 | 8 | 8 | 9 | 0.65 | 0.47 | 0.47 |
129869282 | 129869288 | 6 | 8 | 0 | 8 | 0 | 10 | 10 | 8 | 10 | 1.00 | 0.44 | 0.44 |