r2 Matrix (?)
CpG Pair 1 | CpG Pair 2 | Distance | TT Count | TC Count | T* Count | CT Count | CC Count | C* Count | *T Count | *C Count | R Value | mafA | mafB |
1887395 | 1887398 | 3 | 15 | 6 | 21 | 6 | 40 | 46 | 21 | 46 | 0.58 | 0.31 | 0.31 |
1887395 | 1887410 | 15 | 11 | 7 | 18 | 11 | 26 | 37 | 22 | 33 | 0.30 | 0.33 | 0.40 |
1887395 | 1887425 | 30 | 0 | 4 | 4 | 2 | 8 | 10 | 2 | 12 | -0.26 | 0.29 | 0.14 |
1887395 | 1887461 | 66 | 3 | 7 | 10 | 5 | 10 | 15 | 8 | 17 | -0.04 | 0.40 | 0.32 |
1887395 | 1887475 | 80 | 5 | 4 | 9 | 5 | 13 | 18 | 10 | 17 | 0.27 | 0.33 | 0.37 |
1887395 | 1887488 | 93 | 4 | 1 | 5 | 2 | 8 | 10 | 6 | 9 | 0.58 | 0.33 | 0.40 |
1887398 | 1887410 | 12 | 16 | 4 | 20 | 11 | 43 | 54 | 27 | 47 | 0.55 | 0.27 | 0.36 |
1887398 | 1887425 | 27 | 1 | 3 | 4 | 4 | 25 | 29 | 5 | 28 | 0.10 | 0.12 | 0.15 |
1887398 | 1887461 | 63 | 3 | 8 | 11 | 6 | 15 | 21 | 9 | 23 | -0.01 | 0.34 | 0.28 |
1887398 | 1887475 | 77 | 3 | 7 | 10 | 10 | 19 | 29 | 13 | 26 | -0.04 | 0.26 | 0.33 |
1887398 | 1887488 | 90 | 3 | 2 | 5 | 3 | 14 | 17 | 6 | 16 | 0.40 | 0.23 | 0.27 |
1887398 | 1887494 | 96 | 1 | 2 | 3 | 2 | 10 | 12 | 3 | 12 | 0.17 | 0.20 | 0.20 |
1887398 | 1887499 | 101 | 1 | 1 | 2 | 1 | 8 | 9 | 2 | 9 | 0.39 | 0.18 | 0.18 |
1887410 | 1887425 | 15 | 6 | 13 | 19 | 17 | 40 | 57 | 23 | 53 | 0.02 | 0.25 | 0.30 |
1887410 | 1887434 | 24 | 5 | 9 | 14 | 15 | 17 | 32 | 20 | 26 | -0.10 | 0.30 | 0.43 |
1887410 | 1887461 | 51 | 5 | 9 | 14 | 3 | 17 | 20 | 8 | 26 | 0.24 | 0.41 | 0.24 |
1887410 | 1887475 | 65 | 5 | 11 | 16 | 10 | 31 | 41 | 15 | 42 | 0.07 | 0.28 | 0.26 |
1887410 | 1887488 | 78 | 1 | 7 | 8 | 12 | 22 | 34 | 13 | 29 | -0.19 | 0.19 | 0.31 |
1887410 | 1887494 | 84 | 2 | 4 | 6 | 8 | 20 | 28 | 10 | 24 | 0.04 | 0.18 | 0.29 |
1887410 | 1887499 | 89 | 1 | 3 | 4 | 6 | 13 | 19 | 7 | 16 | -0.05 | 0.17 | 0.30 |
1887410 | 1887506 | 96 | 1 | 3 | 4 | 1 | 9 | 10 | 2 | 12 | 0.19 | 0.29 | 0.14 |
1887425 | 1887434 | 9 | 24 | 9 | 33 | 7 | 38 | 45 | 31 | 47 | 0.58 | 0.42 | 0.40 |
1887425 | 1887447 | 22 | 10 | 1 | 11 | 6 | 13 | 19 | 16 | 14 | 0.57 | 0.37 | 0.47 |
1887425 | 1887461 | 36 | 1 | 5 | 6 | 2 | 8 | 10 | 3 | 13 | -0.04 | 0.38 | 0.19 |
1887425 | 1887475 | 50 | 3 | 15 | 18 | 6 | 20 | 26 | 9 | 35 | -0.08 | 0.41 | 0.20 |
1887425 | 1887488 | 63 | 10 | 8 | 18 | 5 | 20 | 25 | 15 | 28 | 0.37 | 0.42 | 0.35 |
1887425 | 1887494 | 69 | 11 | 7 | 18 | 6 | 18 | 24 | 17 | 25 | 0.36 | 0.43 | 0.40 |
1887425 | 1887499 | 74 | 11 | 1 | 12 | 3 | 16 | 19 | 14 | 17 | 0.74 | 0.39 | 0.45 |
1887425 | 1887506 | 81 | 5 | 2 | 7 | 1 | 12 | 13 | 6 | 14 | 0.66 | 0.35 | 0.30 |
1887434 | 1887447 | 13 | 15 | 2 | 17 | 7 | 21 | 28 | 22 | 23 | 0.61 | 0.38 | 0.49 |
1887434 | 1887461 | 27 | 1 | 7 | 8 | 2 | 12 | 14 | 3 | 19 | -0.03 | 0.36 | 0.14 |
1887434 | 1887475 | 41 | 2 | 13 | 15 | 1 | 11 | 12 | 3 | 24 | 0.08 | 0.44 | 0.11 |
1887434 | 1887488 | 54 | 12 | 6 | 18 | 2 | 13 | 15 | 14 | 19 | 0.54 | 0.45 | 0.42 |
1887434 | 1887494 | 60 | 11 | 7 | 18 | 4 | 11 | 15 | 15 | 18 | 0.34 | 0.45 | 0.45 |
1887434 | 1887499 | 65 | 13 | 0 | 13 | 1 | 11 | 12 | 14 | 11 | 0.92 | 0.48 | 0.44 |
1887434 | 1887506 | 72 | 5 | 1 | 6 | 1 | 8 | 9 | 6 | 9 | 0.72 | 0.40 | 0.40 |
1887447 | 1887461 | 14 | 6 | 9 | 15 | 2 | 23 | 25 | 8 | 32 | 0.39 | 0.38 | 0.20 |
1887447 | 1887488 | 41 | 5 | 4 | 9 | 2 | 1 | 3 | 7 | 5 | -0.10 | 0.25 | 0.42 |
1887447 | 1887494 | 47 | 7 | 3 | 10 | 1 | 3 | 4 | 8 | 6 | 0.41 | 0.29 | 0.43 |
1887447 | 1887499 | 52 | 8 | 1 | 9 | 0 | 4 | 4 | 8 | 5 | 0.84 | 0.31 | 0.38 |
1887447 | 1887506 | 59 | 5 | 1 | 6 | 0 | 5 | 5 | 5 | 6 | 0.83 | 0.45 | 0.45 |
1887461 | 1887475 | 14 | 7 | 10 | 17 | 7 | 45 | 52 | 14 | 55 | 0.30 | 0.25 | 0.20 |
1887461 | 1887488 | 27 | 2 | 3 | 5 | 11 | 14 | 25 | 13 | 17 | -0.03 | 0.17 | 0.43 |
1887461 | 1887494 | 33 | 2 | 0 | 2 | 4 | 11 | 15 | 6 | 11 | 0.49 | 0.12 | 0.35 |
1887461 | 1887535 | 74 | 3 | 1 | 4 | 1 | 6 | 7 | 4 | 7 | 0.61 | 0.36 | 0.36 |
1887461 | 1887538 | 77 | 3 | 1 | 4 | 1 | 6 | 7 | 4 | 7 | 0.61 | 0.36 | 0.36 |
1887475 | 1887488 | 13 | 5 | 9 | 14 | 22 | 38 | 60 | 27 | 47 | -0.01 | 0.19 | 0.36 |
1887475 | 1887494 | 19 | 5 | 5 | 10 | 15 | 36 | 51 | 20 | 41 | 0.16 | 0.16 | 0.33 |
1887475 | 1887499 | 24 | 5 | 1 | 6 | 13 | 19 | 32 | 18 | 20 | 0.31 | 0.16 | 0.47 |
1887475 | 1887506 | 31 | 2 | 2 | 4 | 6 | 11 | 17 | 8 | 13 | 0.12 | 0.19 | 0.38 |
1887475 | 1887535 | 60 | 4 | 0 | 4 | 4 | 9 | 13 | 8 | 9 | 0.59 | 0.24 | 0.47 |
1887475 | 1887538 | 63 | 4 | 1 | 5 | 4 | 9 | 13 | 8 | 10 | 0.44 | 0.28 | 0.44 |
1887475 | 1887552 | 77 | 3 | 1 | 4 | 3 | 9 | 12 | 6 | 10 | 0.45 | 0.25 | 0.38 |
1887488 | 1887494 | 6 | 30 | 6 | 36 | 8 | 64 | 72 | 38 | 70 | 0.71 | 0.33 | 0.35 |
1887488 | 1887499 | 11 | 21 | 6 | 27 | 12 | 46 | 58 | 33 | 52 | 0.55 | 0.32 | 0.39 |
1887488 | 1887506 | 18 | 14 | 8 | 22 | 2 | 43 | 45 | 16 | 51 | 0.65 | 0.33 | 0.24 |
1887488 | 1887515 | 27 | 7 | 7 | 14 | 1 | 29 | 30 | 8 | 36 | 0.56 | 0.32 | 0.18 |
1887488 | 1887535 | 47 | 4 | 3 | 7 | 1 | 4 | 5 | 5 | 7 | 0.37 | 0.42 | 0.42 |
1887488 | 1887538 | 50 | 4 | 3 | 7 | 1 | 5 | 6 | 5 | 8 | 0.41 | 0.46 | 0.38 |
1887488 | 1887552 | 64 | 6 | 1 | 7 | 1 | 7 | 8 | 7 | 8 | 0.73 | 0.47 | 0.47 |
1887488 | 1887561 | 73 | 7 | 2 | 9 | 0 | 9 | 9 | 7 | 11 | 0.80 | 0.50 | 0.39 |
1887488 | 1887567 | 79 | 2 | 8 | 10 | 2 | 17 | 19 | 4 | 25 | 0.13 | 0.34 | 0.14 |
1887488 | 1887571 | 83 | 4 | 3 | 7 | 5 | 20 | 25 | 9 | 23 | 0.34 | 0.22 | 0.28 |
1887488 | 1887597 | 109 | 0 | 4 | 4 | 3 | 19 | 22 | 3 | 23 | -0.15 | 0.15 | 0.12 |
1887488 | 1887602 | 114 | 0 | 2 | 2 | 2 | 12 | 14 | 2 | 14 | -0.14 | 0.12 | 0.12 |
1887494 | 1887499 | 5 | 22 | 11 | 33 | 16 | 51 | 67 | 38 | 62 | 0.41 | 0.33 | 0.38 |
1887494 | 1887506 | 12 | 15 | 14 | 29 | 5 | 48 | 53 | 20 | 62 | 0.47 | 0.35 | 0.24 |
1887494 | 1887515 | 21 | 10 | 11 | 21 | 1 | 37 | 38 | 11 | 48 | 0.55 | 0.36 | 0.19 |
1887494 | 1887535 | 41 | 4 | 2 | 6 | 1 | 5 | 6 | 5 | 7 | 0.51 | 0.50 | 0.42 |
1887494 | 1887538 | 44 | 4 | 2 | 6 | 1 | 6 | 7 | 5 | 8 | 0.54 | 0.46 | 0.38 |
1887494 | 1887552 | 58 | 6 | 1 | 7 | 1 | 7 | 8 | 7 | 8 | 0.73 | 0.47 | 0.47 |
1887494 | 1887561 | 67 | 8 | 3 | 11 | 0 | 12 | 12 | 8 | 15 | 0.76 | 0.48 | 0.35 |
1887494 | 1887567 | 73 | 3 | 10 | 13 | 3 | 19 | 22 | 6 | 29 | 0.12 | 0.37 | 0.17 |
1887494 | 1887571 | 77 | 5 | 8 | 13 | 7 | 20 | 27 | 12 | 28 | 0.13 | 0.33 | 0.30 |
1887499 | 1887506 | 7 | 26 | 11 | 37 | 2 | 61 | 63 | 28 | 72 | 0.72 | 0.37 | 0.28 |
1887499 | 1887515 | 16 | 15 | 15 | 30 | 0 | 47 | 47 | 15 | 62 | 0.62 | 0.39 | 0.19 |
1887499 | 1887561 | 62 | 7 | 0 | 7 | 0 | 14 | 14 | 7 | 14 | 1.00 | 0.33 | 0.33 |
1887499 | 1887567 | 68 | 4 | 8 | 12 | 1 | 24 | 25 | 5 | 32 | 0.40 | 0.32 | 0.14 |
1887499 | 1887571 | 72 | 12 | 2 | 14 | 6 | 28 | 34 | 18 | 30 | 0.64 | 0.29 | 0.38 |
1887506 | 1887515 | 9 | 13 | 8 | 21 | 3 | 57 | 60 | 16 | 65 | 0.63 | 0.26 | 0.20 |
1887506 | 1887561 | 55 | 5 | 1 | 6 | 1 | 13 | 14 | 6 | 14 | 0.76 | 0.30 | 0.30 |
1887506 | 1887567 | 61 | 3 | 7 | 10 | 2 | 25 | 27 | 5 | 32 | 0.29 | 0.27 | 0.14 |
1887506 | 1887571 | 65 | 10 | 2 | 12 | 7 | 31 | 38 | 17 | 33 | 0.58 | 0.24 | 0.34 |
1887515 | 1887561 | 46 | 3 | 0 | 3 | 1 | 12 | 13 | 4 | 12 | 0.83 | 0.19 | 0.25 |
1887515 | 1887567 | 52 | 2 | 5 | 7 | 3 | 22 | 25 | 5 | 27 | 0.19 | 0.22 | 0.16 |
1887515 | 1887571 | 56 | 7 | 1 | 8 | 10 | 28 | 38 | 17 | 29 | 0.48 | 0.17 | 0.37 |
1887535 | 1887538 | 3 | 12 | 1 | 13 | 2 | 33 | 35 | 14 | 34 | 0.85 | 0.27 | 0.29 |
1887535 | 1887552 | 17 | 10 | 1 | 11 | 3 | 25 | 28 | 13 | 26 | 0.77 | 0.28 | 0.33 |
1887535 | 1887561 | 26 | 6 | 0 | 6 | 2 | 14 | 16 | 8 | 14 | 0.81 | 0.27 | 0.36 |
1887535 | 1887567 | 32 | 1 | 1 | 2 | 1 | 11 | 12 | 2 | 12 | 0.42 | 0.14 | 0.14 |
1887535 | 1887597 | 62 | 2 | 1 | 3 | 0 | 11 | 11 | 2 | 12 | 0.78 | 0.21 | 0.14 |
1887535 | 1887607 | 72 | 1 | 2 | 3 | 1 | 9 | 10 | 2 | 11 | 0.27 | 0.23 | 0.15 |
1887538 | 1887552 | 14 | 11 | 1 | 12 | 2 | 30 | 32 | 13 | 31 | 0.83 | 0.27 | 0.30 |
1887538 | 1887561 | 23 | 7 | 0 | 7 | 2 | 18 | 20 | 9 | 18 | 0.84 | 0.26 | 0.33 |
1887538 | 1887567 | 29 | 1 | 1 | 2 | 1 | 16 | 17 | 2 | 17 | 0.44 | 0.11 | 0.11 |
1887538 | 1887597 | 59 | 2 | 1 | 3 | 1 | 10 | 11 | 3 | 11 | 0.58 | 0.21 | 0.21 |
1887538 | 1887607 | 69 | 1 | 2 | 3 | 1 | 10 | 11 | 2 | 12 | 0.28 | 0.21 | 0.14 |
1887552 | 1887561 | 9 | 17 | 3 | 20 | 2 | 30 | 32 | 19 | 33 | 0.80 | 0.38 | 0.37 |
1887552 | 1887567 | 15 | 8 | 6 | 14 | 1 | 28 | 29 | 9 | 34 | 0.62 | 0.33 | 0.21 |
1887552 | 1887571 | 19 | 7 | 4 | 11 | 3 | 19 | 22 | 10 | 23 | 0.51 | 0.33 | 0.30 |
1887552 | 1887597 | 45 | 2 | 1 | 3 | 1 | 8 | 9 | 3 | 9 | 0.56 | 0.25 | 0.25 |
1887552 | 1887599 | 47 | 1 | 2 | 3 | 1 | 10 | 11 | 2 | 12 | 0.28 | 0.21 | 0.14 |
1887552 | 1887602 | 50 | 1 | 2 | 3 | 1 | 9 | 10 | 2 | 11 | 0.27 | 0.23 | 0.15 |
1887552 | 1887605 | 53 | 1 | 2 | 3 | 1 | 10 | 11 | 2 | 12 | 0.28 | 0.21 | 0.14 |
1887552 | 1887607 | 55 | 1 | 2 | 3 | 2 | 10 | 12 | 3 | 12 | 0.17 | 0.20 | 0.20 |
1887561 | 1887567 | 6 | 12 | 7 | 19 | 2 | 50 | 52 | 14 | 57 | 0.66 | 0.27 | 0.20 |
1887561 | 1887571 | 10 | 12 | 5 | 17 | 4 | 40 | 44 | 16 | 45 | 0.63 | 0.28 | 0.26 |
1887567 | 1887571 | 4 | 12 | 7 | 19 | 13 | 60 | 73 | 25 | 67 | 0.41 | 0.21 | 0.27 |
1887567 | 1887597 | 30 | 3 | 3 | 6 | 2 | 24 | 26 | 5 | 27 | 0.46 | 0.19 | 0.16 |
1887571 | 1887597 | 26 | 5 | 13 | 18 | 4 | 33 | 37 | 9 | 46 | 0.21 | 0.33 | 0.16 |
1887571 | 1887599 | 28 | 2 | 10 | 12 | 3 | 29 | 32 | 5 | 39 | 0.10 | 0.27 | 0.11 |
1887571 | 1887605 | 34 | 1 | 6 | 7 | 1 | 6 | 7 | 2 | 12 | 0.00 | 0.50 | 0.14 |
1887626 | 1887631 | 5 | 6 | 4 | 10 | 0 | 7 | 7 | 6 | 11 | 0.62 | 0.41 | 0.35 |
1887654 | 1887657 | 3 | 3 | 0 | 3 | 0 | 13 | 13 | 3 | 13 | 1.00 | 0.19 | 0.19 |
1887654 | 1887659 | 5 | 3 | 0 | 3 | 0 | 10 | 10 | 3 | 10 | 1.00 | 0.23 | 0.23 |
1887654 | 1887667 | 13 | 2 | 0 | 2 | 1 | 8 | 9 | 3 | 8 | 0.77 | 0.18 | 0.27 |
1887657 | 1887659 | 2 | 4 | 0 | 4 | 0 | 10 | 10 | 4 | 10 | 1.00 | 0.29 | 0.29 |
1887657 | 1887667 | 10 | 2 | 1 | 3 | 1 | 8 | 9 | 3 | 9 | 0.56 | 0.25 | 0.25 |
1887659 | 1887667 | 8 | 2 | 1 | 3 | 2 | 8 | 10 | 4 | 9 | 0.43 | 0.23 | 0.31 |
1887675 | 1887678 | 3 | 4 | 0 | 4 | 7 | 3 | 10 | 11 | 3 | 0.33 | 0.29 | 0.21 |
1887729 | 1887741 | 12 | 3 | 0 | 3 | 2 | 6 | 8 | 5 | 6 | 0.67 | 0.27 | 0.45 |
1887729 | 1887745 | 16 | 3 | 0 | 3 | 0 | 8 | 8 | 3 | 8 | 1.00 | 0.27 | 0.27 |
1887741 | 1887745 | 4 | 4 | 3 | 7 | 1 | 10 | 11 | 5 | 13 | 0.52 | 0.39 | 0.28 |
1887769 | 1887771 | 2 | 7 | 0 | 7 | 4 | 4 | 8 | 11 | 4 | 0.56 | 0.47 | 0.27 |